diff options
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 19 |
1 files changed, 7 insertions, 12 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 9599e3096f..b619866ba3 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2936,18 +2936,15 @@ indexing scheme is called a @dfn{Hierarchical Graph FM index} (HGFM).") (define-public hmmer (package (name "hmmer") - (version "3.1b2") + (version "3.2.1") (source (origin (method url-fetch) (uri (string-append - "http://eddylab.org/software/hmmer" - (version-major version) "/" - version "/hmmer-" version ".tar.gz")) + "http://eddylab.org/software/hmmer/hmmer-" version ".tar.gz")) (sha256 (base32 - "0djmgc0pfli0jilfx8hql1axhwhqxqb8rxg2r5rg07aw73sfs5nx")) - (patches (search-patches "hmmer-remove-cpu-specificity.patch")))) + "171bivy6xhgjsz5nv53n81pc3frnwz29ylblawk2bv46szwjjqd5")))) (build-system gnu-build-system) (native-inputs `(("perl" ,perl))) (home-page "http://hmmer.org/") @@ -2957,12 +2954,10 @@ indexing scheme is called a @dfn{Hierarchical Graph FM index} (HGFM).") sequences, and for making protein sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs).") - (license (list license:gpl3+ - ;; The bundled library 'easel' is distributed - ;; under The Janelia Farm Software License. - (license:non-copyleft - "file://easel/LICENSE" - "See easel/LICENSE in the distribution."))))) + ;; hmmer uses non-portable SSE intrinsics so building fails on other + ;; platforms. + (supported-systems '("x86_64-linux" "i686-linux")) + (license license:bsd-3))) (define-public htseq (package |