diff options
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 137 | ||||
| -rw-r--r-- | gnu/packages/cran.scm | 137 |
2 files changed, 137 insertions, 137 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a9c62ab8b1..c1e1cd2df5 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -827,143 +827,6 @@ high-throughput sequence analysis. The package is primarily useful to developers of other R packages who wish to make use of HTSlib.") (license license:lgpl2.0+)))) -(define-public r-rhandsontable - (package - (name "r-rhandsontable") - (version "0.3.8") - (source (origin - (method url-fetch) - (uri (cran-uri "rhandsontable" version)) - (sha256 - (base32 - "07fj6npq65pq836vdwblkhprdaq4i4f13cwdmm9gmxrnk72xj7lh")) - (modules '((guix build utils))) - (snippet - '(with-directory-excursion "inst/htmlwidgets/lib" - (for-each delete-file - '("chroma/chroma.min.js" - "handsontable/all.min.js" - "handsontable/handsontable.full.min.js" - "jquery/jquery.min.js" - "numbro/languages.min.js" - "sparkline/jquery.sparkline.min.js")))))) - (properties `((upstream-name . "rhandsontable"))) - (build-system r-build-system) - (arguments - (list - #:modules '((guix build utils) - (guix build r-build-system) - (srfi srfi-1)) - #:phases - '(modify-phases %standard-phases - (add-after 'unpack 'process-javascript - (lambda* (#:key inputs #:allow-other-keys) - (with-directory-excursion "inst/htmlwidgets/lib" - ;; Generate languages.js by importing all numbro language - ;; files. - (with-output-to-file "/tmp/languages.js" - (lambda () - (for-each - (lambda (file) - (format (current-output-port) - "require(\"~a/~a\")~%" - (dirname file) - (basename file ".js"))) - (find-files (string-append (assoc-ref inputs "js-numbro") - "/languages/") - "\\.js$")))) - ;; Then bundle and minify it. - (invoke "esbuild" - "/tmp/languages.js" - "--bundle" - "--minify" - "--outfile=numbro/languages.min.js") - - ;; Minify the other source files. - (call-with-values - (lambda () - (unzip2 - `((,(search-input-file inputs "/chroma.js") - "chroma/chroma.min.js") - (,(search-input-file inputs "/dist/languages/all.js") - "handsontable/all.min.js") - (,(search-input-file inputs "/dist/handsontable.full.js") - "handsontable/handsontable.full.min.js") - (,(assoc-ref inputs "js-jquery-sparkline") - "sparkline/jquery.sparkline.min.js") - (,(assoc-ref inputs "js-jquery") - "jquery/jquery.min.js")))) - (lambda (sources targets) - (for-each (lambda (source target) - (format #true "Processing ~a --> ~a~%" - source target) - (invoke "esbuild" source "--minify" - (string-append "--outfile=" target))) - sources targets))))))))) - (propagated-inputs (list r-htmlwidgets r-jsonlite r-magrittr)) - (native-inputs - `(("esbuild" ,esbuild) - ("r-knitr" ,r-knitr) - ("js-chroma" - ,(origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/gka/chroma.js") - (commit "v1.3.3"))) - (file-name (git-file-name "chroma" "1.3.3")) - (sha256 - (base32 - "091xn40n868pgb76gdl5jpg5gqqqzhykgxsslni230jzgc0hh1vm")))) - ("js-handsontable" - ,(origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/handsontable/handsontable") - (commit "6.2.2"))) - (file-name (git-file-name "handsontable" "6.2.2")) - (sha256 - (base32 - "1rq4l24m9yz5r4sagdhq78jcjxlyh0ngryp43p5k33q2l77l4cp8")))) - ("js-jquery-sparkline" - ,(origin - (method url-fetch) - (uri - "https://omnipotent.net/jquery.sparkline/2.1.2/jquery.sparkline.js") - (sha256 - (base32 - "0d28qg5wlv44l02xafla6h6fvl3a71r5w7k0xhadagighh5wnarg")))) - ("js-jquery" - ,(origin - (method url-fetch) - (uri "https://code.jquery.com/jquery-3.2.1.js") - (sha256 - (base32 - "08dv528xy8ksrg5qqw73bvpjrzxv66xq41sfidn9ypgskwl2g40d")))) - ;; We guessed the version based on - ;; 62993ac9be3a1a4188150f7a6502b48b899f075e in - ;; https://github.com/jrowen/rhandsontable, which added numbro's - ;; languages.min.js. This was committed in Nov 2018, so the most - ;; recent release of numbro at that time would have been 2.0.6 from May - ;; 2018. - ("js-numbro" - ,(origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/BenjaminVanRyseghem/numbro") - (commit "2.0.6"))) - (file-name (git-file-name "numbro" "2.0.6")) - (sha256 - (base32 - "1gsswkd482p0id00yx4q67ay0jvvwwidj71v41mq1cws8v2jjywx")))))) - (home-page "https://jrowen.github.io/rhandsontable/") - (synopsis "Htmlwidget based on the handsontable.js library") - (description - "Handsontable is a data grid component with an Excel like appearance. -Built in JavaScript, it integrates with any data source with peak efficiency. -It comes with powerful features like data validation, sorting, grouping, data -binding, formula support or column ordering.") - (license license:expat))) - (define-public r-stringendo (let ((commit "83b8f2d82a09b33b9e895438bb523a021138be01") (revision "1")) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 2748ae6ca7..803c4e0b6e 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -23590,6 +23590,143 @@ tests and comparing mean, variance, skewness and kurtosis of the data with the fitted distribution.") (license license:gpl3+))) +(define-public r-rhandsontable + (package + (name "r-rhandsontable") + (version "0.3.8") + (source (origin + (method url-fetch) + (uri (cran-uri "rhandsontable" version)) + (sha256 + (base32 + "07fj6npq65pq836vdwblkhprdaq4i4f13cwdmm9gmxrnk72xj7lh")) + (modules '((guix build utils))) + (snippet + '(with-directory-excursion "inst/htmlwidgets/lib" + (for-each delete-file + '("chroma/chroma.min.js" + "handsontable/all.min.js" + "handsontable/handsontable.full.min.js" + "jquery/jquery.min.js" + "numbro/languages.min.js" + "sparkline/jquery.sparkline.min.js")))))) + (properties `((upstream-name . "rhandsontable"))) + (build-system r-build-system) + (arguments + (list + #:modules '((guix build utils) + (guix build r-build-system) + (srfi srfi-1)) + #:phases + '(modify-phases %standard-phases + (add-after 'unpack 'process-javascript + (lambda* (#:key inputs #:allow-other-keys) + (with-directory-excursion "inst/htmlwidgets/lib" + ;; Generate languages.js by importing all numbro language + ;; files. + (with-output-to-file "/tmp/languages.js" + (lambda () + (for-each + (lambda (file) + (format (current-output-port) + "require(\"~a/~a\")~%" + (dirname file) + (basename file ".js"))) + (find-files (string-append (assoc-ref inputs "js-numbro") + "/languages/") + "\\.js$")))) + ;; Then bundle and minify it. + (invoke "esbuild" + "/tmp/languages.js" + "--bundle" + "--minify" + "--outfile=numbro/languages.min.js") + + ;; Minify the other source files. + (call-with-values + (lambda () + (unzip2 + `((,(search-input-file inputs "/chroma.js") + "chroma/chroma.min.js") + (,(search-input-file inputs "/dist/languages/all.js") + "handsontable/all.min.js") + (,(search-input-file inputs "/dist/handsontable.full.js") + "handsontable/handsontable.full.min.js") + (,(assoc-ref inputs "js-jquery-sparkline") + "sparkline/jquery.sparkline.min.js") + (,(assoc-ref inputs "js-jquery") + "jquery/jquery.min.js")))) + (lambda (sources targets) + (for-each (lambda (source target) + (format #true "Processing ~a --> ~a~%" + source target) + (invoke "esbuild" source "--minify" + (string-append "--outfile=" target))) + sources targets))))))))) + (propagated-inputs (list r-htmlwidgets r-jsonlite r-magrittr)) + (native-inputs + `(("esbuild" ,esbuild) + ("r-knitr" ,r-knitr) + ("js-chroma" + ,(origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/gka/chroma.js") + (commit "v1.3.3"))) + (file-name (git-file-name "chroma" "1.3.3")) + (sha256 + (base32 + "091xn40n868pgb76gdl5jpg5gqqqzhykgxsslni230jzgc0hh1vm")))) + ("js-handsontable" + ,(origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/handsontable/handsontable") + (commit "6.2.2"))) + (file-name (git-file-name "handsontable" "6.2.2")) + (sha256 + (base32 + "1rq4l24m9yz5r4sagdhq78jcjxlyh0ngryp43p5k33q2l77l4cp8")))) + ("js-jquery-sparkline" + ,(origin + (method url-fetch) + (uri + "https://omnipotent.net/jquery.sparkline/2.1.2/jquery.sparkline.js") + (sha256 + (base32 + "0d28qg5wlv44l02xafla6h6fvl3a71r5w7k0xhadagighh5wnarg")))) + ("js-jquery" + ,(origin + (method url-fetch) + (uri "https://code.jquery.com/jquery-3.2.1.js") + (sha256 + (base32 + "08dv528xy8ksrg5qqw73bvpjrzxv66xq41sfidn9ypgskwl2g40d")))) + ;; We guessed the version based on + ;; 62993ac9be3a1a4188150f7a6502b48b899f075e in + ;; https://github.com/jrowen/rhandsontable, which added numbro's + ;; languages.min.js. This was committed in Nov 2018, so the most + ;; recent release of numbro at that time would have been 2.0.6 from May + ;; 2018. + ("js-numbro" + ,(origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/BenjaminVanRyseghem/numbro") + (commit "2.0.6"))) + (file-name (git-file-name "numbro" "2.0.6")) + (sha256 + (base32 + "1gsswkd482p0id00yx4q67ay0jvvwwidj71v41mq1cws8v2jjywx")))))) + (home-page "https://jrowen.github.io/rhandsontable/") + (synopsis "Htmlwidget based on the handsontable.js library") + (description + "Handsontable is a data grid component with an Excel like appearance. +Built in JavaScript, it integrates with any data source with peak efficiency. +It comes with powerful features like data validation, sorting, grouping, data +binding, formula support or column ordering.") + (license license:expat))) + (define-public r-rhpcblasctl (package (name "r-rhpcblasctl") |