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authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2023-11-30 13:20:05 +0100
committerRicardo Wurmus <rekado@elephly.net>2023-12-11 06:27:42 +0100
commit9535cee6cdf259f898fae043564038f53a809a9e (patch)
tree9520748dadc28100bf56e63a15bc4547ce845f35 /gnu
parent65334547674bdaeb75eb37ffbe23ba6f9fd486b1 (diff)
downloadguix-9535cee6cdf259f898fae043564038f53a809a9e.tar.gz
gnu: Add r-polyester.
* gnu/packages/bioconductor.scm (r-polyester): New variable.

Change-Id: I415089cda3214ec04402fc6f4505fa868414d0e2
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm28
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7ff364ee55..4f15213481 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9592,6 +9592,34 @@ package contains functions for combining the results of multiple runs of gene
 set analyses.")
     (license license:gpl2+)))
 
+(define-public r-polyester
+  (package
+    (name "r-polyester")
+    (version "1.38.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "polyester" version))
+       (sha256
+        (base32 "1iycdxj0jhh2faclfzflp2cjc2zmxmhy03avv75h0qg3j5kf35l4"))))
+    (properties `((upstream-name . "polyester")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-biostrings
+           r-iranges
+           r-limma
+           r-logspline
+           r-s4vectors
+           r-zlibbioc))
+    (native-inputs (list r-knitr))
+    (home-page "https://bioconductor.org/packages/polyester")
+    (synopsis "Simulate RNA-seq reads")
+    (description
+     "The polyester package simulates RNA-seq reads from differential expression
+experiments with replicates.  The reads can then be aligned and used to perform
+comparisons of methods for differential expression.")
+    (license license:artistic2.0)))
+
 (define-public r-powertcr
   (package
     (name "r-powertcr")