diff options
Diffstat (limited to 'gnu/packages/machine-learning.scm')
| -rw-r--r-- | gnu/packages/machine-learning.scm | 115 |
1 files changed, 112 insertions, 3 deletions
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index aac5b81a06..2f7e1ac5d9 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2016, 2020, 2021 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016, 2017, 2020 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com> @@ -2907,7 +2907,7 @@ TensorFlow.js, PyTorch, and MediaPipe.") (define-public python-pytorch (package (name "python-pytorch") - (version "1.10.0") + (version "1.10.2") (source (origin (method git-fetch) (uri (git-reference @@ -2917,7 +2917,7 @@ TensorFlow.js, PyTorch, and MediaPipe.") (file-name (git-file-name name version)) (sha256 (base32 - "1ihsjw48qqbikmhxxn17bcdvk2zsjabvkq61q6pvj7dzvrdpkb60")) + "15fi3nr7fx2zc9j2xf0jq627zfmnvs8hijyifg9769arm8kfijs1")) (patches (search-patches "python-pytorch-system-libraries.patch" "python-pytorch-runpath.patch")) (modules '((guix build utils))) @@ -3034,6 +3034,53 @@ PyTorch when needed. Note: currently this package does not provide GPU support.") (license license:bsd-3))) +(define-public python-pytorch-for-r-torch + (package + (inherit python-pytorch) + (name "python-pytorch") + (version "1.9.0") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/pytorch/pytorch") + (commit (string-append "v" version)) + (recursive? #t))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0cznsh68hwk5761gv7iijb4g6jgjpvs3bbixwpzzmkbkbn2q96c1")) + (patches (search-patches "python-pytorch-1.9.0-system-libraries.patch" + "python-pytorch-runpath.patch")) + (modules '((guix build utils))) + (snippet + '(begin + ;; XXX: Let's be clear: this package is a bundling fest. We + ;; delete as much as we can, but there's still a lot left. + (for-each (lambda (directory) + (delete-file-recursively + (string-append "third_party/" directory))) + '("benchmark" "cpuinfo" "eigen" + + ;; FIXME: QNNPACK (of which XNNPACK is a fork) + ;; needs these. + ;; "FP16" "FXdiv" "gemmlowp" "psimd" + + "gloo" "googletest" "ios-cmake" "NNPACK" + "onnx" "protobuf" "pthreadpool" + "pybind11" "python-enum" "python-peachpy" + "python-six" "tbb" "XNNPACK" "zstd")) + + ;; Adjust references to the onnx-optimizer headers. + (substitute* "caffe2/onnx/backend.cc" + (("onnx/optimizer/") + "onnxoptimizer/")))))) + (arguments + (substitute-keyword-arguments (package-arguments python-pytorch) + ((#:phases phases '%standard-phases) + `(modify-phases ,phases + ;; No module named 'onnx.optimizer' + (delete 'sanity-check))))))) + (define-public python-hmmlearn (package (name "python-hmmlearn") @@ -3066,3 +3113,65 @@ Note: currently this package does not provide GPU support.") "Hmmlearn is a set of algorithms for unsupervised learning and inference of Hidden Markov Models.") (license license:bsd-3))) + +;; Keep this in sync with the r-torch package. +(define-public liblantern + (package + (name "liblantern") + (version "0.6.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/mlverse/torch") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1gabwic46m4m7qld1yi4brw05n9jx58ri3y0pi6jf9jndfi1qnfp")))) + (build-system cmake-build-system) + (arguments + (list + #:tests? #false ;no test target + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'chdir + (lambda _ (chdir "lantern"))) + (add-after 'chdir 'do-not-download-binaries + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "CMakeLists.txt" + (("find_package\\(Torch.*") "set(TORCH_CXX_FLAGS \"-ltorch\")\n") + (("retrieve_lib\\(.*") "")) + (setenv "LIBRARY_PATH" + (string-append + (search-input-directory + inputs "/lib/python3.9/site-packages/torch/lib") + ":" (or (getenv "LIBRARY_PATH") ""))) + (setenv "CPLUS_INCLUDE_PATH" + (string-append + (search-input-directory + inputs "lib/python3.9/site-packages/torch/include/torch/csrc/api/include/") + ":" + (search-input-directory + inputs "lib/python3.9/site-packages/torch/include/") + ":" + (or (getenv "CPLUS_INCLUDE_PATH") ""))) + (setenv "C_INCLUDE_PATH" + (string-append + (search-input-directory + inputs "lib/python3.9/site-packages/torch/include/") + ":" + (or (getenv "C_INCLUDE_PATH") ""))))) + (replace 'install + (lambda _ + (install-file + "../build/liblantern.so" + (string-append #$output "/lib")) + (copy-recursively + "../lantern/include" + (string-append #$output "/include"))))))) + (inputs (list python-pytorch-for-r-torch)) + (home-page "https://github.com/mlverse/torch/") + (synopsis "C API to libtorch") + (description + "Lantern provides a C API to the libtorch machine learning library.") + (license license:expat))) |