diff options
| -rw-r--r-- | gnu/packages/julia.scm | 434 |
1 files changed, 217 insertions, 217 deletions
diff --git a/gnu/packages/julia.scm b/gnu/packages/julia.scm index 65a5e42beb..146c1e5a91 100644 --- a/gnu/packages/julia.scm +++ b/gnu/packages/julia.scm @@ -58,8 +58,8 @@ (source (origin (method git-fetch) (uri (git-reference - (url "https://github.com/JuliaLang/libuv.git") - (commit commit))) + (url "https://github.com/JuliaLang/libuv.git") + (commit commit))) (file-name (string-append name "-" version "-checkout")) (sha256 (base32 @@ -74,14 +74,14 @@ (define (llvm-patch-url version name) (string-append "https://raw.githubusercontent.com/JuliaLang/julia/v" version - "/deps/patches/" name)) + "/deps/patches/" name)) (define (llvm-patch name sha) (let ((version "1.1.1")) (origin (method url-fetch) - (uri (llvm-patch-url version name)) - (sha256 (base32 sha)) - (file-name name)))) + (uri (llvm-patch-url version name)) + (sha256 (base32 sha)) + (file-name name)))) (define llvm-julia (package @@ -98,62 +98,62 @@ ;; but they are required to build Julia. ;; Discussion: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=919628 (patches - (list - (llvm-patch "llvm-6.0-D44650.patch" - "1336q4vqayr94wdcnlmcxh90mjdh34dzw9x2cbiqjnx9b1j8fxyb") - (llvm-patch "llvm-6.0-DISABLE_ABI_CHECKS.patch" - "014fawd1ba7yckalypfld22zgic87x9nx3cim42zrwygywd36pyg") - (llvm-patch "llvm-6.0-NVPTX-addrspaces.patch" - "1qdi2zmrjsrj0h84zv2vyly2hjcn4f67mfy0s1q353g4v4jkscqc") - (llvm-patch "llvm-6.0.0_D27296-libssp.patch" - "0s5hi2r1j63i8m6ig1346crx2aiv9f7rgb3mg80kw1wx5y7pdpfh") - (llvm-patch "llvm-D27629-AArch64-large_model_6.0.1.patch" - "1qrshmlqvnasdyc158vfn3hnbigqph3lsq7acb9w8lwkpnnm2j4z") - (llvm-patch "llvm-D34078-vectorize-fdiv.patch" - "1696hg84a0jxcnggvqsc2cdp271hf9a44p4qsd078qm1mfawkaay") - (llvm-patch "llvm-D42262-jumpthreading-not-i1.patch" - "1c8w210gwidbnkkw8anp17dk5pnxws2fl3mb2qxh7y9wzfpixgaq") - (llvm-patch "llvm-D44892-Perf-integration.patch" - "0r37jd0ssh2k1pndkfd5blgpg9z90im4vlzprhb0n0wwz45g4b05") - (llvm-patch "llvm-D46460.patch" - "1miqgswdc0qvbaf4571c2xkxyp9ais06b1bcpa83sq22vr4hbsfb") - (llvm-patch "llvm-D49832-SCEVPred.patch" - "0v5c88hgqj6dymv3j86ca5mhpqab5fbnrvjiw1nvnrnya9l4dlbn") - (llvm-patch "llvm-D50010-VNCoercion-ni.patch" - "0iblb3q1xixwrb12jpb89h3ywmqmzdp6aqp416j4ncwakyjhhfkp") - (llvm-patch "llvm-D50167-scev-umin.patch" - "1f2rakcnnyhr7w10k7gqg0k0491pyvx5ijplivw557f714ys3q6v") - (llvm-patch "llvm-OProfile-line-num.patch" - "1jvbbmwyags0xfwamb13qrf3rgcz9i1r03m9lava7swag8xb78c7") - (llvm-patch "llvm-PPC-addrspaces.patch" - "1f23nhsxh2s3jskbgs7da9nwg3s1hrkbk5aahl08x41wi3mny01p") - (llvm-patch "llvm-rL323946-LSRTy.patch" - "10cz3vy1yw0w643z7xx021wa4kymx9fcm3bjg61s6vzdqd6d9fns") - (llvm-patch "llvm-rL326967-aligned-load.patch" - "04jxnv32yj5x17hqhi8g2p8rhgp38gmjzr871w7z8s44pq10v9v4") - (llvm-patch "llvm-rL327898.patch" - "15ah49gbsll23z28kpyahi5vl0fh3fkxcgd1zmxxdcl96s3x8bnq"))))) + (list + (llvm-patch "llvm-6.0-D44650.patch" + "1336q4vqayr94wdcnlmcxh90mjdh34dzw9x2cbiqjnx9b1j8fxyb") + (llvm-patch "llvm-6.0-DISABLE_ABI_CHECKS.patch" + "014fawd1ba7yckalypfld22zgic87x9nx3cim42zrwygywd36pyg") + (llvm-patch "llvm-6.0-NVPTX-addrspaces.patch" + "1qdi2zmrjsrj0h84zv2vyly2hjcn4f67mfy0s1q353g4v4jkscqc") + (llvm-patch "llvm-6.0.0_D27296-libssp.patch" + "0s5hi2r1j63i8m6ig1346crx2aiv9f7rgb3mg80kw1wx5y7pdpfh") + (llvm-patch "llvm-D27629-AArch64-large_model_6.0.1.patch" + "1qrshmlqvnasdyc158vfn3hnbigqph3lsq7acb9w8lwkpnnm2j4z") + (llvm-patch "llvm-D34078-vectorize-fdiv.patch" + "1696hg84a0jxcnggvqsc2cdp271hf9a44p4qsd078qm1mfawkaay") + (llvm-patch "llvm-D42262-jumpthreading-not-i1.patch" + "1c8w210gwidbnkkw8anp17dk5pnxws2fl3mb2qxh7y9wzfpixgaq") + (llvm-patch "llvm-D44892-Perf-integration.patch" + "0r37jd0ssh2k1pndkfd5blgpg9z90im4vlzprhb0n0wwz45g4b05") + (llvm-patch "llvm-D46460.patch" + "1miqgswdc0qvbaf4571c2xkxyp9ais06b1bcpa83sq22vr4hbsfb") + (llvm-patch "llvm-D49832-SCEVPred.patch" + "0v5c88hgqj6dymv3j86ca5mhpqab5fbnrvjiw1nvnrnya9l4dlbn") + (llvm-patch "llvm-D50010-VNCoercion-ni.patch" + "0iblb3q1xixwrb12jpb89h3ywmqmzdp6aqp416j4ncwakyjhhfkp") + (llvm-patch "llvm-D50167-scev-umin.patch" + "1f2rakcnnyhr7w10k7gqg0k0491pyvx5ijplivw557f714ys3q6v") + (llvm-patch "llvm-OProfile-line-num.patch" + "1jvbbmwyags0xfwamb13qrf3rgcz9i1r03m9lava7swag8xb78c7") + (llvm-patch "llvm-PPC-addrspaces.patch" + "1f23nhsxh2s3jskbgs7da9nwg3s1hrkbk5aahl08x41wi3mny01p") + (llvm-patch "llvm-rL323946-LSRTy.patch" + "10cz3vy1yw0w643z7xx021wa4kymx9fcm3bjg61s6vzdqd6d9fns") + (llvm-patch "llvm-rL326967-aligned-load.patch" + "04jxnv32yj5x17hqhi8g2p8rhgp38gmjzr871w7z8s44pq10v9v4") + (llvm-patch "llvm-rL327898.patch" + "15ah49gbsll23z28kpyahi5vl0fh3fkxcgd1zmxxdcl96s3x8bnq"))))) (arguments (substitute-keyword-arguments (package-arguments llvm-6) ((#:configure-flags flags) `(list ;; Taken from NixOS. Only way I could get libLLVM-6.0.so - "-DCMAKE_BUILD_TYPE=Release" + "-DCMAKE_BUILD_TYPE=Release" - ;; Build a native compiler and the NVPTX backend (NVIDIA) since - ;; Julia insists on it, nothing more. This reduces build times and - ;; disk usage. - ,(string-append "-DLLVM_TARGETS_TO_BUILD=" (system->llvm-target)) - "-DLLVM_EXPERIMENTAL_TARGETS_TO_BUILD=NVPTX" + ;; Build a native compiler and the NVPTX backend (NVIDIA) since + ;; Julia insists on it, nothing more. This reduces build times and + ;; disk usage. + ,(string-append "-DLLVM_TARGETS_TO_BUILD=" (system->llvm-target)) + "-DLLVM_EXPERIMENTAL_TARGETS_TO_BUILD=NVPTX" - "-DLLVM_INSTALL_UTILS=ON" - "-DLLVM_BUILD_TESTS=ON" - "-DLLVM_ENABLE_FFI=ON" - "-DLLVM_ENABLE_RTTI=ON" - ;; "-DLLVM_HOST_TRIPLE=${stdenv.hostPlatform.config}" - ;; "-DLLVM_DEFAULT_TARGET_TRIPLE=${stdenv.hostPlatform.config}" - ;; "-DLLVM_EXPERIMENTAL_TARGETS_TO_BUILD=WebAssembly" - "-DLLVM_ENABLE_DUMP=ON" - "-DLLVM_LINK_LLVM_DYLIB=ON")))))) + "-DLLVM_INSTALL_UTILS=ON" + "-DLLVM_BUILD_TESTS=ON" + "-DLLVM_ENABLE_FFI=ON" + "-DLLVM_ENABLE_RTTI=ON" + ;; "-DLLVM_HOST_TRIPLE=${stdenv.hostPlatform.config}" + ;; "-DLLVM_DEFAULT_TARGET_TRIPLE=${stdenv.hostPlatform.config}" + ;; "-DLLVM_EXPERIMENTAL_TARGETS_TO_BUILD=WebAssembly" + "-DLLVM_ENABLE_DUMP=ON" + "-DLLVM_LINK_LLVM_DYLIB=ON")))))) (define-public julia (package @@ -204,16 +204,16 @@ (copy-file (assoc-ref inputs "rmath") "deps/srccache/Rmath-julia-0.1.tar.gz") - ;; needed by libwhich - (setenv "LD_LIBRARY_PATH" - (string-join (map (lambda (pkg) + ;; needed by libwhich + (setenv "LD_LIBRARY_PATH" + (string-join (map (lambda (pkg) (string-append (assoc-ref inputs pkg) "/lib")) '("arpack-ng" "fftw" "gmp" "lapack" - "libgit2" "mpfr" "openblas" "openlibm" - "openspecfun" "pcre2")) + "libgit2" "mpfr" "openblas" "openlibm" + "openspecfun" "pcre2")) ":")) - #t)) + #t)) ;; FIXME: Building the documentation requires Julia packages that ;; would be downloaded from the Internet. We should build them in a ;; separate build phase. @@ -229,77 +229,77 @@ ;; Some tests require a home directory to be set. (lambda _ (setenv "HOME" "/tmp") #t)) (add-after 'unpack 'hardcode-soname-map - ;; ./src/runtime_ccall.cpp creates a map from library names to paths - ;; using the output of "/sbin/ldconfig -p". Since ldconfig is not - ;; used in Guix, we patch runtime_ccall.cpp to contain a static map. - (lambda* (#:key inputs #:allow-other-keys) - (use-modules (ice-9 match)) - (substitute* "src/runtime_ccall.cpp" - ;; Patch out invocations of '/sbin/ldconfig' to avoid getting - ;; error messages about missing '/sbin/ldconfig' on Guix System. - (("popen\\(.*ldconfig.*\\);") - "NULL;\n") + ;; ./src/runtime_ccall.cpp creates a map from library names to paths + ;; using the output of "/sbin/ldconfig -p". Since ldconfig is not + ;; used in Guix, we patch runtime_ccall.cpp to contain a static map. + (lambda* (#:key inputs #:allow-other-keys) + (use-modules (ice-9 match)) + (substitute* "src/runtime_ccall.cpp" + ;; Patch out invocations of '/sbin/ldconfig' to avoid getting + ;; error messages about missing '/sbin/ldconfig' on Guix System. + (("popen\\(.*ldconfig.*\\);") + "NULL;\n") - ;; Populate 'sonameMap'. - (("jl_read_sonames.*;") - (string-join - (map (match-lambda - ((input libname soname) - (string-append - "sonameMap[\"" libname "\"] = " - "\"" (assoc-ref inputs input) "/lib/" soname "\";"))) - '(("libc" "libc" "libc.so.6") - ("pcre2" "libpcre2-8" "libpcre2-8.so") - ("mpfr" "libmpfr" "libmpfr.so") - ("openblas" "libblas" "libopenblas.so") - ("arpack-ng" "libarpack" "libarpack.so") - ("lapack" "liblapack" "liblapack.so") - ("libgit2" "libgit2" "libgit2.so") - ("gmp" "libgmp" "libgmp.so") - ("openspecfun" "libopenspecfun" "libopenspecfun.so") - ("fftw" "libfftw3" "libfftw3_threads.so") - ("fftwf" "libfftw3f" "libfftw3f_threads.so")))))) - (substitute* "base/math.jl" - (("const libm = Base.libm_name") - (string-append "const libm = \"" - (assoc-ref inputs "openlibm") - "/lib/libopenlibm.so" - "\"")) - (("const openspecfun = \"libopenspecfun\"") - (string-append "const openspecfun = \"" - (assoc-ref inputs "openspecfun") - "/lib/libopenspecfun.so" - "\""))) - #t)) + ;; Populate 'sonameMap'. + (("jl_read_sonames.*;") + (string-join + (map (match-lambda + ((input libname soname) + (string-append + "sonameMap[\"" libname "\"] = " + "\"" (assoc-ref inputs input) "/lib/" soname "\";"))) + '(("libc" "libc" "libc.so.6") + ("pcre2" "libpcre2-8" "libpcre2-8.so") + ("mpfr" "libmpfr" "libmpfr.so") + ("openblas" "libblas" "libopenblas.so") + ("arpack-ng" "libarpack" "libarpack.so") + ("lapack" "liblapack" "liblapack.so") + ("libgit2" "libgit2" "libgit2.so") + ("gmp" "libgmp" "libgmp.so") + ("openspecfun" "libopenspecfun" "libopenspecfun.so") + ("fftw" "libfftw3" "libfftw3_threads.so") + ("fftwf" "libfftw3f" "libfftw3f_threads.so")))))) + (substitute* "base/math.jl" + (("const libm = Base.libm_name") + (string-append "const libm = \"" + (assoc-ref inputs "openlibm") + "/lib/libopenlibm.so" + "\"")) + (("const openspecfun = \"libopenspecfun\"") + (string-append "const openspecfun = \"" + (assoc-ref inputs "openspecfun") + "/lib/libopenspecfun.so" + "\""))) + #t)) (add-before 'build 'fix-include-and-link-paths - (lambda* (#:key inputs #:allow-other-keys) - ;; LIBUTF8PROC is a linker flag, not a build target. It is - ;; included in the LIBFILES_* variable which is used as a - ;; collection of build targets and a list of libraries to link - ;; against. - (substitute* "src/flisp/Makefile" - (("\\$\\(BUILDDIR\\)/\\$\\(EXENAME\\): \\$\\(OBJS\\) \\$\\(LIBFILES_release\\)") - "$(BUILDDIR)/$(EXENAME): $(OBJS) $(LLT_release)") - (("\\$\\(BUILDDIR\\)/\\$\\(EXENAME\\)-debug: \\$\\(DOBJS\\) \\$\\(LIBFILES_debug\\)") - "$(BUILDDIR)/$(EXENAME)-debug: $(DOBJS) $(LLT_debug)")) + (lambda* (#:key inputs #:allow-other-keys) + ;; LIBUTF8PROC is a linker flag, not a build target. It is + ;; included in the LIBFILES_* variable which is used as a + ;; collection of build targets and a list of libraries to link + ;; against. + (substitute* "src/flisp/Makefile" + (("\\$\\(BUILDDIR\\)/\\$\\(EXENAME\\): \\$\\(OBJS\\) \\$\\(LIBFILES_release\\)") + "$(BUILDDIR)/$(EXENAME): $(OBJS) $(LLT_release)") + (("\\$\\(BUILDDIR\\)/\\$\\(EXENAME\\)-debug: \\$\\(DOBJS\\) \\$\\(LIBFILES_debug\\)") + "$(BUILDDIR)/$(EXENAME)-debug: $(DOBJS) $(LLT_debug)")) - ;; The REPL must be linked with libuv. - (substitute* "ui/Makefile" - (("JLDFLAGS \\+= ") - (string-append "JLDFLAGS += " - (assoc-ref %build-inputs "libuv") - "/lib/libuv.so "))) + ;; The REPL must be linked with libuv. + (substitute* "ui/Makefile" + (("JLDFLAGS \\+= ") + (string-append "JLDFLAGS += " + (assoc-ref %build-inputs "libuv") + "/lib/libuv.so "))) - (substitute* "base/Makefile" - (("\\$\\(build_includedir\\)/uv/errno.h") - (string-append (assoc-ref inputs "libuv") - "/include/uv/errno.h"))) - #t)) + (substitute* "base/Makefile" + (("\\$\\(build_includedir\\)/uv/errno.h") + (string-append (assoc-ref inputs "libuv") + "/include/uv/errno.h"))) + #t)) (add-before 'build 'replace-default-shell - (lambda _ - (substitute* "base/client.jl" - (("/bin/sh") (which "sh"))) - #t)) + (lambda _ + (substitute* "base/client.jl" + (("/bin/sh") (which "sh"))) + #t)) (add-after 'unpack 'hardcode-paths (lambda _ (substitute* "stdlib/InteractiveUtils/src/InteractiveUtils.jl" @@ -310,88 +310,88 @@ (lambda _ (define (touch file-name) (call-with-output-file file-name (const #t))) - ;; FIXME: All git tests works except this one. But *THIS* "fix" + ;; FIXME: All git tests works except this one. But *THIS* "fix" ;; is not working, so right now I'm disabling all libgit2.jl tests - ;; (substitute* "stdlib/LibGit2/test/libgit2.jl" - ;; (("!LibGit2.use_http_path(cfg, github_cred)") "true") - ;; (("LibGit2.use_http_path(cfg, mygit_cred)") "true")) + ;; (substitute* "stdlib/LibGit2/test/libgit2.jl" + ;; (("!LibGit2.use_http_path(cfg, github_cred)") "true") + ;; (("LibGit2.use_http_path(cfg, mygit_cred)") "true")) (map (lambda (test) (delete-file test) (touch test)) - '("stdlib/Sockets/test/runtests.jl" - "stdlib/Distributed/test/runtests.jl" + '("stdlib/Sockets/test/runtests.jl" + "stdlib/Distributed/test/runtests.jl" ;; FIXME: see above - "stdlib/LibGit2/test/libgit2.jl")) - (substitute* "test/choosetests.jl" - ;; These tests fail, probably because some of the input - ;; binaries have been stripped and thus backtraces don't look - ;; as expected. - (("\"backtrace\",") "") - (("\"cmdlineargs\",") "")) - #t))) + "stdlib/LibGit2/test/libgit2.jl")) + (substitute* "test/choosetests.jl" + ;; These tests fail, probably because some of the input + ;; binaries have been stripped and thus backtraces don't look + ;; as expected. + (("\"backtrace\",") "") + (("\"cmdlineargs\",") "")) + #t))) #:make-flags (list - (string-append "prefix=" (assoc-ref %outputs "out")) - (string-append "PREFIX=" (assoc-ref %outputs "out")) + (string-append "prefix=" (assoc-ref %outputs "out")) + (string-append "PREFIX=" (assoc-ref %outputs "out")) - ;; Passing the MARCH flag is necessary to build binary substitutes for - ;; the supported architectures. - ,(match (or (%current-target-system) - (%current-system)) - ("x86_64-linux" "MARCH=x86-64") - ("i686-linux" "MARCH=pentium4") - ("aarch64-linux" "MARCH=armv8-a") - ;; Prevent errors when querying this package on unsupported - ;; platforms, e.g. when running "guix package --search=" - (_ "MARCH=UNSUPPORTED")) + ;; Passing the MARCH flag is necessary to build binary substitutes for + ;; the supported architectures. + ,(match (or (%current-target-system) + (%current-system)) + ("x86_64-linux" "MARCH=x86-64") + ("i686-linux" "MARCH=pentium4") + ("aarch64-linux" "MARCH=armv8-a") + ;; Prevent errors when querying this package on unsupported + ;; platforms, e.g. when running "guix package --search=" + (_ "MARCH=UNSUPPORTED")) - "CONFIG_SHELL=bash" ;needed to build bundled libraries - "USE_SYSTEM_DSFMT=0" ;not packaged for Guix and upstream has no - ;build system for a shared library. - "USE_SYSTEM_LAPACK=1" - "USE_SYSTEM_BLAS=1" - "USE_BLAS64=0" ;needed when USE_SYSTEM_BLAS=1 - "LIBBLAS=-lopenblas" - "LIBBLASNAME=libopenblas" + "CONFIG_SHELL=bash" ;needed to build bundled libraries + "USE_SYSTEM_DSFMT=0" ;not packaged for Guix and upstream has no + ;build system for a shared library. + "USE_SYSTEM_LAPACK=1" + "USE_SYSTEM_BLAS=1" + "USE_BLAS64=0" ;needed when USE_SYSTEM_BLAS=1 + "LIBBLAS=-lopenblas" + "LIBBLASNAME=libopenblas" - "USE_SYSTEM_FFTW=1" - "LIBFFTWNAME=libfftw3" - "LIBFFTWFNAME=libfftw3f" + "USE_SYSTEM_FFTW=1" + "LIBFFTWNAME=libfftw3" + "LIBFFTWFNAME=libfftw3f" - ;; TODO: Suitesparse does not install shared libraries, so we cannot - ;; use the suitesparse package. - ;; "USE_SYSTEM_SUITESPARSE=1" - ;; (string-append "SUITESPARSE_INC=-I " - ;; (assoc-ref %build-inputs "suitesparse") - ;; "/include") + ;; TODO: Suitesparse does not install shared libraries, so we cannot + ;; use the suitesparse package. + ;; "USE_SYSTEM_SUITESPARSE=1" + ;; (string-append "SUITESPARSE_INC=-I " + ;; (assoc-ref %build-inputs "suitesparse") + ;; "/include") - "USE_GPL_LIBS=1" ;proudly - "USE_SYSTEM_UTF8PROC=1" - (string-append "UTF8PROC_INC=" - (assoc-ref %build-inputs "utf8proc") - "/include") - "USE_SYSTEM_LLVM=1" - "LLVM_VER=6.0.1" + "USE_GPL_LIBS=1" ;proudly + "USE_SYSTEM_UTF8PROC=1" + (string-append "UTF8PROC_INC=" + (assoc-ref %build-inputs "utf8proc") + "/include") + "USE_SYSTEM_LLVM=1" + "LLVM_VER=6.0.1" - "USE_LLVM_SHLIB=1" - "USE_SYSTEM_LIBUNWIND=1" - "USE_SYSTEM_LIBUV=1" - (string-append "LIBUV=" - (assoc-ref %build-inputs "libuv") - "/lib/libuv.so") - (string-append "LIBUV_INC=" - (assoc-ref %build-inputs "libuv") - "/include") - "USE_SYSTEM_PATCHELF=1" - "USE_SYSTEM_PCRE=1" - "USE_SYSTEM_OPENLIBM=1" + "USE_LLVM_SHLIB=1" + "USE_SYSTEM_LIBUNWIND=1" + "USE_SYSTEM_LIBUV=1" + (string-append "LIBUV=" + (assoc-ref %build-inputs "libuv") + "/lib/libuv.so") + (string-append "LIBUV_INC=" + (assoc-ref %build-inputs "libuv") + "/include") + "USE_SYSTEM_PATCHELF=1" + "USE_SYSTEM_PCRE=1" + "USE_SYSTEM_OPENLIBM=1" - "USE_SYSTEM_GMP=1" - "USE_SYSTEM_MPFR=1" - "USE_SYSTEM_ARPACK=1" - "USE_SYSTEM_LIBGIT2=1" - "USE_SYSTEM_ZLIB=1" - "USE_SYSTEM_OPENSPECFUN=1"))) + "USE_SYSTEM_GMP=1" + "USE_SYSTEM_MPFR=1" + "USE_SYSTEM_ARPACK=1" + "USE_SYSTEM_LIBGIT2=1" + "USE_SYSTEM_ZLIB=1" + "USE_SYSTEM_OPENSPECFUN=1"))) (inputs `(("llvm" ,llvm-julia) @@ -427,15 +427,15 @@ ;; Find dependency versions here: ;; https://raw.githubusercontent.com/JuliaLang/julia/77a2c1e245c85812dc1c7687540beedecc52758f/deps/Versions.make ("rmath" - ,(origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/JuliaLang/Rmath-julia") - (commit "v0.1"))) + ,(origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/JuliaLang/Rmath-julia") + (commit "v0.1"))) (file-name "rmath-julia-0.1-checkout") - (sha256 - (base32 - "1zkpy0cg5zivq40zbhbdgj9128fqzs2j94wkwih8nc6xaj3gp9p6")))) + (sha256 + (base32 + "1zkpy0cg5zivq40zbhbdgj9128fqzs2j94wkwih8nc6xaj3gp9p6")))) ("suitesparse" ,(origin (method url-fetch) @@ -453,26 +453,26 @@ (base32 "0wp6ld9vk11f4nnkn56627zmlv9k5vafi99qa3yyn1pgcd61zcfs")))) ("libwhich" - ,(let ((commit "81e9723c0273d78493dc8c8ed570f68d9ce7e89e")) + ,(let ((commit "81e9723c0273d78493dc8c8ed570f68d9ce7e89e")) (origin ;; Note: We use a /tarball URL, but that's because Julia's build ;; system checks the hash of that tarball; thus we can't use ;; 'git-fetch'. - (method url-fetch) - (uri (string-append - "https://api.github.com/repos/vtjnash/libwhich/tarball/" - commit)) + (method url-fetch) + (uri (string-append + "https://api.github.com/repos/vtjnash/libwhich/tarball/" + commit)) (file-name (string-append "libwhich-" (string-take commit 7) ".tar.gz")) - (sha256 - (base32 - "1p7zg31kpmpbmh1znrk1xrbd074agx13b9q4dcw8n2zrwwdlbz3b"))))) + (sha256 + (base32 + "1p7zg31kpmpbmh1znrk1xrbd074agx13b9q4dcw8n2zrwwdlbz3b"))))) ("dsfmt" ,(origin (method url-fetch) (uri (string-append - "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/" - "SFMT/dSFMT-src-2.2.3.tar.gz")) + "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/" + "SFMT/dSFMT-src-2.2.3.tar.gz")) (sha256 (base32 "03kaqbjbi6viz0n33dk5jlf6ayxqlsq4804n7kwkndiga9s4hd42")))))) @@ -483,9 +483,9 @@ ("pkg-config" ,pkg-config) ("python" ,python-2))) (native-search-paths - (list (search-path-specification - (variable "JULIA_LOAD_PATH") - (files (list "share/julia/packages/"))))) + (list (search-path-specification + (variable "JULIA_LOAD_PATH") + (files (list "share/julia/packages/"))))) ;; Julia is not officially released for ARM and MIPS. ;; See https://github.com/JuliaLang/julia/issues/10639 (supported-systems '("i686-linux" "x86_64-linux" "aarch64-linux")) |