diff options
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 24 |
1 files changed, 10 insertions, 14 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 593b5b6202..dee8a975b9 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1477,31 +1477,27 @@ well as many of the command line options.") (define-public python2-bx-python (package (name "python2-bx-python") - (version "0.7.3") + (version "0.8.2") (source (origin (method url-fetch) (uri (pypi-uri "bx-python" version)) (sha256 (base32 - "15z2w3bvnc0n4qmb9bd6d8ylc2h2nj883x2w9iixf4x3vki9b22i")) - (modules '((guix build utils))) - (snippet - '(begin - (substitute* "setup.py" - ;; remove dependency on outdated "distribute" module - (("^from distribute_setup import use_setuptools") "") - (("^use_setuptools\\(\\)") "")) - #t)))) + "11kksg2rbzihpmcid823xvg42xi88m7sz58rzk29abybkxy0rszs")))) (build-system python-build-system) (arguments `(#:tests? #f ;tests fail because test data are not included #:python ,python-2)) - (inputs + (propagated-inputs `(("python-numpy" ,python2-numpy) - ("zlib" ,zlib))) + ("python-six" ,python2-six))) + (inputs + `(("zlib" ,zlib))) (native-inputs - `(("python-nose" ,python2-nose))) - (home-page "http://bitbucket.org/james_taylor/bx-python/") + `(("python-lzo" ,python2-lzo) + ("python-nose" ,python2-nose) + ("python-cython" ,python2-cython))) + (home-page "https://github.com/bxlab/bx-python") (synopsis "Tools for manipulating biological data") (description "bx-python provides tools for manipulating biological data, particularly |