diff options
| -rw-r--r-- | gnu/packages/bioconductor.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 83f8343524..37a3b776e9 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1030,6 +1030,31 @@ provides access to @dfn{GeneChip Operating System} (GCOS) and @dfn{GeneChip Command Console} (AGCC)-compatible sample annotation files.") (license license:artistic2.0))) +(define-public r-affycontam + (package + (name "r-affycontam") + (version "1.42.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "affyContam" version)) + (sha256 + (base32 + "0nzk1cm26rhmym753wyhn35hqnz5lvavi3i5qfgdvhxgjy3m1jgp")))) + (properties `((upstream-name . "affyContam"))) + (build-system r-build-system) + (propagated-inputs + `(("r-affy" ,r-affy) + ("r-affydata" ,r-affydata) + ("r-biobase" ,r-biobase))) + (home-page "https://bioconductor.org/packages/affyContam/") + (synopsis "Structured corruption of Affymetrix CEL file data") + (description + "Microarray quality assessment is a major concern of microarray analysts. +This package provides some simple approaches to in silico creation of quality +problems in CEL-level data to help evaluate performance of quality metrics.") + (license license:artistic2.0))) + (define-public r-annotate (package (name "r-annotate") |