diff options
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 227 |
1 files changed, 126 insertions, 101 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8d7425e4c1..dbbf30c551 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -1026,27 +1026,26 @@ axis breaks of a ggplot.") (define-public r-ggdist (package (name "r-ggdist") - (version "3.3.1") + (version "3.3.2") (source (origin (method url-fetch) (uri (cran-uri "ggdist" version)) (sha256 - (base32 "0agr1l65s7vimdb88a7n3ahr6pp9ng5zf9mypdic26vhaaifh1b7")))) + (base32 "1wc3pqnf2r0324jm0vv1872smriv25h0lx0mni7qp93wrf8k0mpn")))) (properties `((upstream-name . "ggdist"))) (build-system r-build-system) (propagated-inputs (list r-cli r-distributional - r-dplyr r-ggplot2 r-glue + r-gtable r-numderiv r-quadprog r-rcpp r-rlang r-scales r-tibble - r-tidyselect r-vctrs r-withr)) (native-inputs (list r-knitr)) @@ -2710,13 +2709,13 @@ respecting the grammar of its graphics paradigm.") (define-public r-ggside (package (name "r-ggside") - (version "0.3.0") + (version "0.3.1") (source (origin (method url-fetch) (uri (cran-uri "ggside" version)) (sha256 (base32 - "0mx6j9wi54inklmyydcqm0ahbx0b6c6y4sfh2awqsbgwigc3056p")))) + "1r36hsnha9bqzfb3rhpj11zg307wzacnkn4i6hi627xrx4knj5cl")))) (properties `((upstream-name . "ggside"))) (build-system r-build-system) (propagated-inputs @@ -2977,13 +2976,13 @@ functions which can speed up workflow.") (define-public r-pagoda2 (package (name "r-pagoda2") - (version "1.0.11") + (version "1.0.12") (source (origin (method url-fetch) (uri (cran-uri "pagoda2" version)) (sha256 - (base32 "13x2l7hcvd6975921c5hba8hm2qijkslviszfizah8wxynhbayy1")))) + (base32 "1kck12ri52nwsrxhjs8ghjji3rv1dxxjy8bxn1kk1hbg30265fsw")))) (properties `((upstream-name . "pagoda2"))) (build-system r-build-system) (propagated-inputs @@ -3973,13 +3972,13 @@ scraping tasks, inspired by libraries like @code{BeautifulSoup}.") (define-public r-secretbase (package (name "r-secretbase") - (version "0.3.0") + (version "0.3.0.1") (source (origin (method url-fetch) (uri (cran-uri "secretbase" version)) (sha256 - (base32 "1wgbk16by9w933cff5ybb2sa0ndgj3sv9ahr2r1843vgqiyvx2xi")))) + (base32 "0mhfkkl35g10lgz4llm017f2jbgp7vmgi0g301r4agx1iqj5g51w")))) (properties `((upstream-name . "secretbase"))) (build-system r-build-system) (home-page "https://shikokuchuo.net/secretbase/") @@ -4704,13 +4703,13 @@ LaTeX.") (define-public r-curl (package (name "r-curl") - (version "5.2.0") + (version "5.2.1") (source (origin (method url-fetch) (uri (cran-uri "curl" version)) (sha256 (base32 - "12gldddkfkdwm6h0lb1pjrcpqc9kmqwfwz18wn9brilzbw8s9nxz")))) + "147smp4am6z23c3j21bd0zcjxsmhnkkssn4wrlpwl6xa1264syja")))) (properties `((upstream-name . "curl") (updater-extra-inputs . ("curl")))) @@ -5824,14 +5823,14 @@ contained in the navigation bar.") (define-public r-spelling (package (name "r-spelling") - (version "2.2.1") + (version "2.3.0") (source (origin (method url-fetch) (uri (cran-uri "spelling" version)) (sha256 (base32 - "0vr5mgw9grnsnzsc29al72p05z786hnd6b9c6wq0c0dabk5szm2g")))) + "0fxa0wpmmx7bal7xb4yy3134s2bskj98kwhqn25bqga3inzqdm6d")))) (properties `((upstream-name . "spelling"))) (build-system r-build-system) (propagated-inputs @@ -7642,13 +7641,13 @@ provides an interactive R manager and worker environment.") (define-public r-rmumps (package (name "r-rmumps") - (version "5.2.1-27") + (version "5.2.1-28") (source (origin (method url-fetch) (uri (cran-uri "rmumps" version)) (sha256 - (base32 "08zvmbhjgcrlgdhfn8ssajy8vnwcyaw90zgc0v1ncn95z310gpl3")))) + (base32 "1cq7zrq730lj1z5xirzk5fvvlvdq101ppg47n0z7c0v17rvs80n6")))) (properties `((upstream-name . "rmumps"))) (build-system r-build-system) (inputs (list zlib)) @@ -7996,14 +7995,14 @@ those for the gamma distribution in the @code{stats} package.") (define-public r-bdsmatrix (package (name "r-bdsmatrix") - (version "1.3-6") + (version "1.3-7") (source (origin (method url-fetch) (uri (cran-uri "bdsmatrix" version)) (sha256 (base32 - "1g300x11rv56f826mbv7mbb67a5xz3dv74hpjc18jh3q8gap3j7r")))) + "08krrd7454ixqv4nq55hgf3djp1pz1vl3ndslsrh2pkdq1d5wl63")))) (properties `((upstream-name . "bdsmatrix"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/bdsmatrix/") @@ -8462,17 +8461,22 @@ these progress updates.") (define-public r-lava (package (name "r-lava") - (version "1.7.3") + (version "1.8.0") (source (origin (method url-fetch) (uri (cran-uri "lava" version)) (sha256 (base32 - "023av1mz4hr1lqv8cpbx0j1y3c7ljyns35rm838c618b6pqps22f")))) + "0zz8hzmqd4qa14y52c8gw9hr6gn0d7srffrddxrmhb01rbp9dfcd")))) (build-system r-build-system) (propagated-inputs - (list r-future-apply r-numderiv r-progressr r-squarem r-survival)) + (list r-cli + r-future-apply + r-numderiv + r-progressr + r-squarem + r-survival)) (native-inputs (list r-knitr)) (home-page "https://github.com/kkholst/lava") @@ -9549,6 +9553,34 @@ imputations.") ;; Any of these two versions. (license (list license:gpl2 license:gpl3)))) +(define-public r-transformr + (package + (name "r-transformr") + (version "0.1.5") + (source + (origin + (method url-fetch) + (uri (cran-uri "transformr" version)) + (sha256 + (base32 "125y99wpgvp92qsg7934nzjqy6irjzaj21c0dcq7apqd2hqamfxw")))) + (properties `((upstream-name . "transformr"))) + (build-system r-build-system) + (propagated-inputs (list r-cpp11 + r-lpsolve + r-rlang + r-sf + r-tweenr + r-vctrs)) + (home-page "https://github.com/thomasp85/transformr") + (synopsis "Polygon and path transformations") + (description + "In order to smoothly animate the transformation of polygons and paths, +many aspects needs to be taken into account, such as differing number of +control points, changing center of rotation, etc. The transformr package +provides an extensive framework for manipulating the shapes of polygons and +paths and can be seen as the spatial brother to the tweenr package.") + (license license:expat))) + (define-public r-truncnorm (package (name "r-truncnorm") @@ -10739,13 +10771,13 @@ features: (define-public r-n2r (package (name "r-n2r") - (version "1.0.1") + (version "1.0.3") (source (origin (method url-fetch) (uri (cran-uri "N2R" version)) (sha256 - (base32 "12bv7xx6j6222qgpv6g61i68017fz0x6fjg9a9k5yhgw3zk05hpk")))) + (base32 "0bbxl0y36bmsxwi4rs4f6jwhf9bhag2rkvvzcg5669vgm2p4scjr")))) (properties `((upstream-name . "N2R"))) (build-system r-build-system) (propagated-inputs @@ -13408,14 +13440,14 @@ those searches and pull data into their R sessions.") (define-public r-renv (package (name "r-renv") - (version "1.0.4") + (version "1.0.5") (source (origin (method url-fetch) (uri (cran-uri "renv" version)) (sha256 (base32 - "0jfrkxslx1bw4b2akkp12bgvpfc58dh2vrm91hgb1xa5xydai7j6")))) + "07y1xqnx5jkgk0cqgf8c4p5vm3qy87zjl31zv6s0jssy3v7amq4p")))) (properties `((upstream-name . "renv"))) (build-system r-build-system) (native-inputs @@ -13677,14 +13709,14 @@ Sequence logos can easily be combined with other ggplot2 plots.") (define-public r-ggsci (package (name "r-ggsci") - (version "3.0.0") + (version "3.0.1") (source (origin (method url-fetch) (uri (cran-uri "ggsci" version)) (sha256 (base32 - "0ag1cj4ycl5xmll8mqmmikyvq94l8yx96pb8m2i853yp2rjk20c9")))) + "030rkjx64mlhy19d74p3blsi92nyjq9vbn33323dvm1rihb8avgi")))) (build-system r-build-system) (propagated-inputs (list r-ggplot2 r-scales)) @@ -13847,14 +13879,14 @@ clustering.") (define-public r-factominer (package (name "r-factominer") - (version "2.9") + (version "2.10") (source (origin (method url-fetch) (uri (cran-uri "FactoMineR" version)) (sha256 (base32 - "0c2j3xid85qffsdjwndqiwihclzw6k1nkbpzcc7whhd6k79rh9l8")))) + "1kjb0hk7zck8702inw9ayxrpbi8raq3rldxsq848lk15z3wg9r6w")))) (properties `((upstream-name . "FactoMineR"))) (build-system r-build-system) (propagated-inputs @@ -13989,21 +14021,21 @@ results to the user.") (define-public r-hdf5r (package (name "r-hdf5r") - (version "1.3.9") + (version "1.3.10") (source (origin (method url-fetch) (uri (cran-uri "hdf5r" version)) (sha256 (base32 - "1av3pafbfff4wanw9s1iqgwkcdmc5f8c8h3z0byqll9i661kz3pg")))) + "0khj94z6ls6dnc6fpxwf1w93mk6f3z2p39mbihf0lz52jc36wjcj")))) (build-system r-build-system) (inputs (list hdf5 zlib)) (propagated-inputs (list r-bit64 r-r6)) (native-inputs - (list r-knitr)) + (list pkg-config r-knitr)) (home-page "https://hhoeflin.github.io/hdf5r") (synopsis "Interface to the HDF5 binary data format") (description @@ -14540,13 +14572,13 @@ tidyverse workflow.") (define-public r-nodbi (package (name "r-nodbi") - (version "0.10.2") + (version "0.10.3") (source (origin (method url-fetch) (uri (cran-uri "nodbi" version)) (sha256 (base32 - "1pznlnln0p55qqwy22h9m79ddf3wgnx3vaxx2q39wvgqwj0kk1b0")))) + "17ghgp6sabj4dlmx3cdn9rrhci7050a73cd17fymjksgvy1jbwf6")))) (properties `((upstream-name . "nodbi"))) (build-system r-build-system) (propagated-inputs @@ -16173,13 +16205,13 @@ for the reconstruction of gene regulatory networks.") (define-public r-partr2 (package (name "r-partr2") - (version "0.9.1") + (version "0.9.2") (source (origin (method url-fetch) (uri (cran-uri "partR2" version)) (sha256 (base32 - "06ky0hhrq0mcsn9rwrzvwn0rrjj0l8rxs0hqp10668gdq5hjk8bn")))) + "09x8ykg90y4xq0sqm6zvx41sccgdbglmhpqm9sp3m74a87j4bjly")))) (properties `((upstream-name . "partR2"))) (build-system r-build-system) (propagated-inputs (list r-dplyr @@ -19295,14 +19327,14 @@ over-plotting in scatter plots with text.") (define-public r-colorramps (package (name "r-colorramps") - (version "2.3.1") + (version "2.3.2") (source (origin (method url-fetch) (uri (cran-uri "colorRamps" version)) (sha256 (base32 - "12jnkj50yh2hc5l7j56lrrrmn58akrj9dwj98vzf42iq4h42kwb1")))) + "0cq8l6ybhff2q2dj2i73b4cnw6v2c6ql24jbrkh0xrpc9wjsarxj")))) (properties `((upstream-name . "colorRamps"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/colorRamps") @@ -19985,14 +20017,14 @@ conditional reporting based on the current \"output level\".") (define-public r-tractor-base (package (name "r-tractor-base") - (version "3.3.5.1") + (version "3.4.2") (source (origin (method url-fetch) (uri (cran-uri "tractor.base" version)) (sha256 (base32 - "0fxbzbhpi6l55m14nmww8y3kdxgchzj4mw1yf4xkm2y6s68phvgc")))) + "12mp5x6c7c82a4z7p39cb478kwwf6lkrgbis6ak00yibsd3n6na3")))) (properties `((upstream-name . "tractor.base"))) (build-system r-build-system) (propagated-inputs @@ -20342,14 +20374,14 @@ library.") (define-public r-ontologyindex (package (name "r-ontologyindex") - (version "2.11") + (version "2.12") (source (origin (method url-fetch) (uri (cran-uri "ontologyIndex" version)) (sha256 (base32 - "17ndvqvb74b980gpb3hpg9bd68bb5f52k9s1i2kd1f9cdrdjvw97")))) + "0gf0z0vgc1f4f70f2zpwz9bka0gbgbj4w3fcxncv1b7lbrxddrd8")))) (properties `((upstream-name . "ontologyIndex"))) (build-system r-build-system) (native-inputs @@ -21634,14 +21666,14 @@ them in distributed compute environments.") (define-public r-parallelly (package (name "r-parallelly") - (version "1.37.0") + (version "1.37.1") (source (origin (method url-fetch) (uri (cran-uri "parallelly" version)) (sha256 (base32 - "19zrfiakg5xg51r9va4r976b4lnnsj5nsk6i6srxsl227q45xra1")))) + "189ngbh9i6mqmfn4z6446in7687ddlpdq6v5rj3hr8zqinqlwznz")))) (properties `((upstream-name . "parallelly"))) (build-system r-build-system) (home-page "https://github.com/HenrikBengtsson/parallelly") @@ -23366,14 +23398,14 @@ sampling.") (define-public r-deldir (package (name "r-deldir") - (version "2.0-2") + (version "2.0-4") (source (origin (method url-fetch) (uri (cran-uri "deldir" version)) (sha256 (base32 - "1qzfq47fs3pr0946m53z6cq93pbpkgwwhqkcdgfahxsq1izpigz9")))) + "0ls69b9yynvsiy6madvzafcb0jdvxw66sin7cinpnw63israq66l")))) (build-system r-build-system) (native-inputs (list gfortran)) (home-page "https://cran.r-project.org/web/packages/deldir") @@ -23942,13 +23974,13 @@ SELECT or UPDATE queries to an end-point.") (define-public r-bookdown (package (name "r-bookdown") - (version "0.37") + (version "0.38") (source (origin (method url-fetch) (uri (cran-uri "bookdown" version)) (sha256 (base32 - "18j8ylaq5wnw1c0lif9a002kbymv04pd0i43ahmqkskkv1b13hdk")) + "1i0z75sxvy3cb582siz544az6b9bs3vk2kyij9zx5jdpc1247fgd")) ;; TODO: there is one more file to replace: ;; inst/resources/gitbook/js/app.min.js (snippet @@ -24587,14 +24619,14 @@ packages with Rcpp.") (define-public r-tweenr (package (name "r-tweenr") - (version "2.0.2") + (version "2.0.3") (source (origin (method url-fetch) (uri (cran-uri "tweenr" version)) (sha256 (base32 - "1wqzcsxlz1isb1j0v5g6dgvd40q3q9qlahvgcgiq0j4d87nzvfv4")))) + "1glc7ks5yymcm4pi0fjpi1zh7m5d4cz7zy20pa3kfraxlh9fbazg")))) (build-system r-build-system) (arguments (list @@ -24797,28 +24829,27 @@ databases, including ENA, PDB or ChEMBL are also accessible.") (define-public r-ggraph (package (name "r-ggraph") - (version "2.1.0") + (version "2.2.0") (source (origin (method url-fetch) (uri (cran-uri "ggraph" version)) (sha256 (base32 - "07sw4h94dzbs44dcvvj80g8v8252k4iw8pkmzdrk4qagvhidnvv8")))) + "0zs02xyzvimk8hj1z465zxp1hlca3gfirdcwb3gqriwsmnfhg661")))) (build-system r-build-system) (propagated-inputs (list r-cli - r-digest + r-cpp11 r-dplyr r-ggforce r-ggplot2 r-ggrepel r-graphlayouts - r-gtable r-igraph r-lifecycle r-mass - r-rcpp + r-memoise r-rlang r-scales r-tidygraph @@ -26956,13 +26987,13 @@ guaranteeing well-connected communities.\" <arXiv:1810.08473>.") (define-public r-leidenalg (package (name "r-leidenalg") - (version "1.1.2") + (version "1.1.3") (source (origin (method url-fetch) (uri (cran-uri "leidenAlg" version)) (sha256 - (base32 "0wqay0rf28pgaf88bsvmrwgggzbma93rv9nqbydhjf1lc96ay1lz")))) + (base32 "0g4gs6rrz3wn97ag7wsfr6qa4zgb75i0k9jc1siii4pf6h689d1x")))) (properties `((upstream-name . "leidenAlg") (updater-extra-inputs . ("gmp")))) @@ -28072,14 +28103,14 @@ server-side.") (define-public r-sysfonts (package (name "r-sysfonts") - (version "0.8.8") + (version "0.8.9") (source (origin (method url-fetch) (uri (cran-uri "sysfonts" version)) (sha256 (base32 - "1fq5dn4l09sgrbznfz9cakf4vgc3761zwicvqaazh0s8mzbaicpn")))) + "124zcnw88xnlhx27qjm07mw59f98jiwspmm65v94k815lqs9qiaj")))) (properties `((upstream-name . "sysfonts"))) (build-system r-build-system) (inputs @@ -28118,14 +28149,14 @@ package.") (define-public r-showtext (package (name "r-showtext") - (version "0.9-6") + (version "0.9-7") (source (origin (method url-fetch) (uri (cran-uri "showtext" version)) (sha256 (base32 - "0c4cssqk4s27pxfyb7fii97zhy4awzapj7bx9zkbki4va75mkjhf")))) + "12a8j87ca39fd8vn9ixzfgkbffz8ajyslhsx2hqjry1gzbk864i5")))) (properties `((upstream-name . "showtext"))) (build-system r-build-system) (inputs @@ -29825,14 +29856,14 @@ variable observed over time.") (define-public r-fda (package (name "r-fda") - (version "6.1.4") + (version "6.1.7") (source (origin (method url-fetch) (uri (cran-uri "fda" version)) (sha256 (base32 - "0595887hv80blx9aq63qnmc9vr022p21zqhgp2wmdjvq1g68x0g2")))) + "00hiz15v31zs5l0bqdkim1fpfd3bjvssv77iczq0si724s4fqxiq")))) (properties `((upstream-name . "fda"))) (build-system r-build-system) (propagated-inputs @@ -31332,14 +31363,14 @@ Raftery, Appl.Statistics, 1989); it includes inference and basic methods.") (define-public r-forecast (package (name "r-forecast") - (version "8.21.1") + (version "8.22.0") (source (origin (method url-fetch) (uri (cran-uri "forecast" version)) (sha256 (base32 - "09w1vh96cf9wz071why5f4265cvvwqi2b3wb0khrjvkzgkiaq7l1")))) + "09s5fdyzc6f5l8dy7ynjmd6l5fk3wvz59q0kfv2fd9da5c1mqd8w")))) (properties `((upstream-name . "forecast"))) (build-system r-build-system) (propagated-inputs @@ -31925,14 +31956,14 @@ perform @dfn{exploratory mediation} (XMed).") (define-public r-stanheaders (package (name "r-stanheaders") - (version "2.32.5") + (version "2.32.6") (source (origin (method url-fetch) (uri (cran-uri "StanHeaders" version)) (sha256 (base32 - "0wqps6xy2xypxsg3p3grdiw67a0xla3vh9x9hcf2ln03yhgkn4jl")))) + "18p1rch5ipj0f4jdvr8mnlk8pg1l4njjj4cgbp7ni7kcngsn3049")))) (properties `((upstream-name . "StanHeaders"))) (build-system r-build-system) (inputs (list pandoc)) @@ -32329,14 +32360,14 @@ Latent regression models and plausible value imputation are also supported.") (define-public r-erm (package (name "r-erm") - (version "1.0-4") + (version "1.0-5") (source (origin (method url-fetch) (uri (cran-uri "eRm" version)) (sha256 (base32 - "0rp2lxkwkh09zmv101rzk7x1v1pmscp71qpf8f4chxp3idg6rpid")))) + "0bkivhiy02pibdcvb9z0i0yvc3wz3v33n6slhkkik61gcw1idmf0")))) (properties `((upstream-name . "eRm"))) (build-system r-build-system) (propagated-inputs @@ -33047,26 +33078,17 @@ statistics and p-values of the correlation coefficients.") (define-public r-hrbrthemes (package (name "r-hrbrthemes") - (version "0.8.0") + (version "0.8.7") (source (origin (method url-fetch) (uri (cran-uri "hrbrthemes" version)) (sha256 - (base32 "057h60b5p53dcyjyfwlgjc1ry968s9s64dw78p443w8717zk7zpc")))) + (base32 "0vwrwcx3yp5yi1fw45zb5b3rhhbhrmzkl935s5apvf9lwjz2wjas")))) (properties `((upstream-name . "hrbrthemes"))) (build-system r-build-system) (propagated-inputs - (list r-extrafont - r-gdtools - r-ggplot2 - r-htmltools - r-knitr - r-magrittr - r-rmarkdown - r-scales)) - (native-inputs - (list r-knitr)) + (list r-extrafont r-gdtools r-ggplot2 r-magrittr r-scales)) (home-page "https://github.com/hrbrmstr/hrbrthemes/") (synopsis "Additional themes, theme components and utilities for @code{ggplot2}") (description @@ -34669,14 +34691,14 @@ package.") (define-public r-spatstat-geom (package (name "r-spatstat-geom") - (version "3.2-8") + (version "3.2-9") (source (origin (method url-fetch) (uri (cran-uri "spatstat.geom" version)) (sha256 (base32 - "08q9k7065gpjmwja4xac9q8jv2hdkgmwvdncrnhdk9xkzc0z9mjb")))) + "05ymr4h6g5kp6kinm8qi6mcwi51d2rp671cm3hqgyrhk91k72cx7")))) (properties `((upstream-name . "spatstat.geom"))) (build-system r-build-system) (propagated-inputs @@ -34755,13 +34777,13 @@ for spatial data on a linear network.") (define-public r-spatstat-random (package (name "r-spatstat-random") - (version "3.2-2") + (version "3.2-3") (source (origin (method url-fetch) (uri (cran-uri "spatstat.random" version)) (sha256 - (base32 "01rsh7z9prsdrqlbc2761sf54w24z7jzj64ijfzy8l5ca56fxij8")))) + (base32 "19rl757lccr169fj00zmhb1a20bxw4kljzb81hbbr5xhj0za6lp0")))) (properties `((upstream-name . "spatstat.random"))) (build-system r-build-system) (propagated-inputs (list r-spatstat-data r-spatstat-geom r-spatstat-utils)) @@ -36870,13 +36892,13 @@ other R users.") (define-public r-seurat (package (name "r-seurat") - (version "5.0.1") + (version "5.0.2") (source (origin (method url-fetch) (uri (cran-uri "Seurat" version)) (sha256 (base32 - "038mqnavn3gxxx41yzq0q7gfnnx15dizryv8l374zwavpqsb84q7")))) + "1d49a9mhip81lvnkr8i4dznkmzyskdzrpi485w7yw2sr0qbyzg5c")))) (properties `((upstream-name . "Seurat"))) (build-system r-build-system) (propagated-inputs @@ -37053,11 +37075,11 @@ goal of enhancing interoperability between Seurat and Scanpy.") (license license:gpl3)))) (define-public r-seuratdata - (let ((commit "b59556b24d7d6728a5744c9c715dd5f7f32ed7a5") + (let ((commit "4dc08e022f51c324bc7bf785b1b5771d2742701d") (revision "1")) (package (name "r-seuratdata") - (version (git-version "0.2.1" revision commit)) + (version (git-version "0.2.2.9001" revision commit)) (source (origin (method git-fetch) @@ -37066,7 +37088,7 @@ goal of enhancing interoperability between Seurat and Scanpy.") (commit commit))) (file-name (git-file-name name version)) (sha256 - (base32 "1xfdmdmgn4r0z6w4cxa98ic6xk8i6qz054r215dvqbjs1vydsbf9")))) + (base32 "1wac1jqh42nbaikkd8v3apr1lwqcn1ppprfkwqfnqs6mvavgqavp")))) (properties `((upstream-name . "SeuratData"))) (build-system r-build-system) (arguments @@ -37076,8 +37098,7 @@ goal of enhancing interoperability between Seurat and Scanpy.") ;; the included list of packages. (add-after 'unpack 'set-HOME (lambda _ (setenv "HOME" "/tmp")))))) - (propagated-inputs - (list r-cli r-crayon r-rappdirs)) + (propagated-inputs (list r-cli r-crayon r-rappdirs r-seurat r-seuratobject)) (home-page "https://github.com/satijalab/seurat-data") (synopsis "Install and manage Seurat datasets") (description @@ -37609,13 +37630,13 @@ implemented as @code{R6} classes.") (define-public r-mlr3 (package (name "r-mlr3") - (version "0.17.2") + (version "0.18.0") (source (origin (method url-fetch) (uri (cran-uri "mlr3" version)) (sha256 (base32 - "0kcny3wxc7qc2538hxxdzs9bw4pq55s4abhlnpf1r13b2gkns323")))) + "0v83lwigpm227dqr8hz5x1khcjqf3q0glqvz812sckbcf74ibhdz")))) (build-system r-build-system) (propagated-inputs (list r-backports @@ -37674,14 +37695,14 @@ vector machines, and gradient boosting.") (define-public r-bbotk (package (name "r-bbotk") - (version "0.7.3") + (version "0.8.0") (source (origin (method url-fetch) (uri (cran-uri "bbotk" version)) (sha256 (base32 - "1ddr5w7n68d3imcrm0ipgk1waml8zj4szi566dmmiqvlpzpgdr3p")))) + "1ggfl1lhvjnnkxib4svqd82agrvjcg1101cbf4g2c0kzgzm1jaj6")))) (properties `((upstream-name . "bbotk"))) (build-system r-build-system) (propagated-inputs @@ -37704,13 +37725,13 @@ annealing.") (define-public r-mlr3tuning (package (name "r-mlr3tuning") - (version "0.19.2") + (version "0.20.0") (source (origin (method url-fetch) (uri (cran-uri "mlr3tuning" version)) (sha256 (base32 - "1d27m6yzwr7chpf19q6mwpj2fyz9vv8k6nbg8z9615hmbp96lan5")))) + "1y1cqfqdx9v0lfb4619y2hw6clhhjzi7hjwrpwzdpd7ymcx3dgi3")))) (build-system r-build-system) (propagated-inputs (list r-bbotk @@ -39190,14 +39211,14 @@ complex functions.") (define-public r-gganimate (package (name "r-gganimate") - (version "1.0.8") + (version "1.0.9") (source (origin (method url-fetch) (uri (cran-uri "gganimate" version)) (sha256 (base32 - "1jabs9qr0319w508kdsk5nmzfhl6nzykpp1by7l639yfvrfqcbd1")))) + "016nky797h4093qrpynq5rr1p7h4chpv1hyngpcs2csr1064rjmz")))) (properties `((upstream-name . "gganimate"))) (build-system r-build-system) (arguments @@ -39212,13 +39233,17 @@ complex functions.") ;; For video output. (list ffmpeg)) (propagated-inputs - (list r-ggplot2 + (list r-cli + r-ggplot2 r-glue + r-lifecycle r-progress r-rlang r-scales r-stringi + r-transformr r-tweenr + r-vctrs ;; For GIF/SVG output. gifski is faster, but depends on Rust. r-magick ;; For HTML output. |