diff options
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 15 |
1 files changed, 15 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5ab3bcc3ae..355b578623 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -258,6 +258,21 @@ intervals from multiple files in widely-used genomic file formats such as BAM, BED, GFF/GTF, VCF.") (license license:gpl2))) +;; Later releases of bedtools produce files with more columns than +;; what Ribotaper expects. +(define-public bedtools-2.18 + (package (inherit bedtools) + (name "bedtools") + (version "2.18.0") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/arq5x/bedtools2/" + "archive/v" version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "05vrnr8yp7swfagshzpgqmzk1blnwnq8pq5pckzi1m26w98d63vf")))))) + (define-public bioawk (package (name "bioawk") |