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Diffstat (limited to 'gnu/packages/image-processing.scm')
| -rw-r--r-- | gnu/packages/image-processing.scm | 277 |
1 files changed, 277 insertions, 0 deletions
diff --git a/gnu/packages/image-processing.scm b/gnu/packages/image-processing.scm index ab796d7719..85acc3f5b5 100644 --- a/gnu/packages/image-processing.scm +++ b/gnu/packages/image-processing.scm @@ -21,6 +21,7 @@ ;;; Copyright © 2021 Ivan Gankevich <i.gankevich@spbu.ru> ;;; Copyright © 2022 Maxim Cournoyer <maxim.cournoyer@gmail.com> ;;; Copyright © 2022 Tomasz Jeneralczyk <tj@schwi.pl> +;;; Copyright © 2022 Paul A. Patience <paul@apatience.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -60,6 +61,8 @@ #:use-module (gnu packages documentation) #:use-module (gnu packages flex) #:use-module (gnu packages fontutils) + #:use-module (gnu packages game-development) + #:use-module (gnu packages gcc) #:use-module (gnu packages geo) #:use-module (gnu packages ghostscript) #:use-module (gnu packages gimp) @@ -75,16 +78,21 @@ #:use-module (gnu packages imagemagick) #:use-module (gnu packages linux) #:use-module (gnu packages maths) + #:use-module (gnu packages mpi) #:use-module (gnu packages pdf) #:use-module (gnu packages perl) #:use-module (gnu packages photo) #:use-module (gnu packages pkg-config) + #:use-module (gnu packages pretty-print) #:use-module (gnu packages protobuf) #:use-module (gnu packages python) #:use-module (gnu packages python-check) + #:use-module (gnu packages python-science) #:use-module (gnu packages python-xyz) #:use-module (gnu packages qt) + #:use-module (gnu packages sdl) #:use-module (gnu packages serialization) + #:use-module (gnu packages sphinx) #:use-module (gnu packages sqlite) #:use-module (gnu packages tbb) #:use-module (gnu packages textutils) @@ -958,6 +966,275 @@ and quantitative techniques. The data exploration can be done interactively in 3D or programmatically using ParaView’s batch processing capabilities.") (license license:bsd-3))) +(define-public paraview + (package + (name "paraview") + (version "5.11.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://gitlab.kitware.com/paraview/paraview.git") + (commit (string-append "v" version)) + (recursive? #t))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0qifzsbgg8f7zvg5a4934nql6nv5b6sm1f59bylyc6v5bqd0myas")) + (modules '((guix build utils))) + (snippet + ;; TODO: Also remove unused bundled libraries and plugins? + #~(begin + ;; Remove bundled ParaView libraries which are available in Guix + ;; or undesired. + (for-each (lambda (dir) + (delete-file-recursively + (string-append "ThirdParty/" dir "/vtk" + (string-downcase dir)))) + '(;;"CosmoHaloFinder" + ;;"IceT" + "NvPipe" ; Don't want NvPipe support + ;;"QtTesting" + ;;"cinema" + ;;"cinemasci" + "protobuf")) + ;; Remove undesired ParaView plugins. + (delete-file-recursively "Plugins/pvNVIDIAIndeX") + ;; Remove bundled VTK libraries which are available in Guix. + (for-each (lambda (dir) + (delete-file-recursively + (string-append "VTK/ThirdParty/" dir "/vtk" dir))) + '(;;"cgns" + "cli11" + ;;"diy2" + "doubleconversion" + "eigen" + ;;"exodusII" + "expat" + ;;"exprtk" + ;;"fides" + "fmt" + "freetype" + "gl2ps" + "glew" + ;;"h5part" + "hdf5" + ;;"ioss" + "jpeg" + "jsoncpp" + ;;"kissfft" + ;;"libharu" ; Requires some PRs applied to 2.3.0 + "libproj" + "libxml2" + ;;"loguru" + "lz4" + "lzma" + "mpi4py" + "netcdf" + ;;"nlohmannjson" ; ParFlow build fails even with bundled + "ogg" + ;;"pegtl" + "png" + "pugixml" + "sqlite" + "theora" + "tiff" + "utf8" + ;;"verdict" + ;;"vpic" + ;;"vtkm" + ;;"xdmf2" + ;;"xdmf3" + ;;"zfp" + "zlib")))))) + (build-system qt-build-system) + (arguments + (list + #:build-type "Release" ; 542 MiB in release mode + #:tests? #f ; Downloads test data + #:configure-flags + #~(let ((doc (string-append #$output "/share/doc/" #$name "-" #$version))) + (list + (string-append "-DCMAKE_INSTALL_DOCDIR=" doc) ; For paraview.qch + + ;; ParaView build options + "-DPARAVIEW_BUILD_DEVELOPER_DOCUMENTATION=ON" + (string-append "-DPARAVIEW_GENERATED_DOCUMENTATION_OUTPUT_DIRECTORY=" doc) + + ;; ParaView capability options + ;;"-DPARAVIEW_USE_EXTERNAL_VTK=ON" ; Unsupported by ParaView + "-DPARAVIEW_USE_MPI=ON" + "-DPARAVIEW_USE_PYTHON=ON" + "-DPARAVIEW_USE_QTWEBENGINE=ON" + + ;; ParaView features + ;; + ;; Enable those that are disabled by default. + ;; Commented means the dependencies are missing from Guix + ;; (or are otherwise described). + ;;"-DPARAVIEW_ENABLE_ADIOS2=ON" + ;;"-DPARAVIEW_ENABLE_COSMOTOOLS=ON" + ;;"-DPARAVIEW_ENABLE_CATALYST=ON" + "-DPARAVIEW_ENABLE_FFMPEG=ON" + ;;"-DPARAVIEW_ENABLE_FIDES=ON" + "-DPARAVIEW_ENABLE_GDAL=ON" + ;;"-DPARAVIEW_ENABLE_LAS=ON" + ;;"-DPARAVIEW_ENABLE_LOOKINGGLASS=ON" ; Downloads dependency + ;;"-DPARAVIEW_ENABLE_MOMENTINVARIANTS=ON" ; Downloads dependency + "-DPARAVIEW_ENABLE_MOTIONFX=ON" + ;;"-DPARAVIEW_ENABLE_OPENTURNS=ON" + ;;"-DPARAVIEW_ENABLE_OPENVDB=ON" ; Dependency not found + ;;"-DPARAVIEW_ENABLE_PDAL=ON" + ;;"-DPARAVIEW_ENABLE_RAYTRACING=ON" + "-DPARAVIEW_ENABLE_VISITBRIDGE=ON" + "-DPARAVIEW_ENABLE_XDMF3=ON" + + ;; ParaView miscellaneous options + ;; + ;; Without -DPARAVIEW_DATA_EXCLUDE_FROM_ALL=OFF, test data is + ;; downloaded even with tests disabled. + "-DPARAVIEW_VERSIONED_INSTALL=OFF" + "-DPARAVIEW_DATA_EXCLUDE_FROM_ALL=OFF" + + ;; ParaView plugins + ;; + ;; Enable those that are disabled by default. + ;; Commented means the dependencies are missing from Guix + ;; (or are otherwise described). + ;;"-DPARAVIEW_PLUGIN_ENABLE_AdiosReaderPixie=ON" + ;;"-DPARAVIEW_PLUGIN_ENABLE_AdiosReaderStaging=ON" + "-DPARAVIEW_PLUGIN_ENABLE_CAVEInteraction=ON" + ;;"-DPARAVIEW_PLUGIN_ENABLE_CDIReader=ON" + "-DPARAVIEW_PLUGIN_ENABLE_GeographicalMap=ON" + "-DPARAVIEW_PLUGIN_ENABLE_GmshIO=ON" + "-DPARAVIEW_PLUGIN_ENABLE_InSituExodus=ON" + ;;"-DPARAVIEW_PLUGIN_ENABLE_LookingGlass=ON" + "-DPARAVIEW_PLUGIN_ENABLE_NetCDFTimeAnnotationPlugin=ON" + ;;"-DPARAVIEW_PLUGIN_ENABLE_ParFlow=ON" ; Build fails + ;;"-DPARAVIEW_PLUGIN_ENABLE_PythonQtPlugin=ON" + "-DPARAVIEW_PLUGIN_ENABLE_SpaceMouseInteractor=ON" + ;;"-DPARAVIEW_PLUGIN_ENABLE_VDFReaderPlugin=ON" + ;;"-DPARAVIEW_PLUGIN_ENABLE_XRInterface=ON" ; Build fails + ;;"-DPARAVIEW_PLUGIN_ENABLE_zSpace=ON" + + ;; VTK options + "-DVTK_SMP_IMPLEMENTATION_TYPE=TBB" + "-DVTKm_ENABLE_MPI=ON" + + ;; External libraries for ParaView and VTK + "-DVTK_MODULE_USE_EXTERNAL_ParaView_protobuf=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_cli11=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_doubleconversion=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_eigen=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_expat=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_fmt=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_freetype=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_gl2ps=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_glew=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_hdf5=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_jpeg=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_jsoncpp=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_libproj=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_libxml2=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_lz4=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_lzma=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_mpi4py=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_netcdf=ON" + ;;"-DVTK_MODULE_USE_EXTERNAL_VTK_nlohmannjson=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_ogg=ON" + ;;"-DVTK_MODULE_USE_EXTERNAL_VTK_pegtl=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_png=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_pugixml=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_sqlite=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_theora=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_tiff=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_utf8=ON" + "-DVTK_MODULE_USE_EXTERNAL_VTK_zlib=ON")) + #:phases + #~(modify-phases %standard-phases + (add-after 'set-paths 'hide-gfortran + (lambda _ + (setenv "CPLUS_INCLUDE_PATH" + (string-join + (delete (string-append #$(this-package-native-input "gfortran") + "/include/c++") + (string-split (getenv "CPLUS_INCLUDE_PATH") #\:)) + ":")))) + (replace 'install-license-files + (lambda _ + (let ((src (string-append #$output "/share/licenses/ParaView")) + (dst (string-append #$output "/share/doc/" + #$name "-" #$version "/licenses"))) + (copy-recursively src dst) + (delete-file-recursively (dirname src)))))))) + (native-inputs + (list gfortran + ;; For the documentation + doxygen + graphviz + perl + python-sphinx)) + (inputs + (list boost + cli11 + curl + double-conversion + eigen + expat + ffmpeg + fmt + freetype + gdal + gl2ps + glew + gmsh + hdf5 + ;;json-modern-cxx ;For ParFlow; build fails + jsoncpp + libjpeg-turbo + libogg + libpng + libtheora + libtiff + libxcursor + libxml2 + libxt + lz4 + lzip + mesa + netcdf + openmpi + ;;openvdb ;For OpenVDB; dependency not found + ;;openvr ;For XRInterface; build fails + ;;pegtl ;For VTK; build fails + proj + protobuf + pugixml + python-cftime + python-matplotlib + python-mpi4py + python-numpy + python-wrapper + qtbase-5 + qtdeclarative-5 + qtmultimedia-5 + qtsvg-5 + qttools-5 + qtwebchannel-5 + qtwebengine-5 + qtx11extras + qtxmlpatterns + sdl2 + sqlite + tbb + utfcpp + zlib)) + (home-page "https://www.paraview.org/") + (synopsis "VTK-based, parallel data analyzer and visualizer") + (description "ParaView is a VTK-based, parallel data analyzer and +visualizer which allows exploring data interactively in 3D or +programmatically.") + (license license:bsd-3))) + (define-public vxl (package (name "vxl") |