diff options
Diffstat (limited to 'gnu/packages/maths.scm')
| -rw-r--r-- | gnu/packages/maths.scm | 40 |
1 files changed, 30 insertions, 10 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 96a1ecb043..9fb02b7385 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -3707,7 +3707,13 @@ set.") `(("doc++" ,doc++) ("netpbm" ,netpbm) ("perl" ,perl) ;needed to run 'ppmquant' during tests - ("texlive" ,texlive) ;full package required for fonts + ("texlive" ,(texlive-union (list texlive-generic-xypic + texlive-fonts-xypic + texlive-latex-hyperref + texlive-latex-oberdiek + texlive-generic-ifxetex + texlive-latex-url + texlive-bibtex))) ("ghostscript" ,ghostscript))) (inputs `(("blas" ,openblas) @@ -3724,6 +3730,12 @@ set.") "--with-blas") #:phases (modify-phases %standard-phases + (add-before 'build 'set-HOME + (lambda _ + ;; FIXME: texlive-union does not find the built + ;; metafonts, so it tries to generate them in HOME. + (setenv "HOME" "/tmp") + #t)) (add-before 'configure 'chdir-src (lambda _ (chdir "src"))) (replace 'configure @@ -3738,7 +3750,7 @@ set.") configure-flags))))))) (add-after 'build 'build-docs (lambda _ - (zero? (system* "make" "-Cdocs" "pdf" "html")))) + (invoke "make" "-Cdocs" "pdf" "html"))) (replace 'check (lambda _ (setenv "LD_LIBRARY_PATH" (string-append (getcwd) "/hypre/lib")) @@ -3959,6 +3971,7 @@ as equations, scalars, vectors, and matrices.") (method git-fetch) (uri (git-reference (url home-page) (commit (string-append "z3-" version)))) + (file-name (git-file-name name version)) (sha256 (base32 "1vr57bwx40sd5riijyrhy70i2wnv9xrdihf6y5zdz56yq88rl48f")))) @@ -3972,6 +3985,12 @@ as equations, scalars, vectors, and matrices.") "/lib/python2.7/site-packages")) #:phases (modify-phases %standard-phases + (add-after 'unpack 'fix-compatability + ;; Versions after 4.8.3 have immintrin.h IFDEFed for Windows only. + (lambda _ + (substitute* "src/util/mpz.cpp" + (("#include <immintrin.h>") "")) + #t)) (add-before 'configure 'bootstrap (lambda _ (zero? @@ -4055,13 +4074,14 @@ exclusion algorithms are typical examples of such systems.") (name "elemental") (version "0.87.7") (source (origin - (method url-fetch) - (uri (string-append "https://github.com/elemental/Elemental/" - "archive/v" version ".tar.gz")) - (file-name (string-append name "-" version ".tar.gz")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/elemental/Elemental.git") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) (sha256 (base32 - "1nfp82w22pi8x8fg9sc37z8kf84dqi1dhxp8bbk7571y4aygvv3v")))) + "1687xpjjzig27y2pnqv7hv09smpijyfdpz7qjgmcxf4shfajlfkc")))) (build-system cmake-build-system) (home-page "http://libelemental.org") (native-inputs @@ -4085,8 +4105,8 @@ exclusion algorithms are typical examples of such systems.") "-DCMAKE_INSTALL_LIBDIR=lib" "-DGFORTRAN_LIB=gfortran") #:phases (modify-phases %standard-phases - (add-before 'check 'mpi-setup - ,%openmpi-setup) + (add-before 'check 'mpi-setup + ,%openmpi-setup) (add-before 'check 'setup-tests (lambda _ ;; Parallelism is done at the MPI layer. @@ -4097,7 +4117,7 @@ exclusion algorithms are typical examples of such systems.") ;; Tests are installed, with no easy configuration ;; switch to prevent this, so delete them. (delete-file-recursively - (string-append (assoc-ref outputs "out") "/bin")) + (string-append (assoc-ref outputs "out") "/bin")) #t))))) (synopsis "Dense and sparse-direct linear algebra and optimization") (description "Elemental is a modern C++ library for distributed-memory |