1 files changed, 73 insertions, 0 deletions
diff --git a/gnu/packages/patches/vsearch-unbundle-cityhash.patch b/gnu/packages/patches/vsearch-unbundle-cityhash.patch
new file mode 100644
index 0000000000..b1ecb1f063
--- /dev/null
+++ b/gnu/packages/patches/vsearch-unbundle-cityhash.patch
@@ -0,0 +1,73 @@
+diff --git a/src/Makefile.am b/src/Makefile.am
+index e56a8a2..4adcc48 100644
+--- a/src/Makefile.am
++++ b/src/Makefile.am
+@@ -3,7 +3,7 @@ bin_PROGRAMS = $(top_builddir)/bin/vsearch
+ if TARGET_PPC
+ AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -mcpu=power8
+ else
+-AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g
++AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -lcityhash
+ endif
+ 
+ AM_CFLAGS=$(AM_CXXFLAGS)
+@@ -18,8 +18,6 @@ allpairs.h \
+ arch.h \
+ bitmap.h \
+ chimera.h \
+-city.h \
+-citycrc.h \
+ cluster.h \
+ cpu.h \
+ db.h \
+@@ -59,31 +57,26 @@ xstring.h
+ 
+ if TARGET_PPC
+ libcpu_a_SOURCES = cpu.cc $(VSEARCHHEADERS)
+-noinst_LIBRARIES = libcpu.a libcityhash.a
++noinst_LIBRARIES = libcpu.a
+ else
+ libcpu_sse2_a_SOURCES = cpu.cc $(VSEARCHHEADERS)
+ libcpu_sse2_a_CXXFLAGS = $(AM_CXXFLAGS) -msse2
+ libcpu_ssse3_a_SOURCES = cpu.cc $(VSEARCHHEADERS)
+ libcpu_ssse3_a_CXXFLAGS = $(AM_CXXFLAGS) -mssse3 -DSSSE3
+-noinst_LIBRARIES = libcpu_sse2.a libcpu_ssse3.a libcityhash.a
++noinst_LIBRARIES = libcpu_sse2.a libcpu_ssse3.a
+ endif
+ 
+-libcityhash_a_SOURCES = city.cc city.h
+-
+ if TARGET_WIN
+ 
+-libcityhash_a_CXXFLAGS = -Wall -Wno-sign-compare -O3 -g -D_MSC_VER
+-__top_builddir__bin_vsearch_LDFLAGS = -static
+-__top_builddir__bin_vsearch_LDADD = libregex.a libcityhash.a libcpu_ssse3.a libcpu_sse2.a
++__top_builddir__bin_vsearch_LDFLAGS = -static -lcityhash
++__top_builddir__bin_vsearch_LDADD = libregex.a libcpu_ssse3.a libcpu_sse2.a
+ 
+ else
+ 
+-libcityhash_a_CXXFLAGS = -Wall -Wno-sign-compare -O3 -g
+-
+ if TARGET_PPC
+-__top_builddir__bin_vsearch_LDADD = libcityhash.a libcpu.a
++__top_builddir__bin_vsearch_LDADD = libcpu.a
+ else
+-__top_builddir__bin_vsearch_LDADD = libcityhash.a libcpu_ssse3.a libcpu_sse2.a
++__top_builddir__bin_vsearch_LDADD = libcpu_ssse3.a libcpu_sse2.a
+ endif
+ 
+ endif
+diff --git a/src/vsearch.h b/src/vsearch.h
+index f2c244b..5f51bbe 100644
+--- a/src/vsearch.h
++++ b/src/vsearch.h
+@@ -148,7 +148,7 @@
+ #include <bzlib.h>
+ #endif
+ 
+-#include "city.h"
++#include <city.h>
+ #include "md5.h"
+ #include "sha1.h"
+