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Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 9cb4ca36e8..807ddedc75 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -5947,3 +5947,31 @@ provides methods for retrieving enriched pathways.") model, amino acid change consequence, minor allele frequencies across human populations, splice site strength, conservation, etc.") (license license:artistic2.0))) + +(define-public r-genomegraphs + (package + (name "r-genomegraphs") + (version "1.44.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "GenomeGraphs" version)) + (sha256 + (base32 + "026skcn2cqchlzaqsnk11gb8d8aq1rz7lrnx4mmsba234mh4j7kd")))) + (properties `((upstream-name . "GenomeGraphs"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biomart" ,r-biomart))) + (home-page "https://bioconductor.org/packages/GenomeGraphs/") + (synopsis "Plotting genomic information from Ensembl") + (description + "Genomic data analyses requires integrated visualization of known genomic +information and new experimental data. GenomeGraphs uses the biomaRt package +to perform live annotation queries to Ensembl and translates this to e.g. +gene/transcript structures in viewports of the grid graphics package. This +results in genomic information plotted together with your data. Another +strength of GenomeGraphs is to plot different data types such as array CGH, +gene expression, sequencing and other data, together in one plot using the +same genome coordinate system.") + (license license:artistic2.0))) |