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| -rw-r--r-- | gnu/packages/python-science.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 2f4f1818f3..ff82a97fc9 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -564,6 +564,29 @@ higher scores.") analysis} (PCA), SVD, and eigendecompositions via randomized methods") (license license:bsd-3))) +(define-public python-geosketch + (package + (name "python-geosketch") + (version "1.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "geosketch" version)) + (sha256 + (base32 + "0knch5h0p8xpm8bi3b5mxyaf1ywwimrsdmbnc1xr5icidcv9gzmv")))) + (build-system python-build-system) + (arguments '(#:tests? #false)) ;there are none + (propagated-inputs (list python-fbpca python-numpy python-scikit-learn)) + (home-page "https://github.com/brianhie/geosketch") + (synopsis "Geometry-preserving random sampling") + (description "geosketch is a Python package that implements the geometric +sketching algorithm described by Brian Hie, Hyunghoon Cho, Benjamin DeMeo, +Bryan Bryson, and Bonnie Berger in \"Geometric sketching compactly summarizes +the single-cell transcriptomic landscape\", Cell Systems (2019). This package +provides an example implementation of the algorithm as well as scripts +necessary for reproducing the experiments in the paper.") + (license license:expat))) + (define-public python-xarray (package (name "python-xarray") |