diff options
| author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2019-01-09 16:47:51 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-01-09 17:13:52 +0100 |
| commit | fe4e9f03492521f641e326cb21108367a44b1a63 (patch) | |
| tree | e5509cc78ff946e2342163e2a6cb54740c8ea532 /gnu | |
| parent | e50722c8e67994b5d24843c6920bb01b9e96bddb (diff) | |
| download | guix-fe4e9f03492521f641e326cb21108367a44b1a63.tar.gz | |
gnu: Add r-rbamtools.
* gnu/packages/cran.scm (r-rbamtools): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/cran.scm | 22 |
1 files changed, 22 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index dd924a1ca1..e10465bb46 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -10148,3 +10148,25 @@ of Schaefer and Strimmer (2005a,b,c) and Opgen-Rhein and Strimmer (2006, 2007) for learning large-scale gene association networks (including assignment of putative directions).") (license license:gpl3+))) + +(define-public r-rbamtools + (package + (name "r-rbamtools") + (version "2.16.11.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "rbamtools" version)) + (sha256 + (base32 + "0gzkb1xyrkriv45wq8gv7qfwjslnvwkfkk5jjc4wg5kmm0ydpdzj")))) + (build-system r-build-system) + (inputs `(("zlib" ,zlib))) + (propagated-inputs + `(("r-refgenome" ,r-refgenome))) + (home-page "https://cran.r-project.org/web/packages/rbamtools") + (synopsis "Read and write BAM (binary alignment) files") + (description + "This package provides an R interface to functions of the SAMtools +library.") + (license license:artistic2.0))) |