diff options
| -rw-r--r-- | gnu/packages/bioconductor.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 8aa0b5bd85..adf0542410 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2197,6 +2197,32 @@ as @code{genesInRange()}, @code{geneToExon()}, @code{exonDetails()}, etc. Functions to plot gene architecture and BAM file data are also provided.") (license license:gpl2))) +(define-public r-antiprofiles + (package + (name "r-antiprofiles") + (version "1.36.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "antiProfiles" version)) + (sha256 + (base32 + "1277kg5xpyb2yriyjy18p437q5lj22h4al7z7pygkzxzywxv9g40")))) + (properties `((upstream-name . "antiProfiles"))) + (build-system r-build-system) + (propagated-inputs + (list r-locfit + r-matrixstats)) + (home-page "https://github.com/HCBravoLab/antiProfiles") + (synopsis "Implementation of gene expression anti-profiles") + (description + "This package implements the gene expression anti-profiles method. +Anti-profiles are a new approach for developing cancer genomic signatures that +specifically take advantage of gene expression heterogeneity. They explicitly +model increased gene expression variability in cancer to define robust and +reproducible gene expression signatures capable of accurately distinguishing +tumor samples from healthy controls.") + (license license:artistic2.0))) + (define-public r-biocversion (package (name "r-biocversion") |