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| -rw-r--r-- | gnu/packages/cran.scm | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index b09d46678a..6ef2066429 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -15335,3 +15335,33 @@ an approach to manipulate these two virtual data frames using the API defined in the @code{dplyr} package, and it also provides tidy interfaces to a lot of common graph algorithms.") (license license:expat))) + +(define-public r-soupx + (let ((commit "a3354be76fb52fd795be6ddf163cf056c05c6cb8") + (revision "1")) + (package + (name "r-soupx") + (version (git-version "0.3.1" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/constantAmateur/SoupX") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1zmlyzrl0fz6l79gn2wswid670p88mm3y292is89sa5p3h7frr99")))) + (properties `((upstream-name . "SoupX"))) + (build-system r-build-system) + (propagated-inputs + `(("r-ggplot2" ,r-ggplot2) + ("r-matrix" ,r-matrix) + ("r-seurat" ,r-seurat))) + (home-page "https://github.com/constantAmateur/SoupX") + (synopsis "Single cell mRNA Soup eXterminator") + (description + "This package provides a package for quantifying, profiling and +removing cell free mRNA contamination (the \"soup\") from droplet based single +cell RNA-seq experiments.") + (license license:gpl2)))) |