diff options
Diffstat (limited to 'gnu/packages/maths.scm')
| -rw-r--r-- | gnu/packages/maths.scm | 88 |
1 files changed, 43 insertions, 45 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 758f0a5c32..1f96ed907e 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -330,8 +330,8 @@ programming language.") (let* ((out (assoc-ref outputs "out")) (bin (string-append out "/bin"))) (wrap-program (string-append bin "/units_cur") - `("PYTHONPATH" ":" prefix - ,(search-path-as-string->list (getenv "PYTHONPATH")))) + `("GUIX_PYTHONPATH" ":" prefix + ,(search-path-as-string->list (getenv "GUIX_PYTHONPATH")))) #t)))))) (synopsis "Conversion between thousands of scales") (description @@ -480,35 +480,38 @@ precision floating point numbers.") (build-system gnu-build-system) (arguments (let ((system (%current-system))) - (cond - ((or (string-prefix? "aarch64" system) - (string-prefix? "powerpc" system)) - ;; Some sparse matrix tests are failing on AArch64 and PowerPC: - ;; https://lists.gnu.org/archive/html/bug-gsl/2020-04/msg00001.html - '(#:phases (modify-phases %standard-phases - (add-before 'check 'disable-failing-tests - (lambda _ - (substitute* "spmatrix/test.c" - ((".*test_complex.*") "\n")) - #t))))) - ((string-prefix? "i686" system) - ;; There are rounding issues with these tests on i686: - ;; https://lists.gnu.org/archive/html/bug-gsl/2016-10/msg00000.html - ;; https://lists.gnu.org/archive/html/bug-gsl/2020-04/msg00000.html - '(#:phases (modify-phases %standard-phases - (add-before 'check 'disable-failing-tests - (lambda _ - (substitute* "linalg/test.c" - ((".*gsl_test\\(test_LU_decomp.*") "\n") - ((".*gsl_test\\(test_LUc_decomp.*") "\n") - ((".*gsl_test\\(test_cholesky_decomp.*") "\n") - ((".*gsl_test\\(test_COD_lssolve2.*") "\n")) - (substitute* "spmatrix/test.c" - ((".*test_all.*") "\n") - ((".*test_float.*") "\n") - ((".*test_complex.*") "\n")) - #t))))) - (else '())))) + `(#:configure-flags (list "--disable-static") ;halves package size + #:phases + (modify-phases %standard-phases + ,@(cond + ((or (string-prefix? "aarch64" system) + (string-prefix? "powerpc" system)) + ;; Some sparse matrix tests are failing on AArch64 and PowerPC: + ;; https://lists.gnu.org/archive/html/bug-gsl/2020-04/msg00001.html + '((add-before 'check 'disable-failing-tests + (lambda _ + (substitute* "spmatrix/test.c" + ((".*test_complex.*") "\n")) + #t)))) + + ((string-prefix? "i686" system) + ;; There are rounding issues with these tests on i686: + ;; https://lists.gnu.org/archive/html/bug-gsl/2016-10/msg00000.html + ;; https://lists.gnu.org/archive/html/bug-gsl/2020-04/msg00000.html + '((add-before 'check 'disable-failing-tests + (lambda _ + (substitute* "linalg/test.c" + ((".*gsl_test\\(test_LU_decomp.*") "\n") + ((".*gsl_test\\(test_LUc_decomp.*") "\n") + ((".*gsl_test\\(test_cholesky_decomp.*") "\n") + ((".*gsl_test\\(test_COD_lssolve2.*") "\n")) + (substitute* "spmatrix/test.c" + ((".*test_all.*") "\n") + ((".*test_float.*") "\n") + ((".*test_complex.*") "\n")) + #t)))) + + (else '())))))) (home-page "https://www.gnu.org/software/gsl/") (synopsis "Numerical library for C and C++") (description @@ -2030,7 +2033,7 @@ script files.") ,@(package-inputs octave-cli))) (native-inputs `(("qttools" , qttools) ;for lrelease - ("texlive" ,(texlive-union (list texlive-epsf))) ; for texi2dvi + ("texlive" ,(texlive-updmap.cfg (list texlive-epsf))) ; for texi2dvi ,@(package-native-inputs octave-cli))) (arguments (substitute-keyword-arguments (package-arguments octave-cli) @@ -3739,16 +3742,17 @@ parts of it.") (define-public openblas (package (name "openblas") - (version "0.3.9") + (version "0.3.13") (source (origin - (method url-fetch) - (uri (string-append "mirror://sourceforge/openblas/v" version "/OpenBLAS%20" - version "%20version.tar.gz")) - (file-name (string-append name "-" version ".tar.gz")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/xianyi/OpenBLAS") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) (sha256 (base32 - "14iz9xnrb9xiwgj84j94mc74gg0zn2vsy9fmsijxxma1n7dck4w3")))) + "14jxh0v3jfbw4mfjx4mcz4dd51lyq7pqvh9k8dg94539ypzjr2lj")))) (build-system gnu-build-system) (arguments `(#:test-target "test" @@ -4575,7 +4579,7 @@ set.") `(("doc++" ,doc++) ("netpbm" ,netpbm) ("perl" ,perl) ; needed to run 'ppmquant' during tests - ("texlive" ,(texlive-union (list texlive-xypic + ("texlive" ,(texlive-updmap.cfg (list texlive-xypic texlive-cm texlive-latex-hyperref texlive-bibtex))) @@ -4595,12 +4599,6 @@ set.") "--with-blas") #:phases (modify-phases %standard-phases - (add-before 'build 'set-HOME - (lambda _ - ;; FIXME: texlive-union does not find the built - ;; metafonts, so it tries to generate them in HOME. - (setenv "HOME" "/tmp") - #t)) (add-before 'configure 'chdir-src (lambda _ (chdir "src"))) (replace 'configure |