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-rw-r--r--Makefile.am1
-rw-r--r--gnu/local.mk2
-rw-r--r--gnu/packages/aux-files/emacs/comp-integrity.el132
-rw-r--r--gnu/packages/dictionaries.scm8
-rw-r--r--gnu/packages/emacs-xyz.scm47
-rw-r--r--gnu/packages/emacs.scm30
-rw-r--r--gnu/packages/guile-xyz.scm6
-rw-r--r--gnu/packages/language.scm6
-rw-r--r--gnu/packages/mail.scm30
-rw-r--r--gnu/packages/patches/emacs-disable-jit-compilation.patch19
-rw-r--r--gnu/packages/patches/emacs-native-comp-fix-filenames.patch338
-rw-r--r--gnu/packages/xorg.scm13
-rw-r--r--guix/build/emacs-build-system.scm85
-rw-r--r--guix/build/emacs-utils.scm15
14 files changed, 613 insertions, 119 deletions
diff --git a/Makefile.am b/Makefile.am
index 16bcb667a4..1c5688ac13 100644
--- a/Makefile.am
+++ b/Makefile.am
@@ -422,6 +422,7 @@ dist_noinst_DATA =				\
 # Auxiliary files for packages.
 AUX_FILES =						\
   gnu/packages/aux-files/chromium/master-preferences.json		\
+  gnu/packages/aux-files/emacs/comp-integrity.el		\
   gnu/packages/aux-files/emacs/guix-emacs.el		\
   gnu/packages/aux-files/findclass.php			\
   gnu/packages/aux-files/guix.vim			\
diff --git a/gnu/local.mk b/gnu/local.mk
index 7f1006010b..b6adbe2b0d 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -1127,6 +1127,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/emacs-all-the-icons-remove-duplicate-rs.patch	\
   %D%/packages/patches/emacs-deferred-fix-number-of-arguments.patch	\
   %D%/packages/patches/emacs-elpy-dup-test-name.patch		\
+  %D%/packages/patches/emacs-disable-jit-compilation.patch			\
   %D%/packages/patches/emacs-exec-path.patch			\
   %D%/packages/patches/emacs-fix-scheme-indent-function.patch	\
   %D%/packages/patches/emacs-git-email-missing-parens.patch	\
@@ -1136,6 +1137,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/emacs-kv-fix-tests.patch	\
   %D%/packages/patches/emacs-lispy-fix-thread-last-test.patch   \
   %D%/packages/patches/emacs-native-comp-driver-options.patch   \
+  %D%/packages/patches/emacs-native-comp-fix-filenames.patch   \
   %D%/packages/patches/emacs-next-exec-path.patch   \
   %D%/packages/patches/emacs-next-native-comp-driver-options.patch   \
   %D%/packages/patches/emacs-pasp-mode-quote-file-names.patch  \
diff --git a/gnu/packages/aux-files/emacs/comp-integrity.el b/gnu/packages/aux-files/emacs/comp-integrity.el
new file mode 100644
index 0000000000..abe7e7c0c9
--- /dev/null
+++ b/gnu/packages/aux-files/emacs/comp-integrity.el
@@ -0,0 +1,132 @@
+(require 'ert)
+
+(eval-when-compile
+  (require 'help-fns)
+
+  (defmacro expect-help (fun result &optional feature)
+    `(progn
+       (eval-when-compile (when ',feature
+                            (require ',feature)))
+
+       (ert-deftest ,(intern (concat "expect-" (symbol-name fun)
+                                     "-" (symbol-name result)))
+           ()
+           (should
+            (eq ',result
+                (let ((desc (substring-no-properties
+                             (with-output-to-string
+                               (help-fns-function-description-header ',fun)))))
+                  (cond ((string-search "native-compiled" desc) 'native)
+                        ((string-search "byte-compiled" desc) 'byte)
+                        ((string-search "built-in" desc) 'built-in)
+                        (t nil))))))))
+
+  (defmacro expect-native (fun &optional feature)
+    `(progn (expect-help ,fun native ,feature)))
+
+  (defmacro expect-native-if-bound (fun)
+    `(and (boundp ',fun) (expect-help ,fun native)))
+
+  (defmacro expect-builtin (fun &optional feature)
+    `(progn (expect-help ,fun built-in ,feature))))
+
+(expect-native abbrev-mode)
+(expect-native backquote-process)
+(expect-native mode-line-widen)
+(expect-native buffer-menu)
+(expect-native button-mode)
+(expect-native byte-run-strip-symbol-positions)
+(expect-native case-table-get-table)
+(expect-native cconv-convert)
+(expect-native use-default-char-width-table)
+(expect-native cl-generic-p)
+(expect-native cl-struct-define)
+(expect-native-if-bound x-setup-function-keys)
+(expect-native encode-composition-rule)
+(expect-native custom-declare-face)
+(expect-native minibuffer-prompt-properties--setter)
+(expect-native custom-add-choice)
+(expect-native debug-early)
+(expect-native display-table-slot disp-table)
+(expect-native dnd-open-file)
+(expect-native dos-mode25 dos-fns)
+(expect-native find-file-text dos-w32)
+(expect-native-if-bound dynamic-setting-handle-config-changed-event)
+(expect-native easy-menu-item-present-p)
+(expect-native eldoc-mode)
+(expect-native electric-indent-mode)
+(expect-native elisp-mode-syntax-propertize)
+(expect-native getenv)
+(expect-native epa-file-find-file-hook)
+(expect-native face-list)
+(expect-native find-file-noselect)
+(expect-native fill-region)
+(expect-native font-lock-change-mode)
+(expect-native font-lock-add-keywords)
+(expect-native-if-bound fontset-plain-name)
+(expect-native format-read)
+(expect-native frame-edges)
+(expect-native-if-bound fringe-mode)
+(expect-native help-quick)
+(expect-native-if-bound image-type)
+(expect-native indent-region)
+(expect-native indian-compose-regexp)
+(expect-native msdos-setup-keyboard term/internal)
+(expect-native isearch-abort)
+(expect-native iso-transl-set-language)
+(expect-native jit-lock-mode)
+(expect-native jka-compr-build-file-regexp)
+(expect-native keymap-global-set)
+(expect-native forward-sexp)
+(expect-native lisp-string-in-doc-position-p)
+(expect-native ls-lisp-set-options ls-lisp)
+(expect-native macroexp-compiling-p)
+(expect-native map-y-or-n-p)
+(expect-native menu-find-file-existing)
+(expect-native completion-boundaries)
+(expect-native egyptian-shape-grouping)
+(expect-native mouse-double-click-time)
+(expect-native convert-define-charset-argument)
+(expect-native coding-system-change-eol-conversion)
+(expect-native store-substring mule-util)
+(expect-native-if-bound mouse-wheel-change-button)
+(expect-native advice-function-mapc)
+(expect-native comment-string-strip)
+(if (>= emacs-major-version 30)
+    (expect-builtin obarray-make)
+    (expect-native obarray-make))
+(expect-native obarray-map)
+(expect-native oclosure-type)
+(expect-native forward-page)
+(expect-native sentence-end)
+(expect-native show-paren-function)
+(expect-native pgtk-dnd-init-frame pgtk-dnd)
+(expect-native prog-context-menu)
+(expect-native-if-bound regexp-opt)
+(expect-native get-register)
+(expect-native query-replace-descr)
+(expect-native rfn-eshadow-setup-minibuffer)
+(expect-native read-multiple-choice)
+(expect-native-if-bound scroll-bar-scale)
+(expect-native gui-select-text)
+(expect-native seq-first)
+(expect-native hack-read-symbol-shorthands)
+(expect-native next-error-find-buffer)
+(expect-native exit-splash-screen)
+(expect-native buffer-local-boundp)
+(expect-native syntax-propertize-multiline)
+(expect-native tab-bar-mode)
+(expect-native tabulated-list-put-tag)
+(expect-native text-mode)
+(expect-native timer-activate)
+(expect-native tool-bar-mode)
+(expect-native tooltip-mode)
+(expect-native tty-color-desc)
+(expect-native ucs-normalize-hfs-nfd-comp-p ucs-normalize)
+(expect-native uniquify-item-p)
+(expect-native vc-mode)
+(expect-native emacs-version)
+(expect-native define-widget)
+(expect-native window-right)
+(expect-native x-dnd-init-frame x-dnd)
+(expect-native-if-bound x-handle-no-bitmap-icon)
diff --git a/gnu/packages/dictionaries.scm b/gnu/packages/dictionaries.scm
index 06b5c4362c..9f493d91ad 100644
--- a/gnu/packages/dictionaries.scm
+++ b/gnu/packages/dictionaries.scm
@@ -272,12 +272,12 @@ and a Python library.")
                                                 curl "/bin:"
                                                 fribidi "/bin:"
                                                 rlwrap "/bin")))))))
+         (add-after 'unpack 'emacs-make-autoloads
+           (assoc-ref emacs:%standard-phases 'make-autoloads))
          (add-after 'install 'emacs-install
            (assoc-ref emacs:%standard-phases 'install))
-         (add-after 'emacs-install 'emacs-make-autoloads
-           (assoc-ref emacs:%standard-phases 'make-autoloads))
-         (add-after 'emacs-make-autoloads 'emacs-autoloads-compilation
-           (assoc-ref emacs:%standard-phases 'enable-autoloads-compilation)))
+         (add-after 'emacs-install 'emacs-build
+           (assoc-ref emacs:%standard-phases 'build)))
        #:make-flags (list (string-append "PREFIX=" %output)
                           "NETWORK_ACCESS=no test")
        #:imported-modules (,@%gnu-build-system-modules
diff --git a/gnu/packages/emacs-xyz.scm b/gnu/packages/emacs-xyz.scm
index d4819c62ce..ccf7dc6969 100644
--- a/gnu/packages/emacs-xyz.scm
+++ b/gnu/packages/emacs-xyz.scm
@@ -599,8 +599,7 @@ API key.")
                          (search-input-file inputs "bin/guile"))))))
           (add-after 'make-autoloads 'patch-autoloads
             (lambda _
-              (substitute* (string-append (elpa-directory #$output)
-                                          "/geiser-guile-autoloads.el")
+              (substitute* "geiser-guile-autoloads.el"
                 ;; Activating implementations fails when Geiser is not yet
                 ;; loaded, so let's defer that until it is.
                 (("\\(geiser-activate-implementation .*\\)" all)
@@ -669,8 +668,7 @@ using geiser.")
                    (search-input-file inputs "bin/gosh")))))
             (add-after 'make-autoloads 'patch-autoloads
               (lambda _
-                (substitute* (string-append (elpa-directory #$output)
-                                            "/geiser-gauche-autoloads.el")
+                (substitute* "geiser-gauche-autoloads.el"
                   ;; Activating implementations fails when Geiser is not yet
                   ;; loaded, so let's defer that until it is.
                   (("\\(geiser-activate-implementation .*\\)" all)
@@ -715,8 +713,7 @@ a generic Scheme interaction mode for the GNU Emacs editor.")
                          (search-input-file inputs "bin/racket"))))))
           (add-after 'make-autoloads 'patch-autoloads
             (lambda _
-              (substitute* (string-append (elpa-directory #$output)
-                                          "/geiser-racket-autoloads.el")
+              (substitute* "geiser-racket-autoloads.el"
                 ;; Activating implementations fails when Geiser is not yet
                 ;; loaded, so let's defer that until it is.
                 (("\\(geiser-activate-implementation .*\\)" all)
@@ -754,9 +751,7 @@ a generic Scheme interaction mode for the GNU Emacs editor.")
        (modify-phases %standard-phases
          (add-after 'make-autoloads 'patch-autoloads
            (lambda* (#:key outputs #:allow-other-keys)
-             (substitute* (string-append
-                           (elpa-directory (assoc-ref outputs "out"))
-                           "/geiser-chez-autoloads.el")
+             (substitute* "geiser-chez-autoloads.el"
                ;; Activating implementations fails when Geiser is not yet
                ;; loaded, so let's defer that until it is.
                ;; See <https://gitlab.com/emacs-geiser/chez/-/issues/7>.
@@ -1593,13 +1588,11 @@ on stdout instead of using a socket as the Emacsclient does.")
                                            emacs:%default-include)))))
             (add-after 'unpack 'emacs-add-install-to-native-load-path
               (assoc-ref emacs:%standard-phases 'add-install-to-native-load-path))
-            (add-after 'install 'make-autoloads
+            (add-after 'unpack 'make-autoloads
               (assoc-ref emacs:%standard-phases 'make-autoloads))
-            (add-after 'make-autoloads 'enable-autoloads-compilation
-              (assoc-ref emacs:%standard-phases 'enable-autoloads-compilation))
-            (add-after 'enable-autoloads-compilation 'patch-el-files
+            (add-after 'unpack 'patch-el-files
               (assoc-ref emacs:%standard-phases 'patch-el-files))
-            (add-after 'patch-el-files 'emacs-build
+            (add-after 'install 'emacs-build
               (assoc-ref emacs:%standard-phases 'build))
             (add-after 'emacs-build 'validate-compiled-autoloads
               (assoc-ref emacs:%standard-phases 'validate-compiled-autoloads)))))
@@ -1678,7 +1671,11 @@ libgit2 bindings for Emacs, intended to boost the performance of Magit.")
             (replace 'install
               (lambda args
                 (with-directory-excursion "lisp"
-                  (apply (assoc-ref %standard-phases 'install) args)))))))
+                  (apply (assoc-ref %standard-phases 'install) args))))
+            (replace 'build
+              (lambda args
+                (with-directory-excursion "lisp"
+                  (apply (assoc-ref %standard-phases 'build) args)))))))
       (native-inputs
        (list texinfo))
       (inputs
@@ -3933,6 +3930,8 @@ defined in RFC 2425 and RFC 2426 to/from The Insidious Big Brother Database
               (emacs-substitute-sexps "eweouz.el"
                 ("eweouz-helper-dirs"
                  `(list ,(string-append #$output "/libexec/eweouz"))))))
+          (add-after 'enter-lisp-dir 'emacs-make-autoloads
+            (assoc-ref emacs:%standard-phases 'make-autoloads))
           (add-after 'emacs-patch-variables 'emacs-expand-load-path
             (assoc-ref emacs:%standard-phases 'expand-load-path))
           (add-after 'emacs-expand-load-path 'emacs-add-install-to-native-load-path
@@ -3940,9 +3939,7 @@ defined in RFC 2425 and RFC 2426 to/from The Insidious Big Brother Database
           (add-after 'emacs-add-install-to-native-load-path 'emacs-install
             (assoc-ref emacs:%standard-phases 'install))
           (add-after 'emacs-install 'emacs-build
-            (assoc-ref emacs:%standard-phases 'build))
-          (add-after 'emacs-install 'emacs-make-autoloads
-            (assoc-ref emacs:%standard-phases 'make-autoloads)))))
+            (assoc-ref emacs:%standard-phases 'build)))))
     (native-inputs
      (list autoconf
            automake
@@ -5611,6 +5608,8 @@ during idle time, while Emacs is doing nothing else.")
              ;; upgrading" that pdf-tools tries to perform.
              (emacs-substitute-variables "pdf-tools.el"
                ("pdf-tools-handle-upgrades" '()))))
+         (add-after 'enter-lisp-dir 'emacs-make-autoloads
+           (assoc-ref emacs:%standard-phases 'make-autoloads))
          (add-after 'emacs-patch-variables 'emacs-expand-load-path
            (assoc-ref emacs:%standard-phases 'expand-load-path))
          (add-after 'emacs-expand-load-path 'emacs-add-install-to-native-load-path
@@ -5618,9 +5617,7 @@ during idle time, while Emacs is doing nothing else.")
          (add-after 'emacs-add-install-to-native-load-path 'emacs-install
            (assoc-ref emacs:%standard-phases 'install))
          (add-after 'emacs-install 'emacs-build
-           (assoc-ref emacs:%standard-phases 'build))
-         (add-after 'emacs-install 'emacs-make-autoloads
-           (assoc-ref emacs:%standard-phases 'make-autoloads)))))
+           (assoc-ref emacs:%standard-phases 'build)))))
     (native-inputs
      (list autoconf automake emacs-minimal pkg-config))
     (inputs
@@ -16912,7 +16909,7 @@ passive voice.")
 (define-public emacs-org
   (package
     (name "emacs-org")
-    (version "9.6.21")
+    (version "9.6.24")
     (source
      (origin
        (method git-fetch)
@@ -16921,7 +16918,7 @@ passive voice.")
              (commit (string-append "release_" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1hf76wa7qvp9lvkr3rgzk7q3slq7mf17w6w6axaj6cn73ryn2ldw"))))
+        (base32 "1ry7zqv25zbh2lvmirm8vyxc55zggf7s7508nkf4yfs4yayr7rnw"))))
     (build-system emacs-build-system)
     (arguments
      (list
@@ -16963,6 +16960,10 @@ passive voice.")
               (substitute* "testing/lisp/test-org.el"
                 (("test-org/org-(encode-time|time-string-to-time) .*" all)
                  (string-append all "  (skip-unless nil)\n")))))
+          (replace 'build
+            (lambda args
+              (with-directory-excursion "lisp"
+                (apply (assoc-ref %standard-phases 'build) args))))
           (replace 'install
             (lambda _
               (let ((elpa (elpa-directory #$output))
diff --git a/gnu/packages/emacs.scm b/gnu/packages/emacs.scm
index 26bbbc6c9f..40a44f6e0c 100644
--- a/gnu/packages/emacs.scm
+++ b/gnu/packages/emacs.scm
@@ -100,17 +100,19 @@
 (define-public emacs-minimal
   (package
     (name "emacs-minimal")
-    (version "29.1")
+    (version "29.3")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://gnu/emacs/emacs-"
                                   version ".tar.xz"))
               (sha256
                (base32
-                "009f7q08vg919b90k2jrsznq73s3n224avz80dd2y7i3rjjq3y6j"))
-              (patches (search-patches "emacs-exec-path.patch"
+                "1822swrk4ifmkd4h9l0h37zifcpa1w3sy3vsgyffsrp6mk9hak63"))
+              (patches (search-patches "emacs-disable-jit-compilation.patch"
+                                       "emacs-exec-path.patch"
                                        "emacs-fix-scheme-indent-function.patch"
                                        "emacs-native-comp-driver-options.patch"
+                                       "emacs-native-comp-fix-filenames.patch"
                                        "emacs-pgtk-super-key-fix.patch"))
               (modules '((guix build utils)))
               (snippet
@@ -376,7 +378,21 @@ editor (console only)")
                     (string-append
                      "-B" #$(this-package-input "libgccjit") "/lib/")
                     (string-append
-                     "-B" #$(this-package-input "libgccjit") "/lib/gcc/"))))))))))
+                     "-B" #$(this-package-input "libgccjit") "/lib/gcc/"))))))
+            (add-after 'build 'build-trampolines
+              (lambda* (#:key make-flags #:allow-other-keys)
+                (apply invoke "make" "trampolines" make-flags)))
+            (add-after 'validate-runpath 'validate-comp-integrity
+              (lambda* (#:key outputs #:allow-other-keys)
+                (if #$(%current-target-system)
+                    (display "Cannot validate native-comp on cross builds.\n")
+                    (invoke
+                     (string-append (assoc-ref outputs "out") "/bin/emacs")
+                     "--batch"
+                     "--load"
+                     #$(local-file
+                        (search-auxiliary-file "emacs/comp-integrity.el"))
+                     "-f" "ert-run-tests-batch-and-exit"))))))))
     (inputs
      (modify-inputs (package-inputs emacs-minimal)
        (prepend gnutls
@@ -533,8 +549,8 @@ editor (with wide ints)" )
         #~(cons "--with-wide-int" #$flags))))))
 
 (define-public emacs-next-minimal
-  (let ((commit "9d27b95b263473fb41a30e3f6ea5607c99e93a61")
-        (revision "1"))
+  (let ((commit "170c6557922dad7e6e9bc0d6dadf6c080108fd42")
+        (revision "2"))
    (package
     (inherit emacs-minimal)
     (name "emacs-next-minimal")
@@ -547,7 +563,7 @@ editor (with wide ints)" )
              (commit commit)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "00mwpq1msr3jij281w5piqmbwq968xr8dn9hqbf4r947ck754kn9"))
+        (base32 "04carva3b6h9fnlzazrsxsj41hcnjc26kxjij07l159azi40l6sk"))
        (patches
         (search-patches "emacs-next-exec-path.patch"
                         "emacs-fix-scheme-indent-function.patch"
diff --git a/gnu/packages/guile-xyz.scm b/gnu/packages/guile-xyz.scm
index f35e646f61..08fd3f1085 100644
--- a/gnu/packages/guile-xyz.scm
+++ b/gnu/packages/guile-xyz.scm
@@ -2311,12 +2311,12 @@ user which package sets would they like to install from it.")
                              (invoke "guild" "compile" "-L" module-dir
                                      file "-o" go)))
                          (find-files module-dir "\\.scm$")))))
+         (add-after 'unpack 'make-autoloads
+           (assoc-ref emacs:%standard-phases 'make-autoloads))
          (add-after 'install 'install-emacs-files
            (assoc-ref emacs:%standard-phases 'install))
          (add-after 'install-emacs-files 'compile-emacs-files
-           (assoc-ref emacs:%standard-phases 'build))
-         (add-after 'compile-emacs-files 'make-autoloads
-           (assoc-ref emacs:%standard-phases 'make-autoloads)))))
+           (assoc-ref emacs:%standard-phases 'build)))))
     (home-page "https://www.draketo.de/english/wisp")
     (inputs
      (list guile-3.0))
diff --git a/gnu/packages/language.scm b/gnu/packages/language.scm
index db78425ec9..0b562bcde9 100644
--- a/gnu/packages/language.scm
+++ b/gnu/packages/language.scm
@@ -1003,15 +1003,15 @@ and manipulation.")
                                                 "convert2skk/skk2list")
                                           (find-files "filters" "\\.rb$"))))))
                   ;; Install and make autoloads for skk-xml.el.
+                  (add-after 'unpack 'make-autoloads
+                    (assoc-ref emacs:%standard-phases
+                               'make-autoloads))
                   (add-after 'install 'install-emacs-files
                     (assoc-ref emacs:%standard-phases
                                'install))
                   (add-after 'install-emacs-files 'compile-emacs-files
                     (assoc-ref emacs:%standard-phases
                                'build))
-                  (add-after 'compile-emacs-files 'make-autoloads
-                    (assoc-ref emacs:%standard-phases
-                               'make-autoloads))
                   (add-after 'install 'install-docs
                     (lambda* (#:key outputs #:allow-other-keys)
                       (let ((doc (string-append (assoc-ref outputs "out")
diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm
index 12a780ca99..f3a0e764bf 100644
--- a/gnu/packages/mail.scm
+++ b/gnu/packages/mail.scm
@@ -1170,17 +1170,17 @@ repository and Maildir/IMAP as LOCAL repository.")
            "0xazygwdc328m5l31rxjazq9giv2xrygp2p2q455lf3jhdxwq1km"))))
       (build-system gnu-build-system)
       (arguments
-       (let ((elisp-dir #~(string-append #$output "/share/emacs/site-lisp"))
-             (icon-dir  #~(string-append #$output "/share/mew")))
+       (let ((icon-dir  #~(string-append #$output "/share/mew")))
          (list
           #:modules '((guix build gnu-build-system)
                       (guix build utils)
+                      ((guix build emacs-build-system) #:prefix emacs:)
                       (guix build emacs-utils))
-          #:imported-modules `(,@%gnu-build-system-modules
-                               (guix build emacs-utils))
+          #:imported-modules %emacs-build-system-modules
           #:tests? #f
           #:configure-flags
-          #~(list (string-append "--with-elispdir=" #$elisp-dir)
+          #~(list (string-append "--with-elispdir="
+                                 (emacs:elpa-directory #$output))
                   (string-append "--with-etcdir=" #$icon-dir))
           #:phases
           #~(modify-phases %standard-phases
@@ -1191,9 +1191,15 @@ repository and Maildir/IMAP as LOCAL repository.")
                      `(progn
                        (add-to-list 'image-load-path 'mew-icon-directory)
                        ,#$icon-dir)))))
-              (add-after 'install 'generate-autoloads
+              (add-after 'unpack 'generate-autoloads
                 (lambda _
-                  (emacs-generate-autoloads "mew" #$elisp-dir)))))))
+                  (emacs-generate-autoloads "mew" "elisp")
+                  (substitute* "elisp/mew-autoloads.el"
+                    ((";; no-byte-compile.*") ""))
+                  ;; Add generated autoloads to Makefile, so they get compiled
+                  (substitute* "elisp/Makefile"
+                    (("OBJS =") "OBJS = mew-autoloads.elc")
+                    (("SRCS =") "SRCS = mew-autoloads.el"))))))))
       (native-inputs
        (list emacs))
       (propagated-inputs
@@ -4783,14 +4789,12 @@ ex-like commands on it.")
                (for-each (lambda (file)
                            (install-file file (string-append out "/bin")))
                          (list "mailfilter.crm" "mailreaver.crm" "mailtrainer.crm")))))
-         (add-after 'install 'install-emacs-mode
-           (assoc-ref emacs:%standard-phases 'install))
          ;; Run phases from the emacs build system.
-         (add-after 'install-emacs-mode 'make-autoloads
+         (add-after 'unpack 'make-autoloads
            (assoc-ref emacs:%standard-phases 'make-autoloads))
-         (add-after 'make-autoloads 'enable-autoloads-compilation
-           (assoc-ref emacs:%standard-phases 'enable-autoloads-compilation))
-         (add-after 'enable-autoloads-compilation 'emacs-build
+         (add-after 'install 'install-emacs-mode
+           (assoc-ref emacs:%standard-phases 'install))
+         (add-after 'install-emacs-mode 'emacs-build
            (assoc-ref emacs:%standard-phases 'build))
          (add-after 'emacs-build 'validate-compiled-autoloads
            (assoc-ref emacs:%standard-phases 'validate-compiled-autoloads)))))
diff --git a/gnu/packages/patches/emacs-disable-jit-compilation.patch b/gnu/packages/patches/emacs-disable-jit-compilation.patch
new file mode 100644
index 0000000000..8b1ac5a9df
--- /dev/null
+++ b/gnu/packages/patches/emacs-disable-jit-compilation.patch
@@ -0,0 +1,19 @@
+Index: emacs-29.2/src/comp.c
+===================================================================
+--- emacs-29.2.orig/src/comp.c
++++ emacs-29.2/src/comp.c
+@@ -5648,8 +5648,12 @@ For internal use. */);
+     doc: /* If non-nil, compile loaded .elc files asynchronously.
+ 
+ After compilation, each function definition is updated to use the
+-natively-compiled one.  */);
+-  native_comp_jit_compilation = true;
++natively-compiled one.  This variable is enabled by default upstream,
++but disabled in Guix to better make use of precompiled packages.
++Notably, Guix removes the hashes that prevent inadvertent shadowing
++frm the file names of compiled libraries in order to facilitate grafts.
++Enable at your own risk!  */);
++  native_comp_jit_compilation = false;
+ 
+   DEFSYM (Qnative_comp_speed, "native-comp-speed");
+   DEFSYM (Qnative_comp_debug, "native-comp-debug");
diff --git a/gnu/packages/patches/emacs-native-comp-fix-filenames.patch b/gnu/packages/patches/emacs-native-comp-fix-filenames.patch
new file mode 100644
index 0000000000..169323f290
--- /dev/null
+++ b/gnu/packages/patches/emacs-native-comp-fix-filenames.patch
@@ -0,0 +1,338 @@
+Upstream hashes both the absolute file name and the content of a file
+to derive the name for the natively compiled files.  This breaks the
+staged install used in guix, as any $GUIX_PROFILE is distinct from
+the build directory.  It also breaks grafts, as hardcoded store file
+names get rewritten; thus changing the file hash.
+
+In addition, this patch changes how native-comp-eln-load-path is
+constructed.  Upstream, an entry of the directory “../lisp” is added
+supposedly for bootstrap only, but this directory appears to find its
+way into the actual variable despite attempts to remove it by calling
+‘startup--update-eln-cache’.
+The user-visible procedure ‘startup-redirect-eln-cache’ is kept, as
+packages may require it, but only pushes the new value now.
+
+Index: emacs-29.2/src/comp.c
+===================================================================
+--- emacs-29.2.orig/src/comp.c
++++ emacs-29.2/src/comp.c
+@@ -4396,26 +4396,17 @@ DEFUN ("comp-el-to-eln-rel-filename", Fc
+        Scomp_el_to_eln_rel_filename, 1, 1, 0,
+        doc: /* Return the relative name of the .eln file for FILENAME.
+ FILENAME must exist, and if it's a symlink, the target must exist.
+-If FILENAME is compressed, it must have the \".gz\" extension,
+-and Emacs must have been compiled with zlib; the file will be
+-uncompressed on the fly to hash its contents.
+-Value includes the original base name, followed by 2 hash values,
+-one for the file name and another for its contents, followed by .eln.  */)
++FILENAME is resolved relative to `load-path' and only the suffix of
++the first matching path is kept.  If FILENAME is not found to be relative
++to any directory `load-path', it is used as-is to construct the return
++value.  */)
+   (Lisp_Object filename)
+ {
+   CHECK_STRING (filename);
+ 
+-  /* Resolve possible symlinks in FILENAME, so that path_hash below
+-     always compares equal. (Bug#44701).  */
+-  filename = Fexpand_file_name (filename, Qnil);
+-  char *file_normalized = realpath (SSDATA (ENCODE_FILE (filename)), NULL);
+-  if (file_normalized)
+-    {
+-      filename = DECODE_FILE (make_unibyte_string (file_normalized,
+-						   strlen (file_normalized)));
+-      xfree (file_normalized);
+-    }
++  Lisp_Object rel_name = filename;
+ 
++  filename = Fexpand_file_name (filename, Qnil);
+   if (NILP (Ffile_exists_p (filename)))
+     xsignal1 (Qfile_missing, filename);
+ 
+@@ -4423,64 +4414,55 @@ one for the file name and another for it
+   filename = Fw32_long_file_name (filename);
+ #endif
+ 
+-  Lisp_Object content_hash = comp_hash_source_file (filename);
+-
+-  if (suffix_p (filename, ".gz"))
+-    filename = Fsubstring (filename, Qnil, make_fixnum (-3));
+-
+-  /* We create eln filenames with an hash in order to look-up these
+-     starting from the source filename, IOW have a relation
+-
+-     /absolute/path/filename.el + content ->
+-     eln-cache/filename-path_hash-content_hash.eln.
+-
+-     'dlopen' can return the same handle if two shared with the same
+-     filename are loaded in two different times (even if the first was
+-     deleted!).  To prevent this scenario the source file content is
+-     included in the hashing algorithm.
+-
+-     As at any point in time no more then one file can exist with the
+-     same filename, should be possible to clean up all
+-     filename-path_hash-* except the most recent one (or the new one
+-     being recompiled).
+-
+-     As installing .eln files compiled during the build changes their
+-     absolute path we need an hashing mechanism that is not sensitive
+-     to that.  For this we replace if match PATH_DUMPLOADSEARCH or
+-     *PATH_REL_LOADSEARCH with '//' before computing the hash.  */
+-
+-  if (NILP (loadsearch_re_list))
+-    {
+-      Lisp_Object sys_re =
+-	concat2 (build_string ("\\`[[:ascii:]]+"),
+-		 Fregexp_quote (build_string ("/" PATH_REL_LOADSEARCH "/")));
+-      Lisp_Object dump_load_search =
+-	Fexpand_file_name (build_string (PATH_DUMPLOADSEARCH "/"), Qnil);
+-#ifdef WINDOWSNT
+-      dump_load_search = Fw32_long_file_name (dump_load_search);
+-#endif
+-      loadsearch_re_list = list2 (sys_re, Fregexp_quote (dump_load_search));
+-    }
++  Lisp_Object tail = Vload_path;
++  Lisp_Object name_len = Flength (filename);
+ 
+-  Lisp_Object lds_re_tail = loadsearch_re_list;
+-  FOR_EACH_TAIL (lds_re_tail)
++  FOR_EACH_TAIL_SAFE (tail)
+     {
+-      Lisp_Object match_idx =
+-	Fstring_match (XCAR (lds_re_tail), filename, Qnil, Qnil);
+-      if (BASE_EQ (match_idx, make_fixnum (0)))
++      Lisp_Object directory = Ffile_name_as_directory (XCAR (tail));
++      Lisp_Object len = Flength (directory);
++      if (XFIXNUM (name_len) < XFIXNUM (len))
++	continue;
++      else if (EQ (Qt, Fcompare_strings (filename, make_fixnum (0), len,
++					 directory, make_fixnum (0), len,
++					 Qnil)))
+ 	{
+-	  filename =
+-	    Freplace_match (build_string ("//"), Qt, Qt, filename, Qnil);
++	  filename = Fsubstring (filename, len, Qnil);
+ 	  break;
+ 	}
+     }
+-  Lisp_Object separator = build_string ("-");
+-  Lisp_Object path_hash = comp_hash_string (filename);
+-  filename = concat2 (Ffile_name_nondirectory (Fsubstring (filename, Qnil,
+-							   make_fixnum (-3))),
+-		      separator);
+-  Lisp_Object hash = concat3 (path_hash, separator, content_hash);
+-  return concat3 (filename, hash, build_string (NATIVE_ELISP_SUFFIX));
++
++  if (file_name_absolute_p (filename)) /* no match in load-path */
++    filename = rel_name;
++
++  Lisp_Object bogus_dirs =
++    Fgetenv_internal (build_string ("NATIVE_COMP_BOGUS_DIRS"), Qnil);
++
++  if (!NILP (bogus_dirs))
++  {
++    tail = CALL2I (split-string, bogus_dirs, build_string (":"));
++
++    FOR_EACH_TAIL_SAFE (tail)
++      {
++	Lisp_Object directory = Ffile_name_as_directory (XCAR (tail));
++	Lisp_Object len = Flength (directory);
++	if (XFIXNUM (name_len) < XFIXNUM (len))
++	  continue;
++	else if (EQ (Qt, Fcompare_strings (filename, make_fixnum (0), len,
++					   directory, make_fixnum (0), len,
++					   Qnil)))
++	  {
++	    filename = Fsubstring (filename, len, Qnil);
++	    break;
++	  }
++      }
++  }
++
++  if (suffix_p (filename, ".gz"))
++    filename = Fsubstring (filename, Qnil, make_fixnum (-3));
++
++  return concat2(Fsubstring (filename, Qnil, make_fixnum (-3)),
++		 build_string (NATIVE_ELISP_SUFFIX));
+ }
+ 
+ DEFUN ("comp-el-to-eln-filename", Fcomp_el_to_eln_filename,
+@@ -4494,13 +4476,7 @@ If BASE-DIR is non-nil, use it as the di
+ non-absolute BASE-DIR is interpreted as relative to `invocation-directory'.
+ If BASE-DIR is omitted or nil, look for the first writable directory
+ in `native-comp-eln-load-path', and use as BASE-DIR its subdirectory
+-whose name is given by `comp-native-version-dir'.
+-If FILENAME specifies a preloaded file, the directory for the .eln
+-file is the \"preloaded/\" subdirectory of the directory determined
+-as described above.  FILENAME is considered to be a preloaded file if
+-the value of `comp-file-preloaded-p' is non-nil, or if FILENAME
+-appears in the value of the environment variable LISP_PRELOADED;
+-the latter is supposed to be used by the Emacs build procedure.  */)
++whose name is given by `comp-native-version-dir'. */)
+   (Lisp_Object filename, Lisp_Object base_dir)
+ {
+   Lisp_Object source_filename = filename;
+@@ -4548,10 +4524,11 @@ the latter is supposed to be used by the
+   Lisp_Object lisp_preloaded =
+     Fgetenv_internal (build_string ("LISP_PRELOADED"), Qnil);
+   base_dir = Fexpand_file_name (Vcomp_native_version_dir, base_dir);
++  bool preloaded = comp_file_preloaded_p;
+   if (comp_file_preloaded_p
+       || (!NILP (lisp_preloaded)
+-	  && !NILP (Fmember (CALL1I (file-name-base, source_filename),
+-			     Fmapcar (intern_c_string ("file-name-base"),
++	  && !NILP (Fmember (CALL1I (file-name-sans-extension, source_filename),
++			     Fmapcar (intern_c_string ("file-name-sans-extension"),
+ 				      CALL1I (split-string, lisp_preloaded))))))
+     base_dir = Fexpand_file_name (build_string ("preloaded"), base_dir);
+ 
+@@ -5863,10 +5840,7 @@ The last directory of this list is assum
+ the system *.eln files, which are the files produced when building
+ Emacs.  */);
+ 
+-  /* Temporary value in use for bootstrap.  We can't do better as
+-     `invocation-directory' is still unset, will be fixed up during
+-     dump reload.  */
+-  Vnative_comp_eln_load_path = Fcons (build_string ("../native-lisp/"), Qnil);
++  Vnative_comp_eln_load_path = Qnil;
+ 
+   DEFVAR_LISP ("native-comp-enable-subr-trampolines",
+ 	       Vnative_comp_enable_subr_trampolines,
+Index: emacs-29.2/lisp/startup.el
+===================================================================
+--- emacs-29.2.orig/lisp/startup.el
++++ emacs-29.2/lisp/startup.el
+@@ -545,9 +545,6 @@ DIRS are relative."
+ (defvar native-comp-jit-compilation)
+ (defvar native-comp-enable-subr-trampolines)
+ 
+-(defvar startup--original-eln-load-path nil
+-  "Original value of `native-comp-eln-load-path'.")
+-
+ (defun startup-redirect-eln-cache (cache-directory)
+   "Redirect the user's eln-cache directory to CACHE-DIRECTORY.
+ CACHE-DIRECTORY must be a single directory, a string.
+@@ -558,22 +555,10 @@ to `user-emacs-directory'.
+ For best results, call this function in your early-init file,
+ so that the rest of initialization and package loading uses
+ the updated value."
+-  ;; Remove the original eln-cache.
+-  (setq native-comp-eln-load-path (cdr native-comp-eln-load-path))
+-  ;; Add the new eln-cache.
+   (push (expand-file-name (file-name-as-directory cache-directory)
+                           user-emacs-directory)
+         native-comp-eln-load-path))
+ 
+-(defun startup--update-eln-cache ()
+-  "Update the user eln-cache directory due to user customizations."
+-  ;; Don't override user customizations!
+-  (when (equal native-comp-eln-load-path
+-               startup--original-eln-load-path)
+-    (startup-redirect-eln-cache "eln-cache")
+-    (setq startup--original-eln-load-path
+-          (copy-sequence native-comp-eln-load-path))))
+-
+ (defun normal-top-level ()
+   "Emacs calls this function when it first starts up.
+ It sets `command-line-processed', processes the command-line,
+@@ -1362,12 +1347,6 @@ please check its value")
+       startup-init-directory)))
+   (setq early-init-file user-init-file)
+ 
+-  ;; Amend `native-comp-eln-load-path', since the early-init file may
+-  ;; have altered `user-emacs-directory' and/or changed the eln-cache
+-  ;; directory.
+-  (when (featurep 'native-compile)
+-    (startup--update-eln-cache))
+-
+   ;; If any package directory exists, initialize the package system.
+   (and user-init-file
+        package-enable-at-startup
+@@ -1502,12 +1481,6 @@ please check its value")
+         startup-init-directory))
+      t)
+ 
+-    ;; Amend `native-comp-eln-load-path' again, since the early-init
+-    ;; file may have altered `user-emacs-directory' and/or changed the
+-    ;; eln-cache directory.
+-    (when (featurep 'native-compile)
+-      (startup--update-eln-cache))
+-
+     (when (and deactivate-mark transient-mark-mode)
+       (with-current-buffer (window-buffer)
+         (deactivate-mark)))
+Index: emacs-29.2/lisp/loadup.el
+===================================================================
+--- emacs-29.2.orig/lisp/loadup.el
++++ emacs-29.2/lisp/loadup.el
+@@ -53,6 +53,14 @@
+ (setq redisplay--inhibit-bidi t)
+ 
+ (message "Dump mode: %s" dump-mode)
++;; Compensate for native-comp-eln-load-path being empty by Guix' default.
++(and (featurep 'native-compile)
++     dump-mode
++     (setq
++      native-comp-eln-load-path
++      (cons (expand-file-name "../native-lisp" invocation-directory)
++            native-comp-eln-load-path)
++      comp-file-preloaded-p t))
+ 
+ ;; Add subdirectories to the load-path for files that might get
+ ;; autoloaded when bootstrapping or running Emacs normally.
+@@ -494,22 +502,20 @@ lost after dumping")))
+             (concat eln-dest-dir "native-lisp/" comp-native-version-dir "/"))
+       (maphash (lambda (_ cu)
+                  (let* ((file (native-comp-unit-file cu))
+-                        (preloaded (equal (substring (file-name-directory file)
+-                                                     -10 -1)
+-                                          "preloaded"))
+-                        (eln-dest-dir-eff (if preloaded
+-                                              (expand-file-name "preloaded"
+-                                                                eln-dest-dir)
+-                                            eln-dest-dir)))
++                        (native-lisp-needle
++                         (regexp-quote (concat "native-lisp/"
++                                               comp-native-version-dir "/"))))
+                    (native-comp-unit-set-file
+                     cu
+ 	            (cons
+                      ;; Relative filename from the installed binary.
+-                     (file-relative-name (expand-file-name
+-                                          (file-name-nondirectory
+-                                           file)
+-                                          eln-dest-dir-eff)
+-                                         bin-dest-dir)
++                     (file-relative-name
++                      (expand-file-name
++                       (save-match-data
++                         (string-match native-lisp-needle file)
++                         (substring file (match-end 0)))
++                       eln-dest-dir)
++                      bin-dest-dir)
+                      ;; Relative filename from the built uninstalled binary.
+                      (file-relative-name file invocation-directory)))))
+ 	       comp-loaded-comp-units-h)))
+@@ -557,7 +563,9 @@ lost after dumping")))
+                  (equal dump-mode "pdump"))
+         ;; Don't enable this before bootstrap is completed, as the
+         ;; compiler infrastructure may not be usable yet.
+-        (setq native-comp-enable-subr-trampolines t))
++        (setq native-comp-enable-subr-trampolines t
++              ;; We loaded everything we could.
++              comp-file-preloaded-p nil))
+       (message "Dumping under the name %s" output)
+       (condition-case ()
+           (delete-file output)
+Index: emacs-29.2/src/Makefile.in
+===================================================================
+--- emacs-29.2.orig/src/Makefile.in
++++ emacs-29.2/src/Makefile.in
+@@ -553,6 +553,7 @@ shortlisp := $(filter-out ${shortlisp_fi
+ ## We don't really need to sort, but may as well use it to remove duplicates.
+ shortlisp := loaddefs.el loadup.el $(sort ${shortlisp})
+ export LISP_PRELOADED = ${shortlisp}
++export NATIVE_COMP_BOGUS_DIRS =
+ lisp = $(addprefix ${lispsource}/,${shortlisp})
+ 
+ ## Construct full set of libraries to be linked.
diff --git a/gnu/packages/xorg.scm b/gnu/packages/xorg.scm
index ddbbdb74ba..e51b30dcc0 100644
--- a/gnu/packages/xorg.scm
+++ b/gnu/packages/xorg.scm
@@ -6316,7 +6316,6 @@ X11 servers, Windows, or macOS.")
                            (guix build emacs-utils))
        #:configure-flags
        (list "--with-anthy-utf8"
-             (string-append "--with-lispdir=" %output "/share/emacs")
              ;; Set proper runpath
              (string-append "LDFLAGS=-Wl,-rpath=" %output "/lib")
              "CFLAGS=-O2 -g -fcommon")
@@ -6330,21 +6329,11 @@ X11 servers, Windows, or macOS.")
                  ("uim-el-agent" (string-append out "/bin/uim-el-agent"))
                  ("uim-el-helper-agent" (string-append out "/bin/uim-el-helper-agent"))))
              #t))
-         ;; Fix installation path by renaming share/emacs/uim-el to
-         ;; share/emacs/site-lisp
-         (add-after 'install 'fix-install-path
-           (lambda* (#:key outputs #:allow-other-keys)
-             (let ((share-emacs (string-append (assoc-ref outputs "out")
-                                               "/share/emacs")))
-               (rename-file (string-append share-emacs "/uim-el")
-                            (string-append share-emacs "/site-lisp")))
-             #t))
-         ;; Generate emacs autoloads for uim.el
          (add-after 'fix-install-path 'make-autoloads
            (lambda* (#:key outputs #:allow-other-keys)
              (emacs-generate-autoloads
               ,name (string-append (assoc-ref outputs "out")
-                                   "/share/emacs/site-lisp"))
+                                   "/share/emacs/site-lisp/uim-el"))
              #t)))))
     (home-page "https://github.com/uim/uim")
     (synopsis "Multilingual input method framework")
diff --git a/guix/build/emacs-build-system.scm b/guix/build/emacs-build-system.scm
index 3808b60445..aa083c6409 100644
--- a/guix/build/emacs-build-system.scm
+++ b/guix/build/emacs-build-system.scm
@@ -132,29 +132,25 @@ environment variable\n" source-directory))
     (parameterize ((%emacs emacs))
       (emacs-compile-directory (elpa-directory out)))))
 
-(define* (patch-el-files #:key outputs #:allow-other-keys)
-  "Substitute the absolute \"/bin/\" directory with the right location in the
-store in '.el' files."
-
-  (let* ((out (assoc-ref outputs "out"))
-         (elpa-name-ver (store-directory->elpa-name-version out))
-         (el-dir (string-append out %install-dir "/" elpa-name-ver))
-         (el-files (find-files (getcwd) "\\.el$")))
-    (define (substitute-program-names)
-      (substitute* el-files
-        (("\"/bin/([^.]\\S*)\"" _ cmd-name)
-         (let ((cmd (which cmd-name)))
-           (unless cmd
-             (error "patch-el-files: unable to locate " cmd-name))
-           (string-append "\"" cmd "\"")))))
-
-    (with-directory-excursion el-dir
-      ;; Some old '.el' files (e.g., tex-buf.el in AUCTeX) are still
-      ;; ISO-8859-1-encoded.
-      (unless (false-if-exception (substitute-program-names))
-        (with-fluids ((%default-port-encoding "ISO-8859-1"))
-          (substitute-program-names))))
-    #t))
+(define* (patch-el-files #:key inputs outputs #:allow-other-keys)
+  "Substitute the absolute \"/bin/\" and \"/sbin\" directories with the right
+locations in the store in '.el' files."
+
+  (define substitute-program-names
+    (let ((el-files (find-files (getcwd) "\\.el$")))
+      (lambda ()
+        (substitute* el-files
+          (("\"/(s?bin/[^.]\\S*)\"" _ cmd)
+           (let ((cmd (search-input-file inputs cmd)))
+             (unless cmd
+               (error "patch-el-files: unable to locate " (basename cmd)))
+             (string-append "\"" cmd "\"")))))))
+
+  (unless (false-if-exception (substitute-program-names))
+    ;; Some old '.el' files (e.g., tex-buf.el in AUCTeX) are still
+    ;; ISO-8859-1-encoded.
+    (with-fluids ((%default-port-encoding "ISO-8859-1"))
+      (substitute-program-names))))
 
 (define (find-root-library-file name)
   (let loop ((parts (string-split
@@ -224,10 +220,8 @@ store in '.el' files."
       (emacs-batch-edit-file (string-append name ".el")
         %write-pkg-file-form)))
 
-  (let* ((out (assoc-ref outputs "out"))
-         (elpa-name-ver (store-directory->elpa-name-version out)))
-    (with-directory-excursion (elpa-directory out)
-      (and=> (find-root-library-file elpa-name-ver) write-pkg-file))))
+  (let ((name (store-directory->elpa-name-version (assoc-ref outputs "out"))))
+    (and=> (find-root-library-file name) write-pkg-file)))
 
 (define* (check #:key tests? (test-command '("make" "check"))
                 (parallel-tests? #t) #:allow-other-keys)
@@ -306,24 +300,15 @@ parallel. PARALLEL-TESTS? is ignored when using a non-make TEST-COMMAND."
                   info-files)))
     #t))
 
-(define* (make-autoloads #:key outputs inputs #:allow-other-keys)
+(define* (make-autoloads #:key outputs #:allow-other-keys)
   "Generate the autoloads file."
-  (let* ((emacs (search-input-file inputs "/bin/emacs"))
-         (out (assoc-ref outputs "out"))
-         (elpa-name-ver (store-directory->elpa-name-version out))
-         (elpa-name (package-name->name+version elpa-name-ver))
-         (el-dir (elpa-directory out)))
-    (parameterize ((%emacs emacs))
-      (emacs-generate-autoloads elpa-name el-dir))))
-
-(define* (enable-autoloads-compilation #:key outputs #:allow-other-keys)
-  "Remove the NO-BYTE-COMPILATION local variable embedded in the generated
-autoload files."
-  (let* ((out (assoc-ref outputs "out"))
-         (autoloads (find-files out "-autoloads.el$")))
-    (substitute* autoloads
-      ((";; no-byte-compile.*") ""))
-    #t))
+  (emacs-generate-autoloads
+   (package-name->name+version (store-directory->elpa-name-version
+                                (assoc-ref outputs "out")))
+   (getcwd))
+  ;; Ensure that autoloads can be byte-compiled.
+  (substitute* (find-files "." "-autoloads\\.el$")
+    ((";; no-byte-compile.*") "")))
 
 (define* (validate-compiled-autoloads #:key outputs #:allow-other-keys)
   "Verify whether the byte compiled autoloads load fine."
@@ -358,7 +343,11 @@ for libraries following the ELPA convention."
 (define %standard-phases
   (modify-phases gnu:%standard-phases
     (replace 'unpack unpack)
+    (add-after 'unpack 'ensure-package-description
+      ensure-package-description)
     (add-after 'unpack 'expand-load-path expand-load-path)
+    (add-after 'unpack 'patch-el-files patch-el-files)
+    (add-after 'expand-load-path 'make-autoloads make-autoloads)
     (add-after 'expand-load-path 'add-install-to-native-load-path
       add-install-to-native-load-path)
     (delete 'bootstrap)
@@ -366,14 +355,8 @@ for libraries following the ELPA convention."
     (delete 'build)
     (replace 'check check)
     (replace 'install install)
-    (add-after 'install 'make-autoloads make-autoloads)
-    (add-after 'make-autoloads 'enable-autoloads-compilation
-      enable-autoloads-compilation)
-    (add-after 'enable-autoloads-compilation 'patch-el-files patch-el-files)
-    (add-after 'patch-el-files 'ensure-package-description
-      ensure-package-description)
     ;; The .el files are byte compiled directly in the store.
-    (add-after 'ensure-package-description 'build build)
+    (add-after 'install 'build build)
     (add-after 'build 'validate-compiled-autoloads validate-compiled-autoloads)
     (add-after 'validate-compiled-autoloads 'move-doc move-doc)))
 
diff --git a/guix/build/emacs-utils.scm b/guix/build/emacs-utils.scm
index 8e12b5b6d4..aeb364133a 100644
--- a/guix/build/emacs-utils.scm
+++ b/guix/build/emacs-utils.scm
@@ -136,7 +136,14 @@ If native code is not supported, compile to bytecode instead."
   (emacs-batch-eval
     `(let ((byte-compile-debug t)       ; for proper exit status
            (byte+native-compile (native-comp-available-p))
-           (files (directory-files-recursively ,dir "\\.el$")))
+           (files (directory-files-recursively ,dir "\\.el$"))
+           (write-bytecode
+            (and (native-comp-available-p)
+                 (progn
+                  (require 'comp)
+                  (if (fboundp 'comp-write-bytecode-file)
+                      'comp-write-bytecode-file
+                      'comp--write-bytecode-file)))))
        (mapc
         (lambda (file)
           (let (byte-to-native-output-buffer-file
@@ -146,11 +153,13 @@ If native code is not supported, compile to bytecode instead."
                               (cadr native-comp-eln-load-path))))
             (if byte+native-compile
                 (native-compile file
-                                (comp-el-to-eln-filename file eln-dir))
+                                (comp-el-to-eln-filename
+                                 (file-relative-name file ,dir)
+                                 eln-dir))
                 (byte-compile-file file))
             ;; After native compilation, write the bytecode file.
             (unless (null byte-to-native-output-buffer-file)
-              (comp-write-bytecode-file nil))))
+              (funcall write-bytecode nil))))
        files))
     #:dynamic? #t))