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| -rw-r--r-- | gnu/packages/bioinformatics.scm | 7 |
1 files changed, 7 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a34b123264..206c193952 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10371,6 +10371,13 @@ once. This package provides tools to perform Drop-seq analyses.") `(#:parallel-tests? #f ; not supported #:phases (modify-phases %standard-phases + ;; See https://github.com/BIMSBbioinfo/pigx_rnaseq/issues/96 + (add-after 'unpack 'use-latest-salmon + (lambda _ + (substitute* "snakefile.py" + (("\"sa.bin\"") "\"pos.bin\"")) + (substitute* "tests/test_salmon/test_salmon_index.sh.in" + (("sa.bin") "pos.bin")))) ;; "test.sh" runs STAR, which requires excessive amounts of memory. (add-after 'unpack 'disable-resource-intensive-test (lambda _ |