diff options
| -rw-r--r-- | gnu/packages/python-science.scm | 75 |
1 files changed, 75 insertions, 0 deletions
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 7f169f061d..3aa3edce17 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -35,6 +35,7 @@ #:use-module (gnu packages) #:use-module (gnu packages base) #:use-module (gnu packages check) + #:use-module (gnu packages databases) #:use-module (gnu packages gcc) #:use-module (gnu packages image-processing) #:use-module (gnu packages machine-learning) @@ -44,6 +45,7 @@ #:use-module (gnu packages pkg-config) #:use-module (gnu packages python) #:use-module (gnu packages python-build) + #:use-module (gnu packages python-crypto) #:use-module (gnu packages python-check) #:use-module (gnu packages python-web) #:use-module (gnu packages python-xyz) @@ -841,3 +843,76 @@ and more @end itemize") (license license:gpl3))) +(define-public python-distributed + (package + (name "python-distributed") + (version "2021.07.1") + (source + (origin + ;; The test files are not included in the archive on pypi + (method git-fetch) + (uri (git-reference + (url "https://github.com/dask/distributed") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0i55zf3k55sqjxnwlzsyj3h3v1588fn54ng4mj3dfiqzh3nlj0dg")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-references + (lambda* (#:key outputs #:allow-other-keys) + (substitute* '("distributed/comm/tests/test_ucx_config.py" + "distributed/tests/test_client.py" + "distributed/tests/test_queues.py" + "distributed/tests/test_variable.py" + "distributed/cli/tests/test_tls_cli.py" + "distributed/cli/tests/test_dask_spec.py" + "distributed/cli/tests/test_dask_worker.py" + "distributed/cli/tests/test_dask_scheduler.py") + (("\"dask-scheduler\"") + (format #false "\"~a/bin/dask-scheduler\"" + (assoc-ref outputs "out"))) + (("\"dask-worker\"") + (format #false "\"~a/bin/dask-worker\"" + (assoc-ref outputs "out")))))) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (setenv "DISABLE_IPV6" "1") + (invoke "pytest" "-vv" "distributed" + "-m" "not slow and not gpu and not ipython and not avoid_ci" + "-k" + ;; TODO: These tests fail for unknown reasons: + ;; Assertion error. + (string-append + "not test_version_option" + ;; "The 'distributed' distribution was not found" + " and not test_register_backend_entrypoint" + ;; "AttributeError: module 'distributed.dashboard' has no attribute 'scheduler'" + " and not test_get_client_functions_spawn_clusters")))))))) + (propagated-inputs + `(("python-click" ,python-click) + ("python-cloudpickle" ,python-cloudpickle) + ("python-cryptography" ,python-cryptography) + ("python-dask" ,python-dask) + ("python-msgpack" ,python-msgpack) + ("python-psutil" ,python-psutil) + ("python-pyyaml" ,python-pyyaml) + ("python-setuptools" ,python-setuptools) + ("python-sortedcontainers" ,python-sortedcontainers) + ("python-tblib" ,python-tblib) + ("python-toolz" ,python-toolz) + ("python-tornado" ,python-tornado-6) + ("python-zict" ,python-zict))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://distributed.dask.org") + (synopsis "Distributed scheduler for Dask") + (description "Dask.distributed is a lightweight library for distributed +computing in Python. It extends both the @code{concurrent.futures} and +@code{dask} APIs to moderate sized clusters.") + (license license:bsd-3))) + |