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author | Ricardo Wurmus <rekado@elephly.net> | 2019-12-13 13:31:20 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2019-12-13 22:41:36 +0100 |
commit | db07641a676cf057597fb2e08bac7e391cb846d6 (patch) | |
tree | 15e2acfd0a953a3ab3fe3b095c0d98e6115b885c /gnu | |
parent | e44c4cd73cfb256c97a0f14f8b3731b35b024dd8 (diff) | |
download | guix-db07641a676cf057597fb2e08bac7e391cb846d6.tar.gz |
gnu: Add r-bios2cor.
* gnu/packages/cran.scm (r-bios2cor): New variable.
Diffstat (limited to 'gnu')
-rw-r--r-- | gnu/packages/cran.scm | 33 |
1 files changed, 33 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 1c3d40d76c..d6013d3b9f 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -16044,3 +16044,36 @@ In addition, various utility functions are provided to enable the statistical and graphical power of the R environment to work with biological sequence and structural data.") (license license:gpl2+))) + +(define-public r-bios2cor + (package + (name "r-bios2cor") + (version "2.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "Bios2cor" version)) + (sha256 + (base32 + "1rrz0vs6wbkwys3l5jv1rdnlhyb4r1q9pv7jlnmsx6c1b4f4vz5n")))) + (properties `((upstream-name . "Bios2cor"))) + (build-system r-build-system) + (propagated-inputs + `(("r-bigmemory" ,r-bigmemory) + ("r-bio3d" ,r-bio3d) + ("r-circular" ,r-circular) + ("r-igraph" ,r-igraph))) + (home-page "https://cran.r-project.org/web/packages/Bios2cor/") + (synopsis "From biological sequences and simulations to correlation analysis") + (description + "This package provides utilities for computation and analysis of +correlation/covariation in multiple sequence alignments and in side chain +motions during molecular dynamics simulations. Features include the +computation of correlation/covariation scores using a variety of scoring +functions between either sequence positions in alignments or side chain +dihedral angles in molecular dynamics simulations and utilities to analyze the +correlation/covariation matrix through a variety of tools including network +representation and principal components analysis. In addition, several +utility functions are based on the R graphical environment to provide friendly +tools for help in data interpretation.") + (license license:gpl2+))) |