diff options
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 233 |
1 files changed, 233 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 8144391729..f8177da013 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33,6 +33,8 @@ #:use-module (guix build-system r) #:use-module (gnu packages compression) #:use-module (gnu packages gcc) + #:use-module (gnu packages gnome) + #:use-module (gnu packages gtk) #:use-module (gnu packages machine-learning) #:use-module (gnu packages maths) #:use-module (gnu packages mpi) @@ -5564,3 +5566,234 @@ gf_density(), and so on, bring the formula interface to ggplot(). This captures and extends the excellent simplicity of the lattice-graphics formula interface, while providing the intuitive capabilities of @code{r-ggplot2}.") (license license:expat))) + +(define-public r-mosaicdata + (package + (name "r-mosaicdata") + (version "0.17.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "mosaicData" version)) + (sha256 + (base32 "04z0mdm52mykqsxsinhmsihn181zf6cw321gayk2rjp7lj7mwdq9")))) + (properties `((upstream-name . "mosaicData"))) + (build-system r-build-system) + (home-page "https://cran.r-project.org/web/packages/mosaicData/") + (synopsis "Data sets for project Mosaic") + (description + "This package provides data sets from project Mosaic @url{http://mosaic-web.org} +used to teach mathematics, statistics, computation and modeling.") + (license license:gpl2+))) + +(define-public r-mosaic + (package + (name "r-mosaic") + (version "1.4.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "mosaic" version)) + (sha256 + (base32 "10jbrg8kli00kfgbh2f67bymm5cnlancc9dplb1j7fl552yjddn2")))) + (build-system r-build-system) + (propagated-inputs + `(("r-broom" ,r-broom) + ("r-dplyr" ,r-dplyr) + ("r-ggdendro" ,r-ggdendro) + ("r-ggformula" ,r-ggformula) + ("r-ggplot2" ,r-ggplot2) + ("r-ggrepel" ,r-ggrepel) + ("r-glue" ,r-glue) + ("r-gridextra" ,r-gridextra) + ("r-lattice" ,r-lattice) + ("r-latticeextra" ,r-latticeextra) + ("r-lazyeval" ,r-lazyeval) + ("r-mass" ,r-mass) + ("r-matrix" ,r-matrix) + ("r-mosaiccore" ,r-mosaiccore) + ("r-mosaicdata" ,r-mosaicdata) + ("r-readr" ,r-readr) + ("r-tidyr" ,r-tidyr))) + (home-page "https://github.com/ProjectMOSAIC/mosaic/") + (synopsis "Mathematics, statistics, and computation teaching utilities") + (description + "This package contain data sets and utilities from +@url{http://mosaic-web.org, Project MOSAIC} used to teach mathematics, +statistics, computation and modeling. Project MOSAIC is a community of +educators working to tie together aspects of quantitative work that students +in science, technology, engineering and mathematics will need in their +professional lives, but which are usually taught in isolation, if at all.") + (license license:gpl2+))) + +(define-public r-abd + (package + (name "r-abd") + (version "0.2-8") + (source + (origin + (method url-fetch) + (uri (cran-uri "abd" version)) + (sha256 + (base32 "191gspqzdv573vaw624ri0f5cm6v4j524bjs74d4a1hn3kn6r9b7")))) + (build-system r-build-system) + (propagated-inputs + `(("r-lattice" ,r-lattice) + ("r-mosaic" ,r-mosaic) + ("r-nlme" ,r-nlme))) + (home-page "https://cran.r-project.org/web/packages/abd/") + (synopsis "Analysis of biological data") + (description + "The @code{r-abd} package contains data sets and sample code for the Analysis of +biological data by Michael Whitlock and Dolph Schluter.") + (license license:gpl2))) + +(define-public r-svgui + (package + (name "r-svgui") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "svGUI" version)) + (sha256 + (base32 "1r7ab0p4yr8q03gj02hmj7k1ghksgkg4nx750c0ajfs2q9y1dxfc")))) + (properties `((upstream-name . "svGUI"))) + (build-system r-build-system) + (home-page "https://github.com/SciViews/svGUI/") + (synopsis "Functions for managing GUI clients in R") + (description + "The SciViews @code{svGUI} package eases the management of Graphical User +Interfaces (GUI) in R. It is independent from any particular GUI widgets. It +centralizes info about GUI elements currently used, and it dispatches GUI +calls to the particular toolkits in use in function of the context.") + (license license:gpl2))) + +(define-public r-svdialogs + (package + (name "r-svdialogs") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "svDialogs" version)) + (sha256 + (base32 "0xqppydfawnwk84kb5qiybwbcmv38vn4imgz01mz2pnq4xb80p97")))) + (properties `((upstream-name . "svDialogs"))) + (build-system r-build-system) + (inputs + `(("yad" ,yad) + ("zenity" ,zenity))) + (propagated-inputs + `(("r-rstudioapi" ,r-rstudioapi) + ("r-svgui" ,r-svgui))) + (home-page "https://github.com/SciViews/svDialogs/") + (synopsis "Portable dialog boxes") + (description + "This package helps to construct standard dialog boxes for your GUI, including +message boxes, input boxes, list, file or directory selection, and others. In +case R cannot display GUI dialog boxes, a simpler command line version of these +interactive elements is also provided as a fallback solution.") + (license license:gpl2))) + +(define-public r-abe + (package + (name "r-abe") + (version "3.0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "abe" version)) + (sha256 + (base32 + "1f19h3xzzmjhvwc1rrb8z0rai3ip03y4gdi2gg9bfr5sg2nfklk6")))) + (build-system r-build-system) + (home-page "https://cran.r-project.org/web/packages/abe/") + (synopsis "Augmented backward elimination") + (description + "This package performs augmented backward elimination and checks the +stability of the obtained model. Augmented backward elimination combines +significance or information based criteria with the change in estimate to +either select the optimal model for prediction purposes or to serve as a tool +to obtain a practically sound, highly interpretable model.") + (license license:gpl2+))) + +(define-public r-abf2 + (package + (name "r-abf2") + (version "0.7-1") + (source + (origin + (method url-fetch) + (uri (cran-uri "abf2" version)) + (sha256 + (base32 "0d65mc1w4pbiv7xaqzdlw1bfsxf25587rv597hh41vs0j0zlfpxx")))) + (build-system r-build-system) + (home-page "https://cran.r-project.org/web/packages/abf2/") + (synopsis "Load gap-free axon @code{r-abf2} files") + (description + "This package loads electrophysiology data from ABF2 files, as created by +Axon Instruments/Molecular Devices software. Only files recorded in gap-free +mode are currently supported.") + (license license:artistic2.0))) + +(define-public r-abhgenotyper + (package + (name "r-abhgenotyper") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "ABHgenotypeR" version)) + (sha256 + (base32 "08cpmnaaxsm5c5bjifnfxdlvg5inrf13biqpcl2yq5zpqjmiki0l")))) + (properties `((upstream-name . "ABHgenotypeR"))) + (build-system r-build-system) + (propagated-inputs + `(("r-ggplot2" ,r-ggplot2) + ("r-reshape2" ,r-reshape2))) + (home-page "https://github.com/StefanReuscher/ABHgenotypeR/") + (synopsis "Visualize and manipulate ABH genotypes") + (description + "The @code{r-abhgenotyper} package provides simple imputation, +error-correction and plotting capacities for genotype data. The package is +supposed to serve as an intermediate but independent analysis tool between the +TASSEL GBS pipeline and the @code{r-qtl} package. It provides functionalities +not found in either TASSEL or @code{r-qtl} in addition to visualization of +genotypes as \"graphical genotypes\".") + (license license:gpl3))) + +(define-public r-abjutils + (package + (name "r-abjutils") + (version "0.2.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "abjutils" version)) + (sha256 + (base32 "0qrsc4if7aif73qp95lw6b5986c2r0jn7m39123zij8k15vc935b")))) + (build-system r-build-system) + (propagated-inputs + `(("r-devtools" ,r-devtools) + ("r-dplyr" ,r-dplyr) + ("r-glue" ,r-glue) + ("r-httr" ,r-httr) + ("r-magrittr" ,r-magrittr) + ("r-plyr" ,r-plyr) + ("r-progress" ,r-progress) + ("r-purrr" ,r-purrr) + ("r-rstudioapi" ,r-rstudioapi) + ("r-scales" ,r-scales) + ("r-stringi" ,r-stringi) + ("r-stringr" ,r-stringr) + ("r-tibble" ,r-tibble) + ("r-tidyr" ,r-tidyr))) + (home-page "https://github.com/abjur/abjutils/") + (synopsis "Collection of tools for jurimetrical analysis") + (description + "This package implements general purpose tools, such as functions for +sampling and basic manipulation of Brazilian lawsuits identification number. +It also implements functions for text cleaning, such as accentuation +removal.") + (license license:expat))) |