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| author | Gábor Boskovits <boskovits@gmail.com> | 2018-07-26 12:42:59 +0200 |
|---|---|---|
| committer | Gábor Boskovits <boskovits@gmail.com> | 2018-07-26 12:46:50 +0200 |
| commit | d60772dcdd55c0f8e236d40b76eb06eab790ab77 (patch) | |
| tree | e127069600668287eb88e866785c82c5b312604d /gnu | |
| parent | bca72b39c7548ac861d904f6230ef2c3a0fb0110 (diff) | |
| download | guix-d60772dcdd55c0f8e236d40b76eb06eab790ab77.tar.gz | |
gnu: java-picard: Fix manifest.
* gnu/packages/bioinformatics.scm (java-picard)[arguments]: Adjust phase 'edit-classpath-in-manifest for the new manifest generation code.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 7 |
1 files changed, 6 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 245e7dd564..73cca16717 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10,6 +10,7 @@ ;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net> ;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com> +;;; Copyright © 2018 Gábor Boskovits <boskovits@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -3240,12 +3241,16 @@ VCF.") (msg (format #f "\ Class-Path: /~a \ - ~a/share/java/htsjdk.jar${line.separator}" + ~a/share/java/htsjdk.jar${line.separator}${line.separator}" ;; maximum line length is 70 (string-tabulate (const #\b) 57) (assoc-ref inputs "java-htsjdk")))) (if (member "manifest" name) `(,tag ,@kids + (replaceregexp + (@ (file "${manifest.file}") + (match "\\r\\n\\r\\n") + (replace "${line.separator}"))) (echo (@ (message ,msg) (file "${manifest.file}") |