diff options
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index df627fbe48..7175ecf41d 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1101,6 +1101,27 @@ RNA-Seq, the MISO model uses Bayesian inference to compute the probability that a read originated from a particular isoform.") (license license:gpl2))) +(define-public orfm + (package + (name "orfm") + (version "0.3.2") + (source (origin + (method url-fetch) + (uri (string-append + "https://github.com/wwood/OrfM/releases/download/v" + version "/orfm-" version ".tar.gz")) + (sha256 + (base32 + "00jqvlspj9662ni9r4n1snxfnwkzc02i46g5nk1kwjshi6v3vgg3")))) + (build-system gnu-build-system) + (inputs `(("zlib" ,zlib))) + (synopsis "Simple and not slow open reading frame (ORF) caller") + (description + "An ORF caller finds stretches of DNA that when translated are not +interrupted by stop codons. OrfM finds and prints these ORFs.") + (home-page "https://github.com/wwood/OrfM") + (license license:lgpl3+))) + (define-public python2-pbcore (package (name "python2-pbcore") |