diff options
| -rw-r--r-- | gnu/packages/julia.scm | 39 |
1 files changed, 17 insertions, 22 deletions
diff --git a/gnu/packages/julia.scm b/gnu/packages/julia.scm index 0bdac66175..29c981189c 100644 --- a/gnu/packages/julia.scm +++ b/gnu/packages/julia.scm @@ -1,10 +1,10 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net> -;;; Copyright © 2016, 2020, 2021 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2020-2022 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2020, 2021 Nicolò Balzarotti <nicolo@nixo.xyz> ;;; Copyright © 2020 Tim Howes <timhowes@lavabit.com> ;;; Copyright © 2020 Tobias Geerinckx-Rice <me@tobias.gr> -;;; Copyright © 2021 Jean-Baptiste Volatier <jbv@pm.me> +;;; Copyright © 2021, 2022 Jean-Baptiste Volatier <jbv@pm.me> ;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com> ;;; Copyright © 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com> ;;; @@ -139,7 +139,7 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") (define-public julia (package (name "julia") - (version "1.6.3") + (version "1.6.7") (source (origin (method url-fetch) (uri (string-append @@ -147,7 +147,7 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") version "/julia-" version ".tar.gz")) (sha256 (base32 - "1515x8fs25l3f9csbmd1v4nm041zvjnvigy6s5iidy4yrkwdx4r5")) + "0q9xgdpvdkskpzl294w215f6c15c5jk276c9dah5f5w4np3ivbvl")) (patches (search-patches "julia-SOURCE_DATE_EPOCH-mtime.patch" "julia-allow-parallel-build.patch")))) @@ -206,6 +206,10 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") (substitute* "base/Makefile" (("\\$\\$\\(build_depsbindir\\)/libwhich") (search-input-file inputs "/bin/libwhich"))))) + (add-after 'unpack 'activate-gnu-source-for-loader + (lambda _ + (substitute* "cli/Makefile" + (("LOADER_CFLAGS =") "LOADER_CFLAGS = -D_GNU_SOURCE")))) (add-after 'unpack 'change-number-of-precompile-statements (lambda _ ;; Remove nss-certs drops the number of statements below 1200, @@ -222,12 +226,11 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") "base/Makefile") ((".*libquadmath.*") "")) (substitute* "Makefile" - (("libquadmath ") "")) - #t))) + (("libquadmath ") ""))))) '()) (add-before 'check 'set-home ;; Some tests require a home directory to be set. - (lambda _ (setenv "HOME" "/tmp") #t)) + (lambda _ (setenv "HOME" "/tmp"))) (add-before 'build 'fix-include-and-link-paths (lambda* (#:key inputs #:allow-other-keys) ;; LIBUTF8PROC is a linker flag, not a build target. It is @@ -332,10 +335,11 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") (mpfr (assoc-ref inputs "mpfr")) (gmp (assoc-ref inputs "gmp")) (nghttp2 (assoc-ref inputs "libnghttp2")) + (zlib (assoc-ref inputs "zlib")) (suitesparse (assoc-ref inputs "suitesparse"))) ;; Some tests only check to see if the input is the correct version. (substitute* "stdlib/PCRE2_jll/test/runtests.jl" - (("10.36.0") ,(package-version pcre2))) + (("10.40.0") ,(package-version pcre2))) (substitute* "stdlib/MbedTLS_jll/test/runtests.jl" (("2.24.0") ,(package-version mbedtls-apache))) (substitute* "stdlib/MPFR_jll/test/runtests.jl" @@ -344,6 +348,8 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") (("6.2.0") ,(package-version gmp))) (substitute* "stdlib/nghttp2_jll/test/runtests.jl" (("1.41.0") ,(package-version nghttp2))) + (substitute* "stdlib/Zlib_jll/test/runtests.jl" + (("1.2.12") ,(package-version zlib))) (substitute* "stdlib/SuiteSparse_jll/test/runtests.jl" (("5004") ,(string-replace-substring (version-major+minor @@ -355,17 +361,12 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") ;; https://github.com/JuliaLang/julia/pull/41614 ;; https://github.com/JuliaLang/julia/issues/41156 (substitute* "test/choosetests.jl" - (("skip_tests = \\[\\]") - "skip_tests = [\"REPL\", \"precompile\"]")) + (("\"precompile\",") "")) ;; Dates/io tests fail on master when networking is unavailable ;; https://github.com/JuliaLang/julia/issues/34655 (substitute* "stdlib/Dates/test/io.jl" (("using Dates") "import Dates using Dates: @dateformat_str, Date, DateTime, DateFormat, Time")) - ;; Upstream bug I found when packaging - ;; https://github.com/JuliaLang/julia/issues/35785 - (substitute* "test/file.jl" - (("@test dirname\\(t\\) == d") "@test_broken dirname(t) == d")) ;; julia embeds a certificate, we are not doing that (substitute* "stdlib/MozillaCACerts_jll/test/runtests.jl" (("@test isfile\\(MozillaCACerts_jll.cacert\\)") @@ -385,14 +386,7 @@ using Dates: @dateformat_str, Date, DateTime, DateFormat, Time")) (substitute* "test/cmdlineargs.jl" (("test v\\[3") "test_broken v[3") (("test isempty\\(v\\[3") "test_broken isempty(v[3")) - ;; These tests randomly fails because they depend on CPU. - (substitute* "stdlib/LinearAlgebra/test/matmul.jl" - ;; Fixed in v1.6.4 (see: - ;; https://github.com/JuliaLang/julia/blob/v1.6.4/ - ;; stdlib/LinearAlgebra/test/matmul.jl#L155). - (("@test mul\\!\\(C, vf, transpose\\(vf\\), 2, 3\\)\ - == 2vf\\*vf' \\.\\+ 3C0") - "@test mul!(C, vf, transpose(vf), 2, 3) ≈ 2vf*vf' .+ 3C0")) + ;; These test(s) randomly fails because they depend on CPU. (substitute* "test/math.jl" ;; @test_broken cannot be used because if the test randomly ;; passes, then it also raises an error. @@ -447,6 +441,7 @@ using Dates: @dateformat_str, Date, DateTime, DateFormat, Time")) ("" "$JULIA_DEPOT_PATH")))))))) #:make-flags (list + "VERBOSE=1" ;; more helpful logging of what make is doing (string-append "prefix=" (assoc-ref %outputs "out")) ;; Passing the MARCH or JULIA_CPU_TARGET flag is necessary to build |