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| author | Ricardo Wurmus <rekado@elephly.net> | 2022-09-29 23:17:19 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-09-29 23:21:16 +0200 |
| commit | 1ee2d117d8fa9e2e0d4ec46cc5555497bb5e6337 (patch) | |
| tree | f7b1e46cf4455bbc895861d6dab7ebea540e1b04 /gnu | |
| parent | 4244f5e9a7be02b67ba2cf76f8a67da221349bd3 (diff) | |
| download | guix-1ee2d117d8fa9e2e0d4ec46cc5555497bb5e6337.tar.gz | |
gnu: blast+: Build reproducibly.
Fixes <https://issues.guix.gnu.org/42141>. * gnu/packages/bioinformatics.scm (blast+)[source]: Do not record kernel version and use fix set of random numbers.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 22 |
1 files changed, 21 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a034bf134e..ca341a45a7 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1656,7 +1656,27 @@ package provides command line tools using the Bio++ library.") ;; Remove useless msbuild directory (delete-file-recursively "c++/src/build-system/project_tree_builder/msbuild") - #t)))) + + ;; Build reproducibly. + ;; Do not record the kernel version + (substitute* "c++/src/build-system/configure" + (("kver=.*") "kver=\"\"")) + ;; Do not generate random numbers. + (substitute* "c++/scripts/common/impl/define_random_macros.sh" + (("#define NCBI_RANDOM_VALUE_MAX 0xffffffffu" m) + (string-append m " +#define NCBI_RANDOM_VALUE_0 2845495105u +#define NCBI_RANDOM_VALUE_1 2158634051u +#define NCBI_RANDOM_VALUE_2 4072202242u +#define NCBI_RANDOM_VALUE_3 902228395u +#define NCBI_RANDOM_VALUE_4 1353323915u +#define NCBI_RANDOM_VALUE_5 574823513u +#define NCBI_RANDOM_VALUE_6 4119501261u +#define NCBI_RANDOM_VALUE_7 2477640938u +#define NCBI_RANDOM_VALUE_8 2776595395u +#define NCBI_RANDOM_VALUE_9 270550684u +")) + (("cksum") "cksum >/dev/null")))))) (build-system gnu-build-system) (arguments `(;; There are two(!) tests for this massive library, and both fail with |