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| -rw-r--r-- | gnu/packages/cran.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index aa9a063a76..16d576ecee 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -9024,3 +9024,29 @@ stack groups of columns and to reshape wide data, even when the data are and which @code{melt} and @code{dcast} from @code{reshape2} do not easily handle.") (license license:gpl3))) + +(define-public r-tfmpvalue + (package + (name "r-tfmpvalue") + (version "0.0.8") + (source + (origin + (method url-fetch) + (uri (cran-uri "TFMPvalue" version)) + (sha256 + (base32 + "0h9qkl15k8v17v3g9bdnfwvh2s04ywjgg5y0xn2077dmywlja1bd")))) + (properties `((upstream-name . "TFMPvalue"))) + (build-system r-build-system) + (propagated-inputs `(("r-rcpp" ,r-rcpp))) + (home-page "https://github.com/ge11232002/TFMPvalue") + (synopsis "P-value computation for position weight matrices") + (description + "In putative @dfn{Transcription Factor Binding Sites} (TFBSs) +identification from sequence/alignments, we are interested in the significance +of certain match scores. TFMPvalue provides the accurate calculation of a +p-value with a score threshold for position weight matrices, or the score with +a given p-value. It is an interface to code originally made available by +Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15. +Touzet and Varre (2007).") + (license license:gpl2))) |