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Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 5c530a6a36..4b4d1996b7 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -16860,3 +16860,29 @@ Functions for performing cross validation are also supplied along with basic prediction and plotting functions. @dfn{Sparse zero variance discriminant} (SZVD) analysis is also included in the package.") (license license:gpl2+))) + +(define-public r-ace2fastq + (package + (name "r-ace2fastq") + (version "0.6.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "ace2fastq" version)) + (sha256 + (base32 + "09kk3yyqnr2xp820g0p3aai9a21figigjr9lxkr3zjq2d8gzwfic")))) + (properties `((upstream-name . "ace2fastq"))) + (build-system r-build-system) + (propagated-inputs + `(("r-stringr" ,r-stringr))) + (home-page "https://github.com/c5sire/ace2fastq") + (synopsis "ACE file to FASTQ converter") + (description + "The ACE file format is used in genomics to store contigs from sequencing +machines. This tools converts it into FASTQ format. Both formats contain the +sequence characters and their corresponding quality information. Unlike the +FASTQ file, the ACE file stores the quality values numerically. The +conversion algorithm uses the standard Sanger formula. The package +facilitates insertion into pipelines, and content inspection.") + (license license:gpl3))) |