diff options
Diffstat (limited to 'gnu/packages/patches')
37 files changed, 1619 insertions, 2955 deletions
diff --git a/gnu/packages/patches/bastet-change-source-of-unordered_set.patch b/gnu/packages/patches/bastet-change-source-of-unordered_set.patch new file mode 100644 index 0000000000..ef3970a3e2 --- /dev/null +++ b/gnu/packages/patches/bastet-change-source-of-unordered_set.patch @@ -0,0 +1,40 @@ +From: Tobias Geerinckx-Rice <me@tobias.gr> +Date: Wed, 3 Oct 2018 23:30:42 +0200 +Subject: [PATCH] bastet: Change source of unordered_set. + +This allows building bastet 0.43.2 with boost >=1.66. +It was backported verbatim from the upstream master branch. + +From 0e03f8d4d6bc6949cf1c447e632ce0d1b98c4be1 Mon Sep 17 00:00:00 2001 +From: Federico Poloni <fpoloni@di.unipi.it> +Date: Wed, 4 Oct 2017 19:35:01 +0200 +Subject: [PATCH] Changed source of unordered_set (should hopefully fix #6 + without reopening #1) + +--- + BastetBlockChooser.hpp | 5 ++--- + 1 file changed, 2 insertions(+), 3 deletions(-) + +diff --git a/BastetBlockChooser.hpp b/BastetBlockChooser.hpp +index 992e556..7ee3b7c 100644 +--- a/BastetBlockChooser.hpp ++++ b/BastetBlockChooser.hpp +@@ -23,8 +23,7 @@ + + #include "Well.hpp" + +-#include <boost/tr1/tr1/unordered_set> +-#include <set> ++#include <boost/unordered_set.hpp> + #include <boost/functional/hash.hpp> + + namespace Bastet{ +@@ -75,7 +74,7 @@ namespace Bastet{ + public: + Searcher(BlockType b, const Well *well, Vertex v, WellVisitor *visitor); + private: +- std::tr1::unordered_set<Vertex> _visited; ++ boost::unordered_set<Vertex> _visited; + //std::set<Vertex> _visited; ^^ the above is more efficient, we need to do many inserts + BlockType _block; + const Well *_well; diff --git a/gnu/packages/patches/borg-respect-storage-quota.patch b/gnu/packages/patches/borg-respect-storage-quota.patch new file mode 100644 index 0000000000..d23d1ffc01 --- /dev/null +++ b/gnu/packages/patches/borg-respect-storage-quota.patch @@ -0,0 +1,32 @@ +Make sure the client respects the storage quota set by the server: + +https://github.com/borgbackup/borg/issues/4093 + +Patch copied from upstream source repository: + +https://github.com/borgbackup/borg/commit/975cc33206e0e3644626fb7204c34d2157715b61 + +From 975cc33206e0e3644626fb7204c34d2157715b61 Mon Sep 17 00:00:00 2001 +From: Manu <manu@snapdragon.cc> +Date: Wed, 3 Oct 2018 23:47:36 +0800 +Subject: [PATCH] Add storage_quota for forced_result if set by serve command. + +--- + src/borg/archiver.py | 1 + + 1 file changed, 1 insertion(+) + +diff --git a/src/borg/archiver.py b/src/borg/archiver.py +index 916725e7..279194c1 100644 +--- a/src/borg/archiver.py ++++ b/src/borg/archiver.py +@@ -4276,6 +4276,7 @@ def get_args(self, argv, cmd): + result.restrict_to_paths = forced_result.restrict_to_paths + result.restrict_to_repositories = forced_result.restrict_to_repositories + result.append_only = forced_result.append_only ++ result.storage_quota = forced_result.storage_quota + return result + + def parse_args(self, args=None): +-- +2.19.1 + diff --git a/gnu/packages/patches/clang-3.5-libsanitizer-ustat-fix.patch b/gnu/packages/patches/clang-3.5-libsanitizer-ustat-fix.patch new file mode 100644 index 0000000000..cfb09a8ce3 --- /dev/null +++ b/gnu/packages/patches/clang-3.5-libsanitizer-ustat-fix.patch @@ -0,0 +1,46 @@ +From d9d97cac3702b99a00cd113de98c41eb535d47ed Mon Sep 17 00:00:00 2001 +From: Efraim Flashner <efraim@flashner.co.il> +Date: Sun, 14 Oct 2018 12:11:30 +0300 +Subject: [PATCH] patch modified from the gcc patch series, also dealing with + ustat. + +--- + .../sanitizer_platform_limits_posix.cc | 15 +++++++++++++-- + 1 file changed, 13 insertions(+), 2 deletions(-) + +diff --git a/lib/sanitizer_common/sanitizer_platform_limits_posix.cc b/lib/sanitizer_common/sanitizer_platform_limits_posix.cc +index 29fea6e..570b9a5 100644 +--- a/lib/sanitizer_common/sanitizer_platform_limits_posix.cc ++++ b/lib/sanitizer_common/sanitizer_platform_limits_posix.cc +@@ -129,7 +129,6 @@ + #include <sys/statvfs.h> + #include <sys/timex.h> + #include <sys/user.h> +-#include <sys/ustat.h> + #include <linux/cyclades.h> + #include <linux/if_eql.h> + #include <linux/if_plip.h> +@@ -222,7 +221,19 @@ namespace __sanitizer { + #endif // SANITIZER_LINUX || SANITIZER_FREEBSD + + #if SANITIZER_LINUX && !SANITIZER_ANDROID +- unsigned struct_ustat_sz = sizeof(struct ustat); ++ // Use pre-computed size of struct ustat to avoid <sys/ustat.h> which ++ // has been removed from glibc 2.28. ++#if defined(__aarch64__) || defined(__s390x__) || defined (__mips64) \ ++ || defined(__powerpc64__) || defined(__arch64__) || defined(__sparcv9) \ ++ || defined(__x86_64__) ++#define SIZEOF_STRUCT_USTAT 32 ++#elif defined(__arm__) || defined(__i386__) || defined(__mips__) \ ++ || defined(__powerpc__) || defined(__s390__) ++#define SIZEOF_STRUCT_USTAT 20 ++#else ++#error Unknown size of struct ustat ++#endif ++ unsigned struct_ustat_sz = SIZEOF_STRUCT_USTAT; + unsigned struct_rlimit64_sz = sizeof(struct rlimit64); + unsigned struct_statvfs64_sz = sizeof(struct statvfs64); + #endif // SANITIZER_LINUX && !SANITIZER_ANDROID +-- +2.19.1 + diff --git a/gnu/packages/patches/clisp-glibc-2.26.patch b/gnu/packages/patches/clisp-glibc-2.26.patch deleted file mode 100644 index c8920ceccc..0000000000 --- a/gnu/packages/patches/clisp-glibc-2.26.patch +++ /dev/null @@ -1,20 +0,0 @@ -This patch comes from Debian. - -Description: cfree is not present in glibc-2.26, stop wrapping it -Author: Adam Conrad <adconrad@ubuntu.com> -Bug: https://sourceforge.net/p/clisp/bugs/717/ -Bug-Debian: https://bugs.debian.org/880686 -Applied-Upstream: https://sourceforge.net/p/clisp/clisp/ci/3bc928712d150ff1e5f6b2bfb7838655f3ff52fa/ -Reviewed-By: Sébastien Villemot <sebastien@debian.org> -Last-Update: 2017-11-27 - ---- clisp-2.49.20170913.orig/modules/bindings/glibc/linux.lisp -+++ clisp-2.49.20170913/modules/bindings/glibc/linux.lisp -@@ -649,7 +649,6 @@ - (def-call-out calloc (:arguments (nmemb size_t) (size size_t)) - (:return-type c-pointer)) - (def-call-out free (:arguments (ptr c-pointer)) (:return-type nil)) --(def-call-out cfree (:arguments (ptr c-pointer)) (:return-type nil)) - (def-call-out valloc (:arguments (size size_t)) (:return-type c-pointer)) - - (def-call-out abort (:arguments) (:return-type nil)) diff --git a/gnu/packages/patches/crawl-upgrade-saves.patch b/gnu/packages/patches/crawl-upgrade-saves.patch index 301942dc30..4c0b3a427b 100644 --- a/gnu/packages/patches/crawl-upgrade-saves.patch +++ b/gnu/packages/patches/crawl-upgrade-saves.patch @@ -5,8 +5,9 @@ By default crawl checks for a mtime difference on files in DATADIR to see if an upgrade is required, but guix nulls all file dates, and crawl would never upgrade saves. ---- a/source/database.cc 2016-05-31 09:56:08.000000000 +0200 -+++ a/source/database.cc 2017-06-05 03:00:19.270632107 +0200 +diff -ur a/source/database.cc b/source/database.cc +--- a/source/database.cc 2018-08-09 21:49:26.000000000 -0400 ++++ b/source/database.cc 2018-10-07 18:06:41.022445789 -0400 @@ -25,6 +25,7 @@ #include "syscalls.h" #include "threads.h" @@ -23,16 +24,16 @@ and crawl would never upgrade saves. TextDB *_parent; const char* lang() { return _parent ? Options.lang_name : 0; } public: -@@ -165,7 +167,7 @@ +@@ -163,7 +165,7 @@ - TextDB::TextDB(const char* db_name, const char* dir, ...) - : _db_name(db_name), _directory(dir), + TextDB::TextDB(const char* db_name, const char* dir, vector<string> files) + : _db_name(db_name), _directory(dir), _input_files(files), - _db(nullptr), timestamp(""), _parent(0), translation(0) + _db(nullptr), timestamp(""), version(""), _parent(0), translation(0) { - va_list args; - va_start(args, dir); -@@ -187,7 +189,7 @@ + } + +@@ -171,7 +173,7 @@ : _db_name(parent->_db_name), _directory(parent->_directory + Options.lang_name + "/"), _input_files(parent->_input_files), // FIXME: pointless copy @@ -41,7 +42,7 @@ and crawl would never upgrade saves. { } -@@ -202,6 +204,9 @@ +@@ -186,6 +188,9 @@ return false; timestamp = _query_database(*this, "TIMESTAMP", false, false, true); @@ -51,7 +52,7 @@ and crawl would never upgrade saves. if (timestamp.empty()) return false; -@@ -245,6 +250,9 @@ +@@ -229,6 +234,9 @@ string ts; bool no_files = true; @@ -61,7 +62,7 @@ and crawl would never upgrade saves. for (const string &file : _input_files) { string full_input_path = _directory + file; -@@ -261,7 +269,7 @@ +@@ -245,7 +253,7 @@ ts += buf; } @@ -70,7 +71,7 @@ and crawl would never upgrade saves. { // No point in empty databases, although for simplicity keep ones // for disappeared translations for now. -@@ -321,7 +329,10 @@ +@@ -313,7 +321,10 @@ _store_text_db(full_input_path, _db); } } diff --git a/gnu/packages/patches/emacs-exwm-fix-fullscreen-issue.patch b/gnu/packages/patches/emacs-exwm-fix-fullscreen-issue.patch deleted file mode 100644 index 5c9bd36598..0000000000 --- a/gnu/packages/patches/emacs-exwm-fix-fullscreen-issue.patch +++ /dev/null @@ -1,27 +0,0 @@ -From 13a14579cc1bb772735f895dd5b4b90c6812f3ee Mon Sep 17 00:00:00 2001 -From: Chris Feng <chris.w.feng@gmail.com> -Date: Sun, 29 Jul 2018 00:00:00 +0000 -Subject: [PATCH] Fix issues with destroying full screen X windows - -* exwm-manage.el (exwm-manage--unmanage-window): Set the Emacs window -of an full screen X window as non-dedicated before killing its buffer -so as not to cause other side effects. ---- - exwm-manage.el | 4 ++++ - 1 file changed, 4 insertions(+) - -diff --git a/exwm-manage.el b/exwm-manage.el -index a0a9e05..349157f 100644 ---- a/exwm-manage.el -+++ b/exwm-manage.el -@@ -392,6 +392,10 @@ manager is shutting down." - :window window :parent exwm--root :x 0 :y 0)) - (xcb:+request exwm--connection - (make-instance 'xcb:DestroyWindow :window container)))) -+ (when (exwm-layout--fullscreen-p) -+ (let ((window (get-buffer-window))) -+ (when window -+ (set-window-dedicated-p window nil)))) - (exwm-manage--set-client-list) - (xcb:flush exwm--connection)) - (let ((kill-buffer-func diff --git a/gnu/packages/patches/ghc-haddock-library-unbundle.patch b/gnu/packages/patches/ghc-haddock-library-unbundle.patch new file mode 100644 index 0000000000..0e8b548956 --- /dev/null +++ b/gnu/packages/patches/ghc-haddock-library-unbundle.patch @@ -0,0 +1,86 @@ +This patch (inspired by Debian) allows ghc-haddock-library to use our +ghc-attoparsec package instead of using a bundled version. + +--- a/haddock-library.cabal 2018-09-01 01:22:18.676855884 -0400 ++++ b/haddock-library.cabal 2018-09-01 01:25:10.501150260 -0400 +@@ -10,7 +10,6 @@ + itself, see the ‘haddock’ package. + license: BSD3 + license-files: LICENSE +- vendor/attoparsec-0.13.1.0/LICENSE + maintainer: Alex Biehl <alexbiehl@gmail.com>, Simon Hengel <sol@typeful.net>, Mateusz Kowalczyk <fuuzetsu@fuuzetsu.co.uk> + homepage: http://www.haskell.org/haddock/ + bug-reports: https://github.com/haskell/haddock/issues +@@ -28,7 +27,6 @@ + , containers >= 0.4.2.1 && < 0.6 + , transformers >= 0.3.0 && < 0.6 + +- -- internal sub-lib + build-depends: attoparsec + + hs-source-dirs: src +@@ -49,42 +47,6 @@ + if impl(ghc >= 8.0) + ghc-options: -Wcompat -Wnoncanonical-monad-instances -Wnoncanonical-monadfail-instances + +-library attoparsec +- default-language: Haskell2010 +- +- build-depends: +- base >= 4.5 && < 4.12 +- , bytestring >= 0.9.2.1 && < 0.11 +- , deepseq >= 1.3 && < 1.5 +- +- hs-source-dirs: vendor/attoparsec-0.13.1.0 +- +- -- NB: haddock-library needs only small part of lib:attoparsec +- -- internally, so we only bundle that subset here +- exposed-modules: +- Data.Attoparsec.ByteString +- Data.Attoparsec.ByteString.Char8 +- Data.Attoparsec.Combinator +- +- other-modules: +- Data.Attoparsec +- Data.Attoparsec.ByteString.Buffer +- Data.Attoparsec.ByteString.FastSet +- Data.Attoparsec.ByteString.Internal +- Data.Attoparsec.Internal +- Data.Attoparsec.Internal.Fhthagn +- Data.Attoparsec.Internal.Types +- Data.Attoparsec.Number +- +- ghc-options: -funbox-strict-fields -Wall -fwarn-tabs -O2 +- +- ghc-options: -Wall +- if impl(ghc >= 8.0) +- ghc-options: -Wcompat -Wnoncanonical-monad-instances -Wnoncanonical-monadfail-instances +- else +- build-depends: semigroups ^>= 0.18.3, fail ^>= 4.9.0.0 +- +- + test-suite spec + type: exitcode-stdio-1.0 + default-language: Haskell2010 +@@ -115,11 +77,10 @@ + , hspec ^>= 2.4.4 + , QuickCheck ^>= 2.11 + +- -- internal sub-lib + build-depends: attoparsec + + -- Versions for the dependencies below are transitively pinned by +- -- dependency on haddock-library:lib:attoparsec ++ -- dependency on attoparsec + build-depends: + base + , bytestring +@@ -146,7 +107,7 @@ + haddock-library + + -- Versions for the dependencies below are transitively pinned by +- -- dependency on haddock-library:lib:attoparsec ++ -- dependency on attoparsec + build-depends: + base + diff --git a/gnu/packages/patches/gnucash-disable-failing-tests.patch b/gnu/packages/patches/gnucash-disable-failing-tests.patch new file mode 100644 index 0000000000..e0fdd86b5d --- /dev/null +++ b/gnu/packages/patches/gnucash-disable-failing-tests.patch @@ -0,0 +1,39 @@ +test-stress-options.scm does not exist, and test-qof passes when run in the +build directory after the gnucash build. + +diff -ur gnucash-3.3.old/gnucash/report/standard-reports/test/CMakeLists.txt gnucash-3.3/gnucash/report/standard-reports/test/CMakeLists.txt +--- gnucash-3.3.old/gnucash/report/standard-reports/test/CMakeLists.txt 2018-10-04 09:29:00.916641417 -0400 ++++ gnucash-3.3/gnucash/report/standard-reports/test/CMakeLists.txt 2018-10-04 09:30:52.962504860 -0400 +@@ -13,10 +13,6 @@ + test-income-gst.scm + ) + +-set(scm_test_with_textual_ports_SOURCES +- test-stress-options.scm +-) +- + set(GUILE_DEPENDS + scm-gnc-module + scm-app-utils +@@ -31,9 +27,6 @@ + + if (HAVE_SRFI64) + gnc_add_scheme_tests("${scm_test_with_srfi64_SOURCES}") +- if (HAVE_TEXT_PORTS) +- gnc_add_scheme_tests("${scm_test_with_textual_ports_SOURCES}") +- endif (HAVE_TEXT_PORTS) + endif (HAVE_SRFI64) + + gnc_add_scheme_tests("${scm_test_standard_reports_SOURCES}") +diff -ur gnucash-3.3.old/libgnucash/engine/test/CMakeLists.txt gnucash-3.3/libgnucash/engine/test/CMakeLists.txt +--- gnucash-3.3.old/libgnucash/engine/test/CMakeLists.txt 2018-10-04 09:29:00.876640751 -0400 ++++ gnucash-3.3/libgnucash/engine/test/CMakeLists.txt 2018-10-05 10:46:22.542962546 -0400 +@@ -54,8 +54,6 @@ + # This test does not run on Win32 + if (NOT WIN32) + set(SOURCES ${test_qof_SOURCES} ${CMAKE_SOURCE_DIR}/common/test-core/unittest-support.c) +- add_engine_test(test-qof "${SOURCES}") +- target_compile_definitions(test-qof PRIVATE TESTPROG=test_qof) + + set(SOURCES ${test_engine_SOURCES} ${CMAKE_SOURCE_DIR}/common/test-core/unittest-support.c) + add_engine_test(test-engine "${SOURCES}") diff --git a/gnu/packages/patches/gnucash-price-quotes-perl.patch b/gnu/packages/patches/gnucash-price-quotes-perl.patch index 982763f0ec..3101ddb007 100644 --- a/gnu/packages/patches/gnucash-price-quotes-perl.patch +++ b/gnu/packages/patches/gnucash-price-quotes-perl.patch @@ -1,8 +1,9 @@ After wrapping gnc-fq-check and gnc-fq-helper we can no longer execute them with perl, so execute them directly instead. ---- gnucash-2.6.6/src/scm/price-quotes.scm.orig 2014-04-27 17:42:28.000000000 -0500 -+++ gnucash-2.6.6/src/scm/price-quotes.scm 2015-07-09 16:12:11.196218472 -0500 +diff -ur gnucash-3.2.old/libgnucash/scm/price-quotes.scm gnucash-3.2/libgnucash/scm/price-quotes.scm +--- gnucash-3.2.old/libgnucash/scm/price-quotes.scm 2018-09-15 00:48:33.718389646 -0400 ++++ gnucash-3.2/libgnucash/scm/price-quotes.scm 2018-09-15 13:51:49.249862724 -0400 @@ -74,7 +74,7 @@ (define (start-program) (if (not (string-null? gnc:*finance-quote-check*)) diff --git a/gnu/packages/patches/grub-check-error-efibootmgr.patch b/gnu/packages/patches/grub-check-error-efibootmgr.patch index b2fd160c9a..efeb20f213 100644 --- a/gnu/packages/patches/grub-check-error-efibootmgr.patch +++ b/gnu/packages/patches/grub-check-error-efibootmgr.patch @@ -160,7 +160,7 @@ index 5e4cdfd..690f180 100644 /* Try to make this image bootable using the EFI Boot Manager, if available. */ if (!efi_distributor || efi_distributor[0] == '\0') -@@ -1887,8 +1892,11 @@ main (int argc, char *argv[]) +@@ -1887,7 +1892,10 @@ main (int argc, char *argv[]) efidir_grub_dev->disk->name, (part ? ",": ""), (part ? : "")); grub_free (part); @@ -173,4 +173,25 @@ index 5e4cdfd..690f180 100644 + strerror (ret)); } break; + + +Below is a followup to the patch above: the uninitialized variable could lead +‘grub-install’ to error out when it shouldn’t (seen on an AArch64 box where +‘grub_install_remove_efi_entries_by_distributor’ didn't have any entry to +remove): + + grub-install: error: efibootmgr failed to register the boot entry: Unknown error 65535. + +See <http://lists.gnu.org/archive/html/bug-grub/2018-10/msg00006.html>. + +--- grub-2.02/grub-core/osdep/unix/platform.c 2018-10-17 22:21:53.015284846 +0200 ++++ grub-2.02/grub-core/osdep/unix/platform.c 2018-10-17 22:21:55.595271222 +0200 +@@ -85,7 +85,7 @@ grub_install_remove_efi_entries_by_distr + pid_t pid = grub_util_exec_pipe ((const char * []){ "efibootmgr", NULL }, &fd); + char *line = NULL; + size_t len = 0; +- int rc; ++ int rc = 0; + if (!pid) + { diff --git a/gnu/packages/patches/hmmer-remove-cpu-specificity.patch b/gnu/packages/patches/hmmer-remove-cpu-specificity.patch deleted file mode 100644 index ba98db4d0e..0000000000 --- a/gnu/packages/patches/hmmer-remove-cpu-specificity.patch +++ /dev/null @@ -1,22 +0,0 @@ -This patch removes compilation flags which make the build for the machine -where compilation takes place, rendering the build not reproducible. - -diff --git a/configure b/configure -index 8b6aaef..49a6afc 100755 ---- a/configure -+++ b/configure -@@ -6125,14 +6125,6 @@ fi # guess arch - - if test "x$ax_gcc_arch" != x -a "x$ax_gcc_arch" != xno; then - for arch in $ax_gcc_arch; do -- if test "x$acx_maxopt_portable" = xyes; then # if we require portable code -- flags="-mtune=$arch" -- # -mcpu=$arch and m$arch generate nonportable code on every arch except -- # x86. And some other arches (e.g. Alpha) don't accept -mtune. Grrr. -- case $host_cpu in i*86|x86_64*) flags="$flags -mcpu=$arch -m$arch";; esac -- else -- flags="-march=$arch -mcpu=$arch -m$arch" -- fi - for flag in $flags; do - as_CACHEVAR=`$as_echo "ax_cv_check_cflags__$flag" | $as_tr_sh` - { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether C compiler accepts $flag" >&5 diff --git a/gnu/packages/patches/icecat-CVE-2018-12383.patch b/gnu/packages/patches/icecat-CVE-2018-12383.patch new file mode 100644 index 0000000000..17ca0f3773 --- /dev/null +++ b/gnu/packages/patches/icecat-CVE-2018-12383.patch @@ -0,0 +1,103 @@ +Based on upstream changeset: + https://hg.mozilla.org/releases/mozilla-esr60/rev/300efdbc9fe1 +but with the git binary patch and related test changes omitted, +and adapted to apply cleanly to GNU IceCat. + +# HG changeset patch +# User David Keeler <dkeeler@mozilla.com> +# Date 1531860660 25200 +# Node ID 300efdbc9fe1f9165428c7934861033935b5abfa +# Parent 80a4a7ef281374dbb2afda8edac54665b14b9ef8 +Bug 1475775 - Clean up old NSS DB file after upgrade if necessary. r=franziskus, r=mattn, a=RyanVM + +Reviewers: franziskus, mattn + +Bug #: 1475775 + +Differential Revision: https://phabricator.services.mozilla.com/D2202 + +diff --git a/security/manager/ssl/nsNSSComponent.cpp b/security/manager/ssl/nsNSSComponent.cpp +--- a/security/manager/ssl/nsNSSComponent.cpp ++++ b/security/manager/ssl/nsNSSComponent.cpp +@@ -1935,16 +1935,61 @@ AttemptToRenameBothPKCS11ModuleDBVersion + NS_NAMED_LITERAL_CSTRING(sqlModuleDBFilename, "pkcs11.txt"); + nsresult rv = AttemptToRenamePKCS11ModuleDB(profilePath, + legacyModuleDBFilename); + if (NS_FAILED(rv)) { + return rv; + } + return AttemptToRenamePKCS11ModuleDB(profilePath, sqlModuleDBFilename); + } ++ ++// When we changed from the old dbm database format to the newer sqlite ++// implementation, the upgrade process left behind the existing files. Suppose a ++// user had not set a password for the old key3.db (which is about 99% of ++// users). After upgrading, both the old database and the new database are ++// unprotected. If the user then sets a password for the new database, the old ++// one will not be protected. In this scenario, we should probably just remove ++// the old database (it would only be relevant if the user downgraded to a ++// version of IceCat before 58, but we have to trade this off against the ++// user's old private keys being unexpectedly unprotected after setting a ++// password). ++// This was never an issue on Android because we always used the new ++// implementation. ++static void ++MaybeCleanUpOldNSSFiles(const nsACString& profilePath) ++{ ++ UniquePK11SlotInfo slot(PK11_GetInternalKeySlot()); ++ if (!slot) { ++ return; ++ } ++ // Unfortunately we can't now tell the difference between "there already was a ++ // password when the upgrade happened" and "there was not a password but then ++ // the user added one after upgrading". ++ bool hasPassword = PK11_NeedLogin(slot.get()) && ++ !PK11_NeedUserInit(slot.get()); ++ if (!hasPassword) { ++ return; ++ } ++ nsCOMPtr<nsIFile> dbFile = do_CreateInstance("@mozilla.org/file/local;1"); ++ if (!dbFile) { ++ return; ++ } ++ nsresult rv = dbFile->InitWithNativePath(profilePath); ++ if (NS_FAILED(rv)) { ++ return; ++ } ++ NS_NAMED_LITERAL_CSTRING(keyDBFilename, "key3.db"); ++ rv = dbFile->AppendNative(keyDBFilename); ++ if (NS_FAILED(rv)) { ++ return; ++ } ++ // Since this isn't a directory, the `recursive` argument to `Remove` is ++ // irrelevant. ++ Unused << dbFile->Remove(false); ++} + #endif // ifndef ANDROID + + // Given a profile directory, attempt to initialize NSS. If nocertdb is true, + // (or if we don't have a profile directory) simply initialize NSS in no DB mode + // and return. Otherwise, first attempt to initialize in read/write mode, and + // then read-only mode if that fails. If both attempts fail, we may be failing + // to initialize an NSS DB collection that has FIPS mode enabled. Attempt to + // ascertain if this is the case, and if so, rename the offending PKCS#11 module +@@ -1966,16 +2011,19 @@ InitializeNSSWithFallbacks(const nsACStr + + // Try read/write mode. If we're in safeMode, we won't load PKCS#11 modules. + #ifndef ANDROID + PRErrorCode savedPRErrorCode1; + #endif // ifndef ANDROID + SECStatus srv = ::mozilla::psm::InitializeNSS(profilePath, false, !safeMode); + if (srv == SECSuccess) { + MOZ_LOG(gPIPNSSLog, LogLevel::Debug, ("initialized NSS in r/w mode")); ++#ifndef ANDROID ++ MaybeCleanUpOldNSSFiles(profilePath); ++#endif // ifndef ANDROID + return NS_OK; + } + #ifndef ANDROID + savedPRErrorCode1 = PR_GetError(); + PRErrorCode savedPRErrorCode2; + #endif // ifndef ANDROID + // That failed. Try read-only mode. + srv = ::mozilla::psm::InitializeNSS(profilePath, true, !safeMode); diff --git a/gnu/packages/patches/icecat-CVE-2018-5157-and-CVE-2018-5158.patch b/gnu/packages/patches/icecat-CVE-2018-5157-and-CVE-2018-5158.patch deleted file mode 100644 index b776640133..0000000000 --- a/gnu/packages/patches/icecat-CVE-2018-5157-and-CVE-2018-5158.patch +++ /dev/null @@ -1,441 +0,0 @@ -Based on <https://hg.mozilla.org/releases/mozilla-esr52/rev/608e76ec5ba2> -Adapted to apply cleanly to GNU IceCat. - -# HG changeset patch -# User Ryan VanderMeulen <ryanvm@gmail.com> -# Date 1523630807 14400 -# Node ID 608e76ec5ba25cec2271d2b400c7bce2d4c5ef79 -# Parent 10b7f43b536f93151201d44d304c991aa9af5d0c -Bug 1452075 - Backport some upstream pdf.js fixes to ESR52. r=bdahl, r=yury, a=RyanVM - -diff --git a/browser/extensions/pdfjs/content/PdfStreamConverter.jsm b/browser/extensions/pdfjs/content/PdfStreamConverter.jsm ---- a/browser/extensions/pdfjs/content/PdfStreamConverter.jsm -+++ b/browser/extensions/pdfjs/content/PdfStreamConverter.jsm -@@ -24,17 +24,18 @@ const Cc = Components.classes; - const Ci = Components.interfaces; - const Cr = Components.results; - const Cu = Components.utils; - // True only if this is the version of pdf.js that is included with icecat. - const MOZ_CENTRAL = JSON.parse('true'); - const PDFJS_EVENT_ID = 'pdf.js.message'; - const PDF_CONTENT_TYPE = 'application/pdf'; - const PREF_PREFIX = 'pdfjs'; --const PDF_VIEWER_WEB_PAGE = 'resource://pdf.js/web/viewer.html'; -+const PDF_VIEWER_ORIGIN = "resource://pdf.js"; -+const PDF_VIEWER_WEB_PAGE = "resource://pdf.js/web/viewer.html"; - const MAX_NUMBER_OF_PREFS = 50; - const MAX_STRING_PREF_LENGTH = 128; - - Cu.import('resource://gre/modules/XPCOMUtils.jsm'); - Cu.import('resource://gre/modules/Services.jsm'); - Cu.import('resource://gre/modules/NetUtil.jsm'); - - XPCOMUtils.defineLazyModuleGetter(this, 'NetworkManager', -@@ -105,21 +106,25 @@ function log(aMsg) { - if (!getBoolPref(PREF_PREFIX + '.pdfBugEnabled', false)) { - return; - } - var msg = 'PdfStreamConverter.js: ' + (aMsg.join ? aMsg.join('') : aMsg); - Services.console.logStringMessage(msg); - dump(msg + '\n'); - } - --function getDOMWindow(aChannel) { -+function getDOMWindow(aChannel, aPrincipal) { - var requestor = aChannel.notificationCallbacks ? - aChannel.notificationCallbacks : - aChannel.loadGroup.notificationCallbacks; - var win = requestor.getInterface(Components.interfaces.nsIDOMWindow); -+ // Ensure the window wasn't navigated to something that is not PDF.js. -+ if (!win.document.nodePrincipal.equals(aPrincipal)) { -+ return null; -+ } - return win; - } - - function getLocalizedStrings(path) { - var stringBundle = Cc['@mozilla.org/intl/stringbundle;1']. - getService(Ci.nsIStringBundleService). - createBundle('chrome://pdf.js/locale/' + path); - -@@ -627,31 +632,31 @@ var RangedChromeActions = (function Rang - data = this.dataListener.readData(); - - this.dataListener.onprogress = function (loaded, total) { - self.domWindow.postMessage({ - pdfjsLoadAction: 'progressiveRead', - loaded: loaded, - total: total, - chunk: self.dataListener.readData() -- }, '*'); -+ }, PDF_VIEWER_ORIGIN); - }; - this.dataListener.oncomplete = function () { - self.dataListener = null; - }; - } - - this.domWindow.postMessage({ - pdfjsLoadAction: 'supportsRangedLoading', - rangeEnabled: this.rangeEnabled, - streamingEnabled: this.streamingEnabled, - pdfUrl: this.pdfUrl, - length: this.contentLength, - data: data -- }, '*'); -+ }, PDF_VIEWER_ORIGIN); - - return true; - }; - - proto.requestDataRange = function RangedChromeActions_requestDataRange(args) { - if (!this.rangeEnabled) { - return; - } -@@ -663,23 +668,23 @@ var RangedChromeActions = (function Rang - // errors from chrome code for non-range requests, so this doesn't - // seem high-pri - this.networkManager.requestRange(begin, end, { - onDone: function RangedChromeActions_onDone(args) { - domWindow.postMessage({ - pdfjsLoadAction: 'range', - begin: args.begin, - chunk: args.chunk -- }, '*'); -+ }, PDF_VIEWER_ORIGIN); - }, - onProgress: function RangedChromeActions_onProgress(evt) { - domWindow.postMessage({ - pdfjsLoadAction: 'rangeProgress', - loaded: evt.loaded, -- }, '*'); -+ }, PDF_VIEWER_ORIGIN); - } - }); - }; - - proto.abortLoading = function RangedChromeActions_abortLoading() { - this.networkManager.abortAllRequests(); - if (this.originalRequest) { - this.originalRequest.cancel(Cr.NS_BINDING_ABORTED); -@@ -718,26 +723,26 @@ var StandardChromeActions = (function St - var self = this; - - this.dataListener.onprogress = function ChromeActions_dataListenerProgress( - loaded, total) { - self.domWindow.postMessage({ - pdfjsLoadAction: 'progress', - loaded: loaded, - total: total -- }, '*'); -+ }, PDF_VIEWER_ORIGIN); - }; - - this.dataListener.oncomplete = - function StandardChromeActions_dataListenerComplete(data, errorCode) { - self.domWindow.postMessage({ - pdfjsLoadAction: 'complete', - data: data, - errorCode: errorCode -- }, '*'); -+ }, PDF_VIEWER_ORIGIN); - - self.dataListener = null; - self.originalRequest = null; - }; - - return true; - }; - -@@ -972,31 +977,35 @@ PdfStreamConverter.prototype = { - var proxy = { - onStartRequest: function(request, context) { - listener.onStartRequest(aRequest, aContext); - }, - onDataAvailable: function(request, context, inputStream, offset, count) { - listener.onDataAvailable(aRequest, aContext, inputStream, - offset, count); - }, -- onStopRequest: function(request, context, statusCode) { -- // We get the DOM window here instead of before the request since it -- // may have changed during a redirect. -- var domWindow = getDOMWindow(channel); -+ onStopRequest(request, context, statusCode) { -+ var domWindow = getDOMWindow(channel, resourcePrincipal); -+ if (!Components.isSuccessCode(statusCode) || !domWindow) { -+ // The request may have been aborted and the document may have been -+ // replaced with something that is not PDF.js, abort attaching. -+ listener.onStopRequest(aRequest, context, statusCode); -+ return; -+ } - var actions; - if (rangeRequest || streamRequest) { - actions = new RangedChromeActions( - domWindow, contentDispositionFilename, aRequest, - rangeRequest, streamRequest, dataListener); - } else { - actions = new StandardChromeActions( - domWindow, contentDispositionFilename, aRequest, dataListener); - } - var requestListener = new RequestListener(actions); -- domWindow.addEventListener(PDFJS_EVENT_ID, function(event) { -+ domWindow.document.addEventListener(PDFJS_EVENT_ID, function(event) { - requestListener.receive(event); - }, false, true); - if (actions.supportsIntegratedFind()) { - var findEventManager = new FindEventManager(domWindow); - findEventManager.bind(); - } - listener.onStopRequest(aRequest, aContext, statusCode); - -diff --git a/browser/extensions/pdfjs/content/build/pdf.worker.js b/browser/extensions/pdfjs/content/build/pdf.worker.js ---- a/browser/extensions/pdfjs/content/build/pdf.worker.js -+++ b/browser/extensions/pdfjs/content/build/pdf.worker.js -@@ -41648,16 +41648,32 @@ - var error = sharedUtil.error; - var info = sharedUtil.info; - var isArray = sharedUtil.isArray; - var isBool = sharedUtil.isBool; - var isDict = corePrimitives.isDict; - var isStream = corePrimitives.isStream; - var PostScriptLexer = corePsParser.PostScriptLexer; - var PostScriptParser = corePsParser.PostScriptParser; -+ function toNumberArray(arr) { -+ if (!Array.isArray(arr)) { -+ return null; -+ } -+ var length = arr.length; -+ for (var i = 0; i < length; i++) { -+ if (typeof arr[i] !== 'number') { -+ var result = new Array(length); -+ for (var j = 0; j < length; j++) { -+ result[j] = +arr[j]; -+ } -+ return result; -+ } -+ } -+ return arr; -+ } - var PDFFunction = function PDFFunctionClosure() { - var CONSTRUCT_SAMPLED = 0; - var CONSTRUCT_INTERPOLATED = 2; - var CONSTRUCT_STICHED = 3; - var CONSTRUCT_POSTSCRIPT = 4; - return { - getSampleArray: function PDFFunction_getSampleArray(size, outputSize, bps, str) { - var i, ii; -@@ -41747,43 +41763,43 @@ - out[index] = [ - arr[i], - arr[i + 1] - ]; - ++index; - } - return out; - } -- var domain = dict.getArray('Domain'); -- var range = dict.getArray('Range'); -+ var domain = toNumberArray(dict.getArray('Domain')); -+ var range = toNumberArray(dict.getArray('Range')); - if (!domain || !range) { - error('No domain or range'); - } - var inputSize = domain.length / 2; - var outputSize = range.length / 2; - domain = toMultiArray(domain); - range = toMultiArray(range); -- var size = dict.get('Size'); -+ var size = toNumberArray(dict.get('Size')); - var bps = dict.get('BitsPerSample'); - var order = dict.get('Order') || 1; - if (order !== 1) { - // No description how cubic spline interpolation works in PDF32000:2008 - // As in poppler, ignoring order, linear interpolation may work as good - info('No support for cubic spline interpolation: ' + order); - } -- var encode = dict.getArray('Encode'); -+ var encode = toNumberArray(dict.getArray('Encode')); - if (!encode) { - encode = []; - for (var i = 0; i < inputSize; ++i) { -- encode.push(0); -- encode.push(size[i] - 1); -- } -- } -- encode = toMultiArray(encode); -- var decode = dict.getArray('Decode'); -+ encode.push([0, size[i] - 1]); -+ } -+ } else { -+ encode = toMultiArray(encode); -+ } -+ var decode = toNumberArray(dict.getArray('Decode')); - if (!decode) { - decode = range; - } else { - decode = toMultiArray(decode); - } - var samples = this.getSampleArray(size, outputSize, bps, str); - return [ - CONSTRUCT_SAMPLED, -@@ -41868,22 +41884,19 @@ - // Decode_2j, Decode_2j+1) - rj = interpolate(rj, 0, 1, decode[j][0], decode[j][1]); - // y_j = min(max(r_j, range_2j), range_2j+1) - dest[destOffset + j] = Math.min(Math.max(rj, range[j][0]), range[j][1]); - } - }; - }, - constructInterpolated: function PDFFunction_constructInterpolated(str, dict) { -- var c0 = dict.getArray('C0') || [0]; -- var c1 = dict.getArray('C1') || [1]; -+ var c0 = toNumberArray(dict.getArray('C0')) || [0]; -+ var c1 = toNumberArray(dict.getArray('C1')) || [1]; - var n = dict.get('N'); -- if (!isArray(c0) || !isArray(c1)) { -- error('Illegal dictionary for interpolated function'); -- } - var length = c0.length; - var diff = []; - for (var i = 0; i < length; ++i) { - diff.push(c1[i] - c0[i]); - } - return [ - CONSTRUCT_INTERPOLATED, - c0, -@@ -41899,49 +41912,45 @@ - return function constructInterpolatedFromIRResult(src, srcOffset, dest, destOffset) { - var x = n === 1 ? src[srcOffset] : Math.pow(src[srcOffset], n); - for (var j = 0; j < length; ++j) { - dest[destOffset + j] = c0[j] + x * diff[j]; - } - }; - }, - constructStiched: function PDFFunction_constructStiched(fn, dict, xref) { -- var domain = dict.getArray('Domain'); -+ var domain = toNumberArray(dict.getArray('Domain')); - if (!domain) { - error('No domain'); - } - var inputSize = domain.length / 2; - if (inputSize !== 1) { - error('Bad domain for stiched function'); - } - var fnRefs = dict.get('Functions'); - var fns = []; - for (var i = 0, ii = fnRefs.length; i < ii; ++i) { -- fns.push(PDFFunction.getIR(xref, xref.fetchIfRef(fnRefs[i]))); -- } -- var bounds = dict.getArray('Bounds'); -- var encode = dict.getArray('Encode'); -+ fns.push(PDFFunction.parse(xref, xref.fetchIfRef(fnRefs[i]))); -+ } -+ var bounds = toNumberArray(dict.getArray('Bounds')); -+ var encode = toNumberArray(dict.getArray('Encode')); - return [ - CONSTRUCT_STICHED, - domain, - bounds, - encode, - fns - ]; - }, - constructStichedFromIR: function PDFFunction_constructStichedFromIR(IR) { - var domain = IR[1]; - var bounds = IR[2]; - var encode = IR[3]; -- var fnsIR = IR[4]; -- var fns = []; -+ var fns = IR[4]; - var tmpBuf = new Float32Array(1); -- for (var i = 0, ii = fnsIR.length; i < ii; i++) { -- fns.push(PDFFunction.fromIR(fnsIR[i])); -- } - return function constructStichedFromIRResult(src, srcOffset, dest, destOffset) { - var clip = function constructStichedFromIRClip(v, min, max) { - if (v > max) { - v = max; - } else if (v < min) { - v = min; - } - return v; -@@ -41968,18 +41977,18 @@ - // Prevent the value from becoming NaN as a result - // of division by zero (fixes issue6113.pdf). - tmpBuf[0] = dmin === dmax ? rmin : rmin + (v - dmin) * (rmax - rmin) / (dmax - dmin); - // call the appropriate function - fns[i](tmpBuf, 0, dest, destOffset); - }; - }, - constructPostScript: function PDFFunction_constructPostScript(fn, dict, xref) { -- var domain = dict.getArray('Domain'); -- var range = dict.getArray('Range'); -+ var domain = toNumberArray(dict.getArray('Domain')); -+ var range = toNumberArray(dict.getArray('Range')); - if (!domain) { - error('No domain.'); - } - if (!range) { - error('No range.'); - } - var lexer = new PostScriptLexer(fn); - var parser = new PostScriptParser(lexer); -@@ -42928,18 +42937,18 @@ - case 'IndexedCS': - var baseIndexedCS = IR[1]; - var hiVal = IR[2]; - var lookup = IR[3]; - return new IndexedCS(ColorSpace.fromIR(baseIndexedCS), hiVal, lookup); - case 'AlternateCS': - var numComps = IR[1]; - var alt = IR[2]; -- var tintFnIR = IR[3]; -- return new AlternateCS(numComps, ColorSpace.fromIR(alt), PDFFunction.fromIR(tintFnIR)); -+ var tintFn = IR[3]; -+ return new AlternateCS(numComps, ColorSpace.fromIR(alt), tintFn); - case 'LabCS': - whitePoint = IR[1]; - blackPoint = IR[2]; - var range = IR[3]; - return new LabCS(whitePoint, blackPoint, range); - default: - error('Unknown name ' + name); - } -@@ -43067,22 +43076,22 @@ - var name = xref.fetchIfRef(cs[1]); - numComps = 1; - if (isName(name)) { - numComps = 1; - } else if (isArray(name)) { - numComps = name.length; - } - alt = ColorSpace.parseToIR(cs[2], xref, res); -- var tintFnIR = PDFFunction.getIR(xref, xref.fetchIfRef(cs[3])); -+ var tintFn = PDFFunction.parse(xref, xref.fetchIfRef(cs[3])); - return [ - 'AlternateCS', - numComps, - alt, -- tintFnIR -+ tintFn - ]; - case 'Lab': - params = xref.fetchIfRef(cs[1]); - whitePoint = params.getArray('WhitePoint'); - blackPoint = params.getArray('BlackPoint'); - var range = params.getArray('Range'); - return [ - 'LabCS', -@@ -52483,9 +52492,9 @@ - initializeWorker(); - } - exports.setPDFNetworkStreamClass = setPDFNetworkStreamClass; - exports.WorkerTask = WorkerTask; - exports.WorkerMessageHandler = WorkerMessageHandler; - })); - }.call(pdfjsLibs)); - exports.WorkerMessageHandler = pdfjsLibs.pdfjsCoreWorker.WorkerMessageHandler; --})); -\ No newline at end of file -+})); - diff --git a/gnu/packages/patches/icecat-avoid-bundled-libraries.patch b/gnu/packages/patches/icecat-avoid-bundled-libraries.patch index 114631517a..33203b1a33 100644 --- a/gnu/packages/patches/icecat-avoid-bundled-libraries.patch +++ b/gnu/packages/patches/icecat-avoid-bundled-libraries.patch @@ -1,8 +1,8 @@ Fixes needed when avoiding bundled libraries. ---- icecat-52.0.2/xpcom/build/moz.build.orig -+++ icecat-52.0.2/xpcom/build/moz.build -@@ -93,10 +93,5 @@ +--- icecat-60.2.0/xpcom/build/moz.build.orig 2018-09-13 17:46:49.000000000 -0400 ++++ icecat-60.2.0/xpcom/build/moz.build 2018-09-22 04:26:50.659564554 -0400 +@@ -99,10 +99,5 @@ '/docshell/base', ] @@ -13,9 +13,9 @@ Fixes needed when avoiding bundled libraries. - if CONFIG['MOZ_WIDGET_TOOLKIT'] == 'cocoa': CXXFLAGS += CONFIG['TK_CFLAGS'] ---- icecat-52.0.2/storage/moz.build.orig -+++ icecat-52.0.2/storage/moz.build -@@ -114,7 +114,6 @@ +--- icecat-60.2.0/storage/moz.build.orig 2018-09-13 17:51:11.000000000 -0400 ++++ icecat-60.2.0/storage/moz.build 2018-09-22 04:26:50.659564554 -0400 +@@ -117,7 +117,6 @@ DEFINES['MOZ_MEMORY_TEMP_STORE_PRAGMA'] = True LOCAL_INCLUDES += [ @@ -23,13 +23,27 @@ Fixes needed when avoiding bundled libraries. '/dom/base', ] ---- icecat-52.0.2/dom/indexedDB/moz.build.orig -+++ icecat-52.0.2/dom/indexedDB/moz.build -@@ -101,7 +101,6 @@ +--- icecat-60.2.0/dom/indexedDB/moz.build.orig 2018-09-13 17:49:42.000000000 -0400 ++++ icecat-60.2.0/dom/indexedDB/moz.build 2018-09-22 04:26:50.663564574 -0400 +@@ -102,7 +102,6 @@ CXXFLAGS += ['-Wno-error=shadow'] LOCAL_INCLUDES += [ - '/db/sqlite3/src', '/dom/base', '/dom/storage', - '/dom/workers', + '/ipc/glue', +--- icecat-60.2.0/media/webrtc/trunk/webrtc/base/rtc_task_queue_gn/moz.build.orig 2018-09-13 17:40:54.000000000 -0400 ++++ icecat-60.2.0/media/webrtc/trunk/webrtc/base/rtc_task_queue_gn/moz.build 2018-09-23 21:33:12.319975105 -0400 +@@ -130,11 +130,6 @@ + DEFINES["WEBRTC_POSIX"] = True + DEFINES["_FILE_OFFSET_BITS"] = "64" + +- LOCAL_INCLUDES += [ +- "/ipc/chromium/src/third_party/libevent/include/", +- "/ipc/chromium/src/third_party/libevent/linux/" +- ] +- + UNIFIED_SOURCES += [ + "/media/webrtc/trunk/webrtc/base/task_queue_libevent.cc", + "/media/webrtc/trunk/webrtc/base/task_queue_posix.cc" diff --git a/gnu/packages/patches/icecat-bug-1413868-pt1.patch b/gnu/packages/patches/icecat-bug-1413868-pt1.patch deleted file mode 100644 index 18382dc33a..0000000000 --- a/gnu/packages/patches/icecat-bug-1413868-pt1.patch +++ /dev/null @@ -1,663 +0,0 @@ -Based on <https://hg.mozilla.org/releases/mozilla-esr52/rev/431fa5dd4016> -Adapted to apply cleanly to GNU IceCat. - -# HG changeset patch -# User Honza Bambas <honzab.moz@firemni.cz> -# Date 1528830658 14400 -# Node ID 431fa5dd4016bdab7e4bb0d3c4df85468fe337b0 -# Parent e8e9e1ef79f2a18c61ec1b87cfb214c8d4960f8e -Bug 1413868. r=valentin, a=RyanVM - -diff --git a/toolkit/xre/nsAppRunner.cpp b/toolkit/xre/nsAppRunner.cpp ---- a/toolkit/xre/nsAppRunner.cpp -+++ b/toolkit/xre/nsAppRunner.cpp -@@ -4,16 +4,17 @@ - * file, You can obtain one at http://mozilla.org/MPL/2.0/. */ - - #include "mozilla/dom/ContentParent.h" - #include "mozilla/dom/ContentChild.h" - #include "mozilla/ipc/GeckoChildProcessHost.h" - - #include "mozilla/ArrayUtils.h" - #include "mozilla/Attributes.h" -+#include "mozilla/FilePreferences.h" - #include "mozilla/ChaosMode.h" - #include "mozilla/IOInterposer.h" - #include "mozilla/Likely.h" - #include "mozilla/MemoryChecking.h" - #include "mozilla/Poison.h" - #include "mozilla/Preferences.h" - #include "mozilla/ScopeExit.h" - #include "mozilla/Services.h" -@@ -4304,16 +4305,20 @@ XREMain::XRE_mainRun() - // Need to write out the fact that the profile has been removed and potentially - // that the selected/default profile changed. - mProfileSvc->Flush(); - } - } - - mDirProvider.DoStartup(); - -+ // As FilePreferences need the profile directory, we must initialize right here. -+ mozilla::FilePreferences::InitDirectoriesWhitelist(); -+ mozilla::FilePreferences::InitPrefs(); -+ - OverrideDefaultLocaleIfNeeded(); - - #ifdef MOZ_CRASHREPORTER - nsCString userAgentLocale; - // Try a localized string first. This pref is always a localized string in - // IceCatMobile, and might be elsewhere, too. - if (NS_SUCCEEDED(Preferences::GetLocalizedCString("general.useragent.locale", &userAgentLocale))) { - CrashReporter::AnnotateCrashReport(NS_LITERAL_CSTRING("useragent_locale"), userAgentLocale); -diff --git a/toolkit/xre/nsEmbedFunctions.cpp b/toolkit/xre/nsEmbedFunctions.cpp ---- a/toolkit/xre/nsEmbedFunctions.cpp -+++ b/toolkit/xre/nsEmbedFunctions.cpp -@@ -46,16 +46,17 @@ - #include "nsX11ErrorHandler.h" - #include "nsGDKErrorHandler.h" - #include "base/at_exit.h" - #include "base/command_line.h" - #include "base/message_loop.h" - #include "base/process_util.h" - #include "chrome/common/child_process.h" - -+#include "mozilla/FilePreferences.h" - #include "mozilla/ipc/BrowserProcessSubThread.h" - #include "mozilla/ipc/GeckoChildProcessHost.h" - #include "mozilla/ipc/IOThreadChild.h" - #include "mozilla/ipc/ProcessChild.h" - #include "ScopedXREEmbed.h" - - #include "mozilla/plugins/PluginProcessChild.h" - #include "mozilla/dom/ContentProcess.h" -@@ -680,16 +681,18 @@ XRE_InitChildProcess(int aArgc, - ::SetProcessShutdownParameters(0x280 - 1, SHUTDOWN_NORETRY); - #endif - - #if defined(MOZ_SANDBOX) && defined(XP_WIN) - // We need to do this after the process has been initialised, as - // InitLoggingIfRequired may need access to prefs. - mozilla::sandboxing::InitLoggingIfRequired(aChildData->ProvideLogFunction); - #endif -+ mozilla::FilePreferences::InitDirectoriesWhitelist(); -+ mozilla::FilePreferences::InitPrefs(); - - OverrideDefaultLocaleIfNeeded(); - - #if defined(MOZ_CRASHREPORTER) - #if defined(MOZ_CONTENT_SANDBOX) && !defined(MOZ_WIDGET_GONK) - AddContentSandboxLevelAnnotation(); - #endif - #endif -diff --git a/xpcom/io/FilePreferences.cpp b/xpcom/io/FilePreferences.cpp -new file mode 100644 ---- /dev/null -+++ b/xpcom/io/FilePreferences.cpp -@@ -0,0 +1,271 @@ -+/* -*- Mode: C++; tab-width: 8; indent-tabs-mode: nil; c-basic-offset: 2 -*- */ -+/* vim: set ts=8 sts=2 et sw=2 tw=80: */ -+/* This Source Code Form is subject to the terms of the Mozilla Public -+* License, v. 2.0. If a copy of the MPL was not distributed with this -+* file, You can obtain one at http://mozilla.org/MPL/2.0/. */ -+ -+#include "FilePreferences.h" -+ -+#include "mozilla/Preferences.h" -+#include "nsAppDirectoryServiceDefs.h" -+#include "nsDirectoryServiceDefs.h" -+#include "nsDirectoryServiceUtils.h" -+ -+namespace mozilla { -+namespace FilePreferences { -+ -+static bool sBlockUNCPaths = false; -+typedef nsTArray<nsString> Paths; -+ -+static Paths& PathArray() -+{ -+ static Paths sPaths; -+ return sPaths; -+} -+ -+static void AllowDirectory(char const* directory) -+{ -+ nsCOMPtr<nsIFile> file; -+ NS_GetSpecialDirectory(directory, getter_AddRefs(file)); -+ if (!file) { -+ return; -+ } -+ -+ nsString path; -+ if (NS_FAILED(file->GetTarget(path))) { -+ return; -+ } -+ -+ // The whitelist makes sense only for UNC paths, because this code is used -+ // to block only UNC paths, hence, no need to add non-UNC directories here -+ // as those would never pass the check. -+ if (!StringBeginsWith(path, NS_LITERAL_STRING("\\\\"))) { -+ return; -+ } -+ -+ if (!PathArray().Contains(path)) { -+ PathArray().AppendElement(path); -+ } -+} -+ -+void InitPrefs() -+{ -+ sBlockUNCPaths = Preferences::GetBool("network.file.disable_unc_paths", false); -+} -+ -+void InitDirectoriesWhitelist() -+{ -+ // NS_GRE_DIR is the installation path where the binary resides. -+ AllowDirectory(NS_GRE_DIR); -+ // NS_APP_USER_PROFILE_50_DIR and NS_APP_USER_PROFILE_LOCAL_50_DIR are the two -+ // parts of the profile we store permanent and local-specific data. -+ AllowDirectory(NS_APP_USER_PROFILE_50_DIR); -+ AllowDirectory(NS_APP_USER_PROFILE_LOCAL_50_DIR); -+} -+ -+namespace { // anon -+ -+class Normalizer -+{ -+public: -+ Normalizer(const nsAString& aFilePath, const char16_t aSeparator); -+ bool Get(nsAString& aNormalizedFilePath); -+ -+private: -+ bool ConsumeItem(); -+ bool ConsumeSeparator(); -+ bool IsEOF() { return mFilePathCursor == mFilePathEnd; } -+ -+ bool ConsumeName(); -+ bool CheckParentDir(); -+ bool CheckCurrentDir(); -+ -+ nsString::const_char_iterator mFilePathCursor; -+ nsString::const_char_iterator mFilePathEnd; -+ -+ nsDependentSubstring mItem; -+ char16_t const mSeparator; -+ nsTArray<nsDependentSubstring> mStack; -+}; -+ -+Normalizer::Normalizer(const nsAString& aFilePath, const char16_t aSeparator) -+ : mFilePathCursor(aFilePath.BeginReading()) -+ , mFilePathEnd(aFilePath.EndReading()) -+ , mSeparator(aSeparator) -+{ -+} -+ -+bool Normalizer::ConsumeItem() -+{ -+ if (IsEOF()) { -+ return false; -+ } -+ -+ nsString::const_char_iterator nameBegin = mFilePathCursor; -+ while (mFilePathCursor != mFilePathEnd) { -+ if (*mFilePathCursor == mSeparator) { -+ break; // don't include the separator -+ } -+ ++mFilePathCursor; -+ } -+ -+ mItem.Rebind(nameBegin, mFilePathCursor); -+ return true; -+} -+ -+bool Normalizer::ConsumeSeparator() -+{ -+ if (IsEOF()) { -+ return false; -+ } -+ -+ if (*mFilePathCursor != mSeparator) { -+ return false; -+ } -+ -+ ++mFilePathCursor; -+ return true; -+} -+ -+bool Normalizer::Get(nsAString& aNormalizedFilePath) -+{ -+ aNormalizedFilePath.Truncate(); -+ -+ if (IsEOF()) { -+ return true; -+ } -+ if (ConsumeSeparator()) { -+ aNormalizedFilePath.Append(mSeparator); -+ } -+ -+ if (IsEOF()) { -+ return true; -+ } -+ if (ConsumeSeparator()) { -+ aNormalizedFilePath.Append(mSeparator); -+ } -+ -+ while (!IsEOF()) { -+ if (!ConsumeName()) { -+ return false; -+ } -+ } -+ -+ for (auto const& name : mStack) { -+ aNormalizedFilePath.Append(name); -+ } -+ -+ return true; -+} -+ -+bool Normalizer::ConsumeName() -+{ -+ if (!ConsumeItem()) { -+ return true; -+ } -+ -+ if (CheckCurrentDir()) { -+ return true; -+ } -+ -+ if (CheckParentDir()) { -+ if (!mStack.Length()) { -+ // This means there are more \.. than valid names -+ return false; -+ } -+ -+ mStack.RemoveElementAt(mStack.Length() - 1); -+ return true; -+ } -+ -+ if (mItem.IsEmpty()) { -+ // this means an empty name (a lone slash), which is illegal -+ return false; -+ } -+ -+ if (ConsumeSeparator()) { -+ mItem.Rebind(mItem.BeginReading(), mFilePathCursor); -+ } -+ mStack.AppendElement(mItem); -+ -+ return true; -+} -+ -+bool Normalizer::CheckCurrentDir() -+{ -+ if (mItem == NS_LITERAL_STRING(".")) { -+ ConsumeSeparator(); -+ // EOF is acceptable -+ return true; -+ } -+ -+ return false; -+} -+ -+bool Normalizer::CheckParentDir() -+{ -+ if (mItem == NS_LITERAL_STRING("..")) { -+ ConsumeSeparator(); -+ // EOF is acceptable -+ return true; -+ } -+ -+ return false; -+} -+ -+} // anon -+ -+bool IsBlockedUNCPath(const nsAString& aFilePath) -+{ -+ if (!sBlockUNCPaths) { -+ return false; -+ } -+ -+ if (!StringBeginsWith(aFilePath, NS_LITERAL_STRING("\\\\"))) { -+ return false; -+ } -+ -+ nsAutoString normalized; -+ if (!Normalizer(aFilePath, L'\\').Get(normalized)) { -+ // Broken paths are considered invalid and thus inaccessible -+ return true; -+ } -+ -+ for (const auto& allowedPrefix : PathArray()) { -+ if (StringBeginsWith(normalized, allowedPrefix)) { -+ if (normalized.Length() == allowedPrefix.Length()) { -+ return false; -+ } -+ if (normalized[allowedPrefix.Length()] == L'\\') { -+ return false; -+ } -+ -+ // When we are here, the path has a form "\\path\prefixevil" -+ // while we have an allowed prefix of "\\path\prefix". -+ // Note that we don't want to add a slash to the end of a prefix -+ // so that opening the directory (no slash at the end) still works. -+ break; -+ } -+ } -+ -+ return true; -+} -+ -+void testing::SetBlockUNCPaths(bool aBlock) -+{ -+ sBlockUNCPaths = aBlock; -+} -+ -+void testing::AddDirectoryToWhitelist(nsAString const & aPath) -+{ -+ PathArray().AppendElement(aPath); -+} -+ -+bool testing::NormalizePath(nsAString const & aPath, nsAString & aNormalized) -+{ -+ Normalizer normalizer(aPath, L'\\'); -+ return normalizer.Get(aNormalized); -+} -+ -+} // ::FilePreferences -+} // ::mozilla -diff --git a/xpcom/io/FilePreferences.h b/xpcom/io/FilePreferences.h -new file mode 100644 ---- /dev/null -+++ b/xpcom/io/FilePreferences.h -@@ -0,0 +1,25 @@ -+/* -*- Mode: C++; tab-width: 8; indent-tabs-mode: nil; c-basic-offset: 2 -*- */ -+/* vim: set ts=8 sts=2 et sw=2 tw=80: */ -+/* This Source Code Form is subject to the terms of the Mozilla Public -+* License, v. 2.0. If a copy of the MPL was not distributed with this -+* file, You can obtain one at http://mozilla.org/MPL/2.0/. */ -+ -+#include "nsIObserver.h" -+ -+namespace mozilla { -+namespace FilePreferences { -+ -+void InitPrefs(); -+void InitDirectoriesWhitelist(); -+bool IsBlockedUNCPath(const nsAString& aFilePath); -+ -+namespace testing { -+ -+void SetBlockUNCPaths(bool aBlock); -+void AddDirectoryToWhitelist(nsAString const& aPath); -+bool NormalizePath(nsAString const & aPath, nsAString & aNormalized); -+ -+} -+ -+} // FilePreferences -+} // mozilla -diff --git a/xpcom/io/moz.build b/xpcom/io/moz.build ---- a/xpcom/io/moz.build -+++ b/xpcom/io/moz.build -@@ -79,24 +79,26 @@ EXPORTS += [ - 'nsUnicharInputStream.h', - 'nsWildCard.h', - 'SlicedInputStream.h', - 'SpecialSystemDirectory.h', - ] - - EXPORTS.mozilla += [ - 'Base64.h', -+ 'FilePreferences.h', - 'SnappyCompressOutputStream.h', - 'SnappyFrameUtils.h', - 'SnappyUncompressInputStream.h', - ] - - UNIFIED_SOURCES += [ - 'Base64.cpp', - 'crc32c.c', -+ 'FilePreferences.cpp', - 'nsAnonymousTemporaryFile.cpp', - 'nsAppFileLocationProvider.cpp', - 'nsBinaryStream.cpp', - 'nsDirectoryService.cpp', - 'nsEscape.cpp', - 'nsInputStreamTee.cpp', - 'nsIOUtil.cpp', - 'nsLinebreakConverter.cpp', -diff --git a/xpcom/io/nsLocalFileWin.cpp b/xpcom/io/nsLocalFileWin.cpp ---- a/xpcom/io/nsLocalFileWin.cpp -+++ b/xpcom/io/nsLocalFileWin.cpp -@@ -41,16 +41,17 @@ - #include <stdio.h> - #include <stdlib.h> - #include <mbstring.h> - - #include "nsXPIDLString.h" - #include "prproces.h" - #include "prlink.h" - -+#include "mozilla/FilePreferences.h" - #include "mozilla/Mutex.h" - #include "SpecialSystemDirectory.h" - - #include "nsTraceRefcnt.h" - #include "nsXPCOMCIDInternal.h" - #include "nsThreadUtils.h" - #include "nsXULAppAPI.h" - -@@ -1162,16 +1163,20 @@ nsLocalFile::InitWithPath(const nsAStrin - char16_t secondChar = *(++begin); - - // just do a sanity check. if it has any forward slashes, it is not a Native path - // on windows. Also, it must have a colon at after the first char. - if (FindCharInReadable(L'/', begin, end)) { - return NS_ERROR_FILE_UNRECOGNIZED_PATH; - } - -+ if (FilePreferences::IsBlockedUNCPath(aFilePath)) { -+ return NS_ERROR_FILE_ACCESS_DENIED; -+ } -+ - if (secondChar != L':' && (secondChar != L'\\' || firstChar != L'\\')) { - return NS_ERROR_FILE_UNRECOGNIZED_PATH; - } - - if (secondChar == L':') { - // Make sure we have a valid drive, later code assumes the drive letter - // is a single char a-z or A-Z. - if (PathGetDriveNumberW(aFilePath.Data()) == -1) { -@@ -1974,16 +1979,20 @@ nsLocalFile::CopySingleFile(nsIFile* aSo - bool path1Remote, path2Remote; - if (!IsRemoteFilePath(filePath.get(), path1Remote) || - !IsRemoteFilePath(destPath.get(), path2Remote) || - path1Remote || path2Remote) { - dwCopyFlags |= COPY_FILE_NO_BUFFERING; - } - } - -+ if (FilePreferences::IsBlockedUNCPath(destPath)) { -+ return NS_ERROR_FILE_ACCESS_DENIED; -+ } -+ - if (!move) { - copyOK = ::CopyFileExW(filePath.get(), destPath.get(), nullptr, - nullptr, nullptr, dwCopyFlags); - } else { - copyOK = ::MoveFileExW(filePath.get(), destPath.get(), - MOVEFILE_REPLACE_EXISTING); - - // Check if copying the source file to a different volume, -diff --git a/xpcom/tests/gtest/TestFilePreferencesWin.cpp b/xpcom/tests/gtest/TestFilePreferencesWin.cpp -new file mode 100644 ---- /dev/null -+++ b/xpcom/tests/gtest/TestFilePreferencesWin.cpp -@@ -0,0 +1,141 @@ -+#include "gtest/gtest.h" -+ -+#include "mozilla/FilePreferences.h" -+#include "nsIFile.h" -+#include "nsXPCOMCID.h" -+ -+TEST(FilePreferencesWin, Normalization) -+{ -+ nsAutoString normalized; -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("foo"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("foo")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\foo"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\foo")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\foo")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("foo\\some"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("foo\\some")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\.\\foo"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\foo")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\."), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\.\\"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\.\\."), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\bar"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\foo\\bar")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\bar\\"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\foo\\bar\\")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\bar\\."), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\foo\\bar\\")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\bar\\.\\"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\foo\\bar\\")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\bar\\..\\"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\foo\\")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\bar\\.."), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\foo\\")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\..\\bar\\..\\"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\..\\bar"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\bar")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\bar\\..\\..\\"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\")); -+ -+ mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\bar\\.\\..\\.\\..\\"), normalized); -+ ASSERT_TRUE(normalized == NS_LITERAL_STRING("\\\\")); -+ -+ bool result; -+ -+ result = mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\.."), normalized); -+ ASSERT_FALSE(result); -+ -+ result = mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\..\\"), normalized); -+ ASSERT_FALSE(result); -+ -+ result = mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\.\\..\\"), normalized); -+ ASSERT_FALSE(result); -+ -+ result = mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\\\bar"), normalized); -+ ASSERT_FALSE(result); -+ -+ result = mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\foo\\bar\\..\\..\\..\\..\\"), normalized); -+ ASSERT_FALSE(result); -+ -+ result = mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\\\"), normalized); -+ ASSERT_FALSE(result); -+ -+ result = mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\.\\\\"), normalized); -+ ASSERT_FALSE(result); -+ -+ result = mozilla::FilePreferences::testing::NormalizePath( -+ NS_LITERAL_STRING("\\\\..\\\\"), normalized); -+ ASSERT_FALSE(result); -+} -+ -+TEST(FilePreferencesWin, AccessUNC) -+{ -+ nsCOMPtr<nsIFile> lf = do_CreateInstance(NS_LOCAL_FILE_CONTRACTID); -+ -+ nsresult rv; -+ -+ mozilla::FilePreferences::testing::SetBlockUNCPaths(false); -+ -+ rv = lf->InitWithPath(NS_LITERAL_STRING("\\\\nice\\..\\evil\\share")); -+ ASSERT_EQ(rv, NS_OK); -+ -+ mozilla::FilePreferences::testing::SetBlockUNCPaths(true); -+ -+ rv = lf->InitWithPath(NS_LITERAL_STRING("\\\\nice\\..\\evil\\share")); -+ ASSERT_EQ(rv, NS_ERROR_FILE_ACCESS_DENIED); -+ -+ mozilla::FilePreferences::testing::AddDirectoryToWhitelist(NS_LITERAL_STRING("\\\\nice")); -+ -+ rv = lf->InitWithPath(NS_LITERAL_STRING("\\\\nice\\share")); -+ ASSERT_EQ(rv, NS_OK); -+ -+ rv = lf->InitWithPath(NS_LITERAL_STRING("\\\\nice\\..\\evil\\share")); -+ ASSERT_EQ(rv, NS_ERROR_FILE_ACCESS_DENIED); -+} -diff --git a/xpcom/tests/gtest/moz.build b/xpcom/tests/gtest/moz.build ---- a/xpcom/tests/gtest/moz.build -+++ b/xpcom/tests/gtest/moz.build -@@ -51,16 +51,21 @@ UNIFIED_SOURCES += [ - if CONFIG['MOZ_DEBUG'] and CONFIG['OS_ARCH'] not in ('WINNT') and CONFIG['OS_TARGET'] != 'Android': - # FIXME bug 523392: TestDeadlockDetector doesn't like Windows - # Bug 1054249: Doesn't work on Android - UNIFIED_SOURCES += [ - 'TestDeadlockDetector.cpp', - 'TestDeadlockDetectorScalability.cpp', - ] - -+if CONFIG['OS_TARGET'] == 'WINNT': -+ UNIFIED_SOURCES += [ -+ 'TestFilePreferencesWin.cpp', -+ ] -+ - if CONFIG['WRAP_STL_INCLUDES'] and not CONFIG['CLANG_CL']: - UNIFIED_SOURCES += [ - 'TestSTLWrappers.cpp', - ] - - # Compile TestAllocReplacement separately so Windows headers don't pollute - # the global namespace for other files. - SOURCES += [ - diff --git a/gnu/packages/patches/icecat-use-system-graphite2+harfbuzz.patch b/gnu/packages/patches/icecat-use-system-graphite2+harfbuzz.patch new file mode 100644 index 0000000000..94c211b797 --- /dev/null +++ b/gnu/packages/patches/icecat-use-system-graphite2+harfbuzz.patch @@ -0,0 +1,226 @@ +Allow building against system-wide graphite2/harfbuzz. +See <https://bugzilla.mozilla.org/show_bug.cgi?id=847568> +Based on: + https://svnweb.freebsd.org/ports/head/www/firefox-esr/files/patch-bug847568?revision=472833&view=co +Modified for use with patch -p1, and to apply cleanly to GNU IceCat. + +--- icecat-60.2.0/config/system-headers.mozbuild ++++ icecat-60.2.0/config/system-headers.mozbuild +@@ -1311,6 +1311,19 @@ + 'pixman.h', + ] + ++if CONFIG['MOZ_SYSTEM_GRAPHITE2']: ++ system_headers += [ ++ 'graphite2/Font.h', ++ 'graphite2/Segment.h', ++ ] ++ ++if CONFIG['MOZ_SYSTEM_HARFBUZZ']: ++ system_headers += [ ++ 'harfbuzz/hb-glib.h', ++ 'harfbuzz/hb-ot.h', ++ 'harfbuzz/hb.h', ++ ] ++ + if CONFIG['MOZ_SYSTEM_LIBVPX']: + system_headers += [ + 'vpx_mem/vpx_mem.h', +--- icecat-60.2.0/dom/base/moz.build ++++ icecat-60.2.0/dom/base/moz.build +@@ -474,6 +474,9 @@ + if CONFIG['MOZ_X11']: + CXXFLAGS += CONFIG['TK_CFLAGS'] + ++if CONFIG['MOZ_SYSTEM_HARFBUZZ']: ++ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] ++ + GENERATED_FILES += [ + 'PropertyUseCounterMap.inc', + 'UseCounterList.h', +--- icecat-60.2.0/gfx/graphite2/moz-gr-update.sh ++++ icecat-60.2.0/gfx/graphite2/moz-gr-update.sh +@@ -1,6 +1,7 @@ + #!/bin/bash + + # Script used to update the Graphite2 library in the mozilla source tree ++# and bump version for --with-system-graphite2 + + # This script lives in gfx/graphite2, along with the library source, + # but must be run from the top level of the mozilla-central tree. +@@ -37,12 +38,16 @@ echo "See" $0 "for update procedure." >> gfx/graphite2/README.mozilla + #find gfx/graphite2/ -name "*.cpp" -exec perl -p -i -e "s/<cstdio>/<stdio.h>/;s/Windows.h/windows.h/;" {} \; + #find gfx/graphite2/ -name "*.h" -exec perl -p -i -e "s/<cstdio>/<stdio.h>/;s/Windows.h/windows.h/;" {} \; + ++# chase version for --with-system-graphite2 ++perl -p -i -e "s/[0-9]+\,[0-9]+\,[0-9]+/$RELEASE/ and tr/./,/ \ ++ if /GR2_VERSION_REQUIRE/" old-configure.in ++ + # summarize what's been touched + echo Updated to $RELEASE. + echo Here is what changed in the gfx/graphite2 directory: + echo + +-hg stat gfx/graphite2 ++hg stat old-configure.in gfx/graphite2 + + echo + echo If gfx/graphite2/src/files.mk has changed, please make corresponding +--- icecat-60.2.0/gfx/moz.build ++++ icecat-60.2.0/gfx/moz.build +@@ -10,6 +10,12 @@ with Files('**'): + if CONFIG['MOZ_TREE_CAIRO']: + DIRS += ['cairo'] + ++if not CONFIG['MOZ_SYSTEM_GRAPHITE2']: ++ DIRS += ['graphite2/src' ] ++ ++if not CONFIG['MOZ_SYSTEM_HARFBUZZ']: ++ DIRS += ['harfbuzz/src'] ++ + DIRS += [ + '2d', + 'ycbcr', +@@ -18,8 +24,6 @@ DIRS += [ + 'qcms', + 'gl', + 'layers', +- 'graphite2/src', +- 'harfbuzz/src', + 'ots/src', + 'thebes', + 'ipc', +--- icecat-60.2.0/gfx/skia/generate_mozbuild.py ++++ icecat-60.2.0/gfx/skia/generate_mozbuild.py +@@ -148,6 +148,9 @@ + '-Wno-unused-private-field', + ] + ++if CONFIG['MOZ_SYSTEM_HARFBUZZ']: ++ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] ++ + if CONFIG['MOZ_WIDGET_TOOLKIT'] in ('gtk3', 'android'): + CXXFLAGS += CONFIG['MOZ_CAIRO_CFLAGS'] + CXXFLAGS += CONFIG['CAIRO_FT_CFLAGS'] +--- icecat-60.2.0/gfx/skia/moz.build ++++ icecat-60.2.0/gfx/skia/moz.build +@@ -822,6 +822,9 @@ + '-Wno-unused-private-field', + ] + ++if CONFIG['MOZ_SYSTEM_HARFBUZZ']: ++ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] ++ + if CONFIG['MOZ_WIDGET_TOOLKIT'] in ('gtk3', 'android'): + CXXFLAGS += CONFIG['MOZ_CAIRO_CFLAGS'] + CXXFLAGS += CONFIG['CAIRO_FT_CFLAGS'] +--- icecat-60.2.0/gfx/thebes/moz.build ++++ icecat-60.2.0/gfx/thebes/moz.build +@@ -272,7 +272,13 @@ + + LOCAL_INCLUDES += CONFIG['SKIA_INCLUDES'] + +-DEFINES['GRAPHITE2_STATIC'] = True ++if CONFIG['MOZ_SYSTEM_GRAPHITE2']: ++ CXXFLAGS += CONFIG['MOZ_GRAPHITE2_CFLAGS'] ++else: ++ DEFINES['GRAPHITE2_STATIC'] = True ++ ++if CONFIG['MOZ_SYSTEM_HARFBUZZ']: ++ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] + + if CONFIG['CC_TYPE'] == 'clang': + # Suppress warnings from Skia header files. +--- icecat-60.2.0/intl/unicharutil/util/moz.build ++++ icecat-60.2.0/intl/unicharutil/util/moz.build +@@ -25,4 +25,7 @@ UNIFIED_SOURCES += [ + 'nsUnicodeProperties.cpp', + ] + ++if CONFIG['MOZ_SYSTEM_HARFBUZZ']: ++ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] ++ + FINAL_LIBRARY = 'xul' +--- icecat-60.2.0/netwerk/dns/moz.build ++++ icecat-60.2.0/netwerk/dns/moz.build +@@ -76,3 +76,6 @@ + + if CONFIG['CC_TYPE'] in ('clang', 'gcc'): + CXXFLAGS += ['-Wno-error=shadow'] ++ ++if CONFIG['MOZ_SYSTEM_HARFBUZZ']: ++ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] +--- icecat-60.2.0/old-configure.in ++++ icecat-60.2.0/old-configure.in +@@ -3995,6 +3995,27 @@ + AC_SUBST(MOZ_LINUX_32_SSE2_STARTUP_ERROR) + + dnl ======================================================== ++dnl Check for graphite2 ++dnl ======================================================== ++if test -n "$MOZ_SYSTEM_GRAPHITE2"; then ++ dnl graphite2.pc has bogus version, check manually ++ _SAVE_CFLAGS=$CFLAGS ++ CFLAGS="$CFLAGS $MOZ_GRAPHITE2_CFLAGS" ++ AC_TRY_COMPILE([ #include <graphite2/Font.h> ++ #define GR2_VERSION_REQUIRE(major,minor,bugfix) \ ++ ( GR2_VERSION_MAJOR * 10000 + GR2_VERSION_MINOR \ ++ * 100 + GR2_VERSION_BUGFIX >= \ ++ (major) * 10000 + (minor) * 100 + (bugfix) ) ++ ], [ ++ #if !GR2_VERSION_REQUIRE(1,3,10) ++ #error "Insufficient graphite2 version." ++ #endif ++ ], [], ++ [AC_MSG_ERROR([--with-system-graphite2 requested but no working libgraphite2 found])]) ++ CFLAGS=$_SAVE_CFLAGS ++fi ++ ++dnl ======================================================== + dnl Check for pixman and cairo + dnl ======================================================== + +--- icecat-60.2.0/toolkit/library/moz.build ++++ icecat-60.2.0/toolkit/library/moz.build +@@ -235,6 +235,12 @@ + if CONFIG['MOZ_SYSTEM_PNG']: + OS_LIBS += CONFIG['MOZ_PNG_LIBS'] + ++if CONFIG['MOZ_SYSTEM_GRAPHITE2']: ++ OS_LIBS += CONFIG['MOZ_GRAPHITE2_LIBS'] ++ ++if CONFIG['MOZ_SYSTEM_HARFBUZZ']: ++ OS_LIBS += CONFIG['MOZ_HARFBUZZ_LIBS'] ++ + if CONFIG['MOZ_SYSTEM_HUNSPELL']: + OS_LIBS += CONFIG['MOZ_HUNSPELL_LIBS'] + +--- icecat-60.2.0/toolkit/moz.configure ++++ icecat-60.2.0/toolkit/moz.configure +@@ -1051,6 +1051,26 @@ + add_old_configure_assignment('FT2_CFLAGS', + ft2_info.cflags) + ++# Graphite2 ++# ============================================================== ++option('--with-system-graphite2', ++ help="Use system graphite2 (located with pkgconfig)") ++ ++system_graphite2 = pkg_check_modules('MOZ_GRAPHITE2', 'graphite2', ++ when='--with-system-graphite2') ++ ++set_config('MOZ_SYSTEM_GRAPHITE2', depends_if(system_graphite2)(lambda _: True)) ++ ++# HarfBuzz ++# ============================================================== ++option('--with-system-harfbuzz', ++ help="Use system harfbuzz (located with pkgconfig)") ++ ++system_harfbuzz = pkg_check_modules('MOZ_HARFBUZZ', 'harfbuzz >= 1.7.4', ++ when='--with-system-harfbuzz') ++ ++set_config('MOZ_SYSTEM_HARFBUZZ', depends_if(system_harfbuzz)(lambda _: True)) ++ + # Mortar + # ============================================================== + option('--enable-mortar', help='Enable mortar extension') diff --git a/gnu/packages/patches/icecat-use-system-graphite2.patch b/gnu/packages/patches/icecat-use-system-graphite2.patch deleted file mode 100644 index 188fba2bc9..0000000000 --- a/gnu/packages/patches/icecat-use-system-graphite2.patch +++ /dev/null @@ -1,248 +0,0 @@ -Copied from <https://reviewboard.mozilla.org/r/90218/diff/4> -See <https://bugzilla.mozilla.org/show_bug.cgi?id=847568> - -diff --git a/config/Makefile.in b/config/Makefile.in ---- a/config/Makefile.in -+++ b/config/Makefile.in -@@ -36,16 +36,17 @@ ifdef WRAP_SYSTEM_INCLUDES - export-preqs = \ - $(call mkdir_deps,system_wrappers) \ - $(NULL) - - export:: $(export-preqs) - $(PYTHON) -m mozbuild.action.preprocessor $(DEFINES) $(ACDEFINES) \ - -DMOZ_TREE_CAIRO=$(MOZ_TREE_CAIRO) \ - -DMOZ_TREE_PIXMAN=$(MOZ_TREE_PIXMAN) \ -+ -DMOZ_SYSTEM_GRAPHITE2=$(MOZ_SYSTEM_GRAPHITE2) \ - -DMOZ_SYSTEM_HARFBUZZ=$(MOZ_SYSTEM_HARFBUZZ) \ - -DMOZ_SYSTEM_HUNSPELL=$(MOZ_SYSTEM_HUNSPELL) \ - -DMOZ_SYSTEM_BZ2=$(MOZ_SYSTEM_BZ2) \ - -DMOZ_SYSTEM_ZLIB=$(MOZ_SYSTEM_ZLIB) \ - -DMOZ_SYSTEM_PNG=$(MOZ_SYSTEM_PNG) \ - -DMOZ_SYSTEM_JPEG=$(MOZ_SYSTEM_JPEG) \ - -DMOZ_SYSTEM_LIBEVENT=$(MOZ_SYSTEM_LIBEVENT) \ - -DMOZ_SYSTEM_LIBVPX=$(MOZ_SYSTEM_LIBVPX) \ -diff --git a/config/system-headers b/config/system-headers ---- a/config/system-headers -+++ b/config/system-headers -@@ -1260,16 +1260,20 @@ zlib.h - #ifdef MOZ_ENABLE_STARTUP_NOTIFICATION - libsn/sn.h - libsn/sn-common.h - libsn/sn-launchee.h - libsn/sn-launcher.h - libsn/sn-monitor.h - libsn/sn-util.h - #endif -+#if MOZ_SYSTEM_GRAPHITE2==1 -+graphite2/Font.h -+graphite2/Segment.h -+#endif - #if MOZ_SYSTEM_HARFBUZZ==1 - harfbuzz/hb-glib.h - harfbuzz/hb-ot.h - harfbuzz/hb.h - #endif - #if MOZ_SYSTEM_HUNSPELL==1 - hunspell.hxx - #endif -diff --git a/gfx/graphite2/moz-gr-update.sh b/gfx/graphite2/moz-gr-update.sh ---- a/gfx/graphite2/moz-gr-update.sh -+++ b/gfx/graphite2/moz-gr-update.sh -@@ -1,11 +1,12 @@ - #!/bin/bash - - # Script used to update the Graphite2 library in the mozilla source tree -+# and bump version for --with-system-graphite2 - - # This script lives in gfx/graphite2, along with the library source, - # but must be run from the top level of the mozilla-central tree. - - # Run as - # - # ./gfx/graphite2/moz-gr-update.sh RELEASE - # -@@ -32,22 +33,26 @@ echo "This directory contains the Graphi - echo "$TARBALL" >> gfx/graphite2/README.mozilla - echo "" - echo "See" $0 "for update procedure." >> gfx/graphite2/README.mozilla - - # fix up includes because of bug 721839 (cstdio) and bug 803066 (Windows.h) - #find gfx/graphite2/ -name "*.cpp" -exec perl -p -i -e "s/<cstdio>/<stdio.h>/;s/Windows.h/windows.h/;" {} \; - #find gfx/graphite2/ -name "*.h" -exec perl -p -i -e "s/<cstdio>/<stdio.h>/;s/Windows.h/windows.h/;" {} \; - -+# chase version for --with-system-graphite2 -+perl -p -i -e "s/[0-9]+\,[0-9]+\,[0-9]+/$RELEASE/ and tr/./,/ \ -+ if /GR2_VERSION_REQUIRE/" old-configure.in -+ - # summarize what's been touched - echo Updated to $RELEASE. - echo Here is what changed in the gfx/graphite2 directory: - echo - --hg stat gfx/graphite2 -+hg stat old-configure.in gfx/graphite2 - - echo - echo If gfx/graphite2/src/files.mk has changed, please make corresponding - echo changes to gfx/graphite2/src/moz.build - echo - - echo - echo Now use hg commands to create a patch for the mozilla tree. -diff --git a/gfx/moz.build b/gfx/moz.build ---- a/gfx/moz.build -+++ b/gfx/moz.build -@@ -2,28 +2,30 @@ - # vim: set filetype=python: - # This Source Code Form is subject to the terms of the Mozilla Public - # License, v. 2.0. If a copy of the MPL was not distributed with this - # file, You can obtain one at http://mozilla.org/MPL/2.0/. - - if CONFIG['MOZ_TREE_CAIRO']: - DIRS += ['cairo'] - -+if not CONFIG['MOZ_SYSTEM_GRAPHITE2']: -+ DIRS += ['graphite2/src' ] -+ - if not CONFIG['MOZ_SYSTEM_HARFBUZZ']: - DIRS += ['harfbuzz/src'] - - DIRS += [ - '2d', - 'ycbcr', - 'angle', - 'src', - 'qcms', - 'gl', - 'layers', -- 'graphite2/src', - 'ots/src', - 'thebes', - 'ipc', - 'vr', - 'config', - ] - - if CONFIG['MOZ_ENABLE_SKIA']: -diff --git a/gfx/thebes/moz.build b/gfx/thebes/moz.build ---- a/gfx/thebes/moz.build -+++ b/gfx/thebes/moz.build -@@ -261,16 +261,19 @@ if CONFIG['MOZ_WIDGET_TOOLKIT'] in ('and - CXXFLAGS += CONFIG['CAIRO_FT_CFLAGS'] - - if CONFIG['MOZ_WIDGET_TOOLKIT'] in ('gtk2', 'gtk3'): - CXXFLAGS += CONFIG['MOZ_PANGO_CFLAGS'] - - LOCAL_INCLUDES += CONFIG['SKIA_INCLUDES'] - LOCAL_INCLUDES += ['/media/libyuv/include'] - --DEFINES['GRAPHITE2_STATIC'] = True -+if CONFIG['MOZ_SYSTEM_GRAPHITE2']: -+ CXXFLAGS += CONFIG['MOZ_GRAPHITE2_CFLAGS'] -+else: -+ DEFINES['GRAPHITE2_STATIC'] = True - - if CONFIG['MOZ_SYSTEM_HARFBUZZ']: - CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] - - if CONFIG['CLANG_CXX']: - # Suppress warnings from Skia header files. - SOURCES['gfxPlatform.cpp'].flags += ['-Wno-implicit-fallthrough'] -diff --git a/moz.configure b/moz.configure ---- a/moz.configure -+++ b/moz.configure -@@ -260,16 +260,28 @@ def extra_programs(target): - - check_prog('DSYMUTIL', delayed_getattr(extra_programs, 'DSYMUTIL'), - allow_missing=True) - check_prog('GENISOIMAGE', delayed_getattr(extra_programs, 'GENISOIMAGE'), - allow_missing=True) - check_prog('RPMBUILD', delayed_getattr(extra_programs, 'RPMBUILD'), - allow_missing=True) - -+option('--with-system-graphite2', -+ help="Use system graphite2 (located with pkgconfig)") -+ -+@depends('--with-system-graphite2', compile_environment) -+def check_for_graphite2(value, compile_env): -+ return value and compile_env -+ -+system_graphite2 = pkg_check_modules('MOZ_GRAPHITE2', 'graphite2', -+ check_for_graphite2) -+ -+set_config('MOZ_SYSTEM_GRAPHITE2', depends_if(system_graphite2)(lambda _: True)) -+ - option('--with-system-harfbuzz', - help="Use system harfbuzz (located with pkgconfig)") - - @depends('--with-system-harfbuzz', compile_environment) - def check_for_harfbuzz(value, compile_env): - return value and compile_env - - system_harfbuzz = pkg_check_modules('MOZ_HARFBUZZ', 'harfbuzz >= 1.3.3', -diff --git a/old-configure.in b/old-configure.in ---- a/old-configure.in -+++ b/old-configure.in -@@ -5060,16 +5060,37 @@ if test "$USE_FC_FREETYPE"; then - CPPFLAGS="$CPPFLAGS $FT2_CFLAGS $XCFLAGS" - MOZ_CHECK_HEADERS([fontconfig/fcfreetype.h], , - [AC_MSG_ERROR(Can't find header fontconfig/fcfreetype.h.)], [#include <fontconfig/fontconfig.h>]) - CPPFLAGS="$_SAVE_CPPFLAGS" - fi - fi - - dnl ======================================================== -+dnl Check for graphite2 -+dnl ======================================================== -+if test -n "$MOZ_SYSTEM_GRAPHITE2"; then -+ dnl graphite2.pc has bogus version, check manually -+ _SAVE_CFLAGS=$CFLAGS -+ CFLAGS="$CFLAGS $MOZ_GRAPHITE2_CFLAGS" -+ AC_TRY_COMPILE([ #include <graphite2/Font.h> -+ #define GR2_VERSION_REQUIRE(major,minor,bugfix) \ -+ ( GR2_VERSION_MAJOR * 10000 + GR2_VERSION_MINOR \ -+ * 100 + GR2_VERSION_BUGFIX >= \ -+ (major) * 10000 + (minor) * 100 + (bugfix) ) -+ ], [ -+ #if !GR2_VERSION_REQUIRE(1,3,8) -+ #error "Insufficient graphite2 version." -+ #endif -+ ], [], -+ [AC_MSG_ERROR([--with-system-graphite2 requested but no working libgraphite2 found])]) -+ CFLAGS=$_SAVE_CFLAGS -+fi -+ -+dnl ======================================================== - dnl Check for pixman and cairo - dnl ======================================================== - - MOZ_TREE_CAIRO=1 - MOZ_ARG_ENABLE_BOOL(system-cairo, - [ --enable-system-cairo Use system cairo (located with pkgconfig)], - MOZ_TREE_CAIRO=, - MOZ_TREE_CAIRO=1 ) -diff --git a/toolkit/library/moz.build b/toolkit/library/moz.build ---- a/toolkit/library/moz.build -+++ b/toolkit/library/moz.build -@@ -221,16 +221,19 @@ if CONFIG['SERVO_TARGET_DIR']: - OS_LIBS += ['-L%s' % CONFIG['SERVO_TARGET_DIR'], '-lgeckoservo'] - - if CONFIG['MOZ_SYSTEM_JPEG']: - OS_LIBS += CONFIG['MOZ_JPEG_LIBS'] - - if CONFIG['MOZ_SYSTEM_PNG']: - OS_LIBS += CONFIG['MOZ_PNG_LIBS'] - -+if CONFIG['MOZ_SYSTEM_GRAPHITE2']: -+ OS_LIBS += CONFIG['MOZ_GRAPHITE2_LIBS'] -+ - if CONFIG['MOZ_SYSTEM_HARFBUZZ']: - OS_LIBS += CONFIG['MOZ_HARFBUZZ_LIBS'] - - if CONFIG['MOZ_SYSTEM_HUNSPELL']: - OS_LIBS += CONFIG['MOZ_HUNSPELL_LIBS'] - - if CONFIG['MOZ_SYSTEM_LIBEVENT']: - OS_LIBS += CONFIG['MOZ_LIBEVENT_LIBS'] - diff --git a/gnu/packages/patches/icecat-use-system-harfbuzz.patch b/gnu/packages/patches/icecat-use-system-harfbuzz.patch deleted file mode 100644 index 083d404c13..0000000000 --- a/gnu/packages/patches/icecat-use-system-harfbuzz.patch +++ /dev/null @@ -1,279 +0,0 @@ -Copied from <https://reviewboard.mozilla.org/r/35763/diff/9> -See <https://bugzilla.mozilla.org/show_bug.cgi?id=847568> - -diff --git a/config/Makefile.in b/config/Makefile.in ---- a/config/Makefile.in -+++ b/config/Makefile.in -@@ -36,16 +36,17 @@ ifdef WRAP_SYSTEM_INCLUDES - export-preqs = \ - $(call mkdir_deps,system_wrappers) \ - $(NULL) - - export:: $(export-preqs) - $(PYTHON) -m mozbuild.action.preprocessor $(DEFINES) $(ACDEFINES) \ - -DMOZ_TREE_CAIRO=$(MOZ_TREE_CAIRO) \ - -DMOZ_TREE_PIXMAN=$(MOZ_TREE_PIXMAN) \ -+ -DMOZ_SYSTEM_HARFBUZZ=$(MOZ_SYSTEM_HARFBUZZ) \ - -DMOZ_SYSTEM_HUNSPELL=$(MOZ_SYSTEM_HUNSPELL) \ - -DMOZ_SYSTEM_BZ2=$(MOZ_SYSTEM_BZ2) \ - -DMOZ_SYSTEM_ZLIB=$(MOZ_SYSTEM_ZLIB) \ - -DMOZ_SYSTEM_PNG=$(MOZ_SYSTEM_PNG) \ - -DMOZ_SYSTEM_JPEG=$(MOZ_SYSTEM_JPEG) \ - -DMOZ_SYSTEM_LIBEVENT=$(MOZ_SYSTEM_LIBEVENT) \ - -DMOZ_SYSTEM_LIBVPX=$(MOZ_SYSTEM_LIBVPX) \ - -DMOZ_SYSTEM_ICU=$(MOZ_SYSTEM_ICU) \ -diff --git a/config/system-headers b/config/system-headers ---- a/config/system-headers -+++ b/config/system-headers -@@ -1260,16 +1260,21 @@ zlib.h - #ifdef MOZ_ENABLE_STARTUP_NOTIFICATION - libsn/sn.h - libsn/sn-common.h - libsn/sn-launchee.h - libsn/sn-launcher.h - libsn/sn-monitor.h - libsn/sn-util.h - #endif -+#if MOZ_SYSTEM_HARFBUZZ==1 -+harfbuzz/hb-glib.h -+harfbuzz/hb-ot.h -+harfbuzz/hb.h -+#endif - #if MOZ_SYSTEM_HUNSPELL==1 - hunspell.hxx - #endif - #if MOZ_SYSTEM_BZ2==1 - bzlib.h - #endif - #ifdef MOZ_ENABLE_GIO - gio/gio.h -diff --git a/dom/base/moz.build b/dom/base/moz.build ---- a/dom/base/moz.build -+++ b/dom/base/moz.build -@@ -474,16 +474,19 @@ for var in ('MOZ_B2G_RIL'): - DEFINES[var] = True - - if CONFIG['MOZ_BUILD_APP'] in ['browser', 'mobile/android', 'xulrunner']: - DEFINES['HAVE_SIDEBAR'] = True - - if CONFIG['MOZ_X11']: - CXXFLAGS += CONFIG['TK_CFLAGS'] - -+if CONFIG['MOZ_SYSTEM_HARFBUZZ']: -+ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] -+ - GENERATED_FILES += [ - 'PropertyUseCounterMap.inc', - 'UseCounterList.h', - ] - - countermap = GENERATED_FILES['PropertyUseCounterMap.inc'] - countermap.script = 'gen-usecounters.py:property_map' - countermap.inputs = ['UseCounters.conf'] -diff --git a/gfx/harfbuzz/README-mozilla b/gfx/harfbuzz/README-mozilla ---- a/gfx/harfbuzz/README-mozilla -+++ b/gfx/harfbuzz/README-mozilla -@@ -14,8 +14,13 @@ this file when updating harfbuzz, and ch - - The normal approach to updating harfbuzz, therefore, is to pull the latest HB - source into a scratch directory and do a local build; then copy the original - sources AND the generated header mentioned above from the build directory into - the mozilla tree. - - If the collection of source files changes, manual updates to moz.build may be - needed, as we don't use the upstream makefiles. -+ -+The in-tree copy may be omitted during build by --with-system-harfbuzz. -+Make sure to keep pkg-config version check within old-configure.in in sync -+with checkout version or increment latest tag by one if it's not based -+on upstream release. -diff --git a/gfx/moz.build b/gfx/moz.build ---- a/gfx/moz.build -+++ b/gfx/moz.build -@@ -2,26 +2,28 @@ - # vim: set filetype=python: - # This Source Code Form is subject to the terms of the Mozilla Public - # License, v. 2.0. If a copy of the MPL was not distributed with this - # file, You can obtain one at http://mozilla.org/MPL/2.0/. - - if CONFIG['MOZ_TREE_CAIRO']: - DIRS += ['cairo'] - -+if not CONFIG['MOZ_SYSTEM_HARFBUZZ']: -+ DIRS += ['harfbuzz/src'] -+ - DIRS += [ - '2d', - 'ycbcr', - 'angle', - 'src', - 'qcms', - 'gl', - 'layers', - 'graphite2/src', -- 'harfbuzz/src', - 'ots/src', - 'thebes', - 'ipc', - 'vr', - 'config', - ] - - if CONFIG['MOZ_ENABLE_SKIA']: -diff --git a/gfx/skia/generate_mozbuild.py b/gfx/skia/generate_mozbuild.py ---- a/gfx/skia/generate_mozbuild.py -+++ b/gfx/skia/generate_mozbuild.py -@@ -138,16 +138,19 @@ if CONFIG['GNU_CXX'] and not CONFIG['CLA - if CONFIG['CLANG_CXX'] or CONFIG['CLANG_CL']: - CXXFLAGS += [ - '-Wno-implicit-fallthrough', - '-Wno-inconsistent-missing-override', - '-Wno-macro-redefined', - '-Wno-unused-private-field', - ] - -+if CONFIG['MOZ_SYSTEM_HARFBUZZ']: -+ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] -+ - if CONFIG['MOZ_WIDGET_TOOLKIT'] in ('gtk2', 'gtk3', 'android'): - CXXFLAGS += CONFIG['MOZ_CAIRO_CFLAGS'] - CXXFLAGS += CONFIG['CAIRO_FT_CFLAGS'] - - if CONFIG['MOZ_WIDGET_TOOLKIT'] in ('gtk2', 'gtk3'): - CXXFLAGS += CONFIG['MOZ_PANGO_CFLAGS'] - """ - -diff --git a/gfx/skia/moz.build b/gfx/skia/moz.build ---- a/gfx/skia/moz.build -+++ b/gfx/skia/moz.build -@@ -748,14 +748,17 @@ if CONFIG['GNU_CXX'] and not CONFIG['CLA - if CONFIG['CLANG_CXX'] or CONFIG['CLANG_CL']: - CXXFLAGS += [ - '-Wno-implicit-fallthrough', - '-Wno-inconsistent-missing-override', - '-Wno-macro-redefined', - '-Wno-unused-private-field', - ] - -+if CONFIG['MOZ_SYSTEM_HARFBUZZ']: -+ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] -+ - if CONFIG['MOZ_WIDGET_TOOLKIT'] in ('gtk2', 'gtk3', 'android'): - CXXFLAGS += CONFIG['MOZ_CAIRO_CFLAGS'] - CXXFLAGS += CONFIG['CAIRO_FT_CFLAGS'] - - if CONFIG['MOZ_WIDGET_TOOLKIT'] in ('gtk2', 'gtk3'): - CXXFLAGS += CONFIG['MOZ_PANGO_CFLAGS'] -diff --git a/gfx/thebes/moz.build b/gfx/thebes/moz.build ---- a/gfx/thebes/moz.build -+++ b/gfx/thebes/moz.build -@@ -263,11 +263,14 @@ if CONFIG['MOZ_WIDGET_TOOLKIT'] in ('and - if CONFIG['MOZ_WIDGET_TOOLKIT'] in ('gtk2', 'gtk3'): - CXXFLAGS += CONFIG['MOZ_PANGO_CFLAGS'] - - LOCAL_INCLUDES += CONFIG['SKIA_INCLUDES'] - LOCAL_INCLUDES += ['/media/libyuv/include'] - - DEFINES['GRAPHITE2_STATIC'] = True - -+if CONFIG['MOZ_SYSTEM_HARFBUZZ']: -+ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] -+ - if CONFIG['CLANG_CXX']: - # Suppress warnings from Skia header files. - SOURCES['gfxPlatform.cpp'].flags += ['-Wno-implicit-fallthrough'] -diff --git a/intl/unicharutil/util/moz.build b/intl/unicharutil/util/moz.build ---- a/intl/unicharutil/util/moz.build -+++ b/intl/unicharutil/util/moz.build -@@ -37,9 +37,12 @@ if CONFIG['_MSC_VER']: - DEFINES['_USE_ANSI_CPP'] = True - # Don't include directives about which CRT to use - CFLAGS += ['-Zl'] - CXXFLAGS += ['-Zl'] - - if CONFIG['ENABLE_INTL_API']: - USE_LIBS += ['icu'] - -+if CONFIG['MOZ_SYSTEM_HARFBUZZ']: -+ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] -+ - DIST_INSTALL = True -diff --git a/moz.configure b/moz.configure ---- a/moz.configure -+++ b/moz.configure -@@ -260,16 +260,28 @@ def extra_programs(target): - - check_prog('DSYMUTIL', delayed_getattr(extra_programs, 'DSYMUTIL'), - allow_missing=True) - check_prog('GENISOIMAGE', delayed_getattr(extra_programs, 'GENISOIMAGE'), - allow_missing=True) - check_prog('RPMBUILD', delayed_getattr(extra_programs, 'RPMBUILD'), - allow_missing=True) - -+option('--with-system-harfbuzz', -+ help="Use system harfbuzz (located with pkgconfig)") -+ -+@depends('--with-system-harfbuzz', compile_environment) -+def check_for_harfbuzz(value, compile_env): -+ return value and compile_env -+ -+system_harfbuzz = pkg_check_modules('MOZ_HARFBUZZ', 'harfbuzz >= 1.3.3', -+ check_for_harfbuzz) -+ -+set_config('MOZ_SYSTEM_HARFBUZZ', depends_if(system_harfbuzz)(lambda _: True)) -+ - option('--enable-system-hunspell', - help="Use system hunspell (located with pkgconfig)") - - @depends('--enable-system-hunspell', compile_environment) - def check_for_hunspell(value, compile_env): - return value and compile_env - - system_hunspell = pkg_check_modules('MOZ_HUNSPELL', 'hunspell', -diff --git a/netwerk/dns/moz.build b/netwerk/dns/moz.build ---- a/netwerk/dns/moz.build -+++ b/netwerk/dns/moz.build -@@ -61,16 +61,19 @@ etld_data = GENERATED_FILES['etld_data.i - etld_data.script = 'prepare_tlds.py' - etld_data.inputs = ['effective_tld_names.dat'] - - # need to include etld_data.inc - LOCAL_INCLUDES += [ - '/netwerk/base', - ] - -+if CONFIG['MOZ_SYSTEM_HARFBUZZ']: -+ CXXFLAGS += CONFIG['MOZ_HARFBUZZ_CFLAGS'] -+ - if CONFIG['ENABLE_INTL_API']: - DEFINES['IDNA2008'] = True - USE_LIBS += ['icu'] - else: - UNIFIED_SOURCES += [ - 'nameprep.c', - ] - -diff --git a/toolkit/library/moz.build b/toolkit/library/moz.build ---- a/toolkit/library/moz.build -+++ b/toolkit/library/moz.build -@@ -221,16 +221,19 @@ if CONFIG['SERVO_TARGET_DIR']: - OS_LIBS += ['-L%s' % CONFIG['SERVO_TARGET_DIR'], '-lgeckoservo'] - - if CONFIG['MOZ_SYSTEM_JPEG']: - OS_LIBS += CONFIG['MOZ_JPEG_LIBS'] - - if CONFIG['MOZ_SYSTEM_PNG']: - OS_LIBS += CONFIG['MOZ_PNG_LIBS'] - -+if CONFIG['MOZ_SYSTEM_HARFBUZZ']: -+ OS_LIBS += CONFIG['MOZ_HARFBUZZ_LIBS'] -+ - if CONFIG['MOZ_SYSTEM_HUNSPELL']: - OS_LIBS += CONFIG['MOZ_HUNSPELL_LIBS'] - - if CONFIG['MOZ_SYSTEM_LIBEVENT']: - OS_LIBS += CONFIG['MOZ_LIBEVENT_LIBS'] - - if CONFIG['MOZ_SYSTEM_LIBVPX']: - OS_LIBS += CONFIG['MOZ_LIBVPX_LIBS'] - diff --git a/gnu/packages/patches/icecat-use-system-media-libs.patch b/gnu/packages/patches/icecat-use-system-media-libs.patch new file mode 100644 index 0000000000..648585a6f0 --- /dev/null +++ b/gnu/packages/patches/icecat-use-system-media-libs.patch @@ -0,0 +1,381 @@ +Support building with system media libraries. +See <https://bugzilla.mozilla.org/show_bug.cgi?id=517422> + +Based on: + https://svnweb.freebsd.org/ports/head/www/firefox-esr/files/patch-z-bug517422?revision=472833&view=markup + +Changes to files within the bundled libraries are omitted, since those files +are removed from Guix sources. Modified for use with patch -p1, and to apply +cleanly to GNU IceCat. + +--- icecat-60.2.0/build/moz.configure/old.configure ++++ icecat-60.2.0/build/moz.configure/old.configure +@@ -273,7 +273,12 @@ + '--with-system-libvpx', + '--with-system-nspr', + '--with-system-nss', ++ '--with-system-ogg', + '--with-system-png', ++ '--with-system-soundtouch', ++ '--with-system-theora', ++ '--with-system-tremor', ++ '--with-system-vorbis', + '--with-system-zlib', + '--with-thumb', + '--with-thumb-interwork', +--- icecat-60.2.0/config/external/moz.build ++++ icecat-60.2.0/config/external/moz.build +@@ -23,12 +23,21 @@ + + external_dirs += ['modules/xz-embedded'] + +-if CONFIG['MOZ_VORBIS']: ++if not CONFIG['MOZ_SYSTEM_OGG']: ++ external_dirs += ['media/libogg'] ++ ++if CONFIG['MOZ_VORBIS'] and not CONFIG['MOZ_SYSTEM_VORBIS']: + external_dirs += ['media/libvorbis'] + +-if CONFIG['MOZ_TREMOR']: ++if CONFIG['MOZ_TREMOR'] and not CONFIG['MOZ_SYSTEM_TREMOR']: + external_dirs += ['media/libtremor'] + ++if not CONFIG['MOZ_SYSTEM_THEORA']: ++ external_dirs += ['media/libtheora'] ++ ++if not CONFIG['MOZ_SYSTEM_SOUNDTOUCH']: ++ external_dirs += ['media/libsoundtouch'] ++ + if CONFIG['MOZ_WEBM_ENCODER']: + external_dirs += ['media/libmkv'] + +@@ -51,11 +60,8 @@ + 'media/kiss_fft', + 'media/libcubeb', + 'media/libnestegg', +- 'media/libogg', + 'media/libopus', +- 'media/libtheora', + 'media/libspeex_resampler', +- 'media/libsoundtouch', + 'media/mp4parse-rust', + 'media/psshparser' + ] +--- icecat-60.2.0/config/system-headers.mozbuild ++++ icecat-60.2.0/config/system-headers.mozbuild +@@ -1324,6 +1324,28 @@ + 'harfbuzz/hb.h', + ] + ++if CONFIG['MOZ_SYSTEM_OGG']: ++ system_headers += [ ++ 'ogg/ogg.h', ++ 'ogg/os_types.h', ++ ] ++ ++if CONFIG['MOZ_SYSTEM_THEORA']: ++ system_headers += [ ++ 'theora/theoradec.h', ++ ] ++ ++if CONFIG['MOZ_SYSTEM_VORBIS']: ++ system_headers += [ ++ 'vorbis/codec.h', ++ 'vorbis/vorbisenc.h', ++ ] ++ ++if CONFIG['MOZ_SYSTEM_TREMOR']: ++ system_headers += [ ++ 'tremor/ivorbiscodec.h', ++ ] ++ + if CONFIG['MOZ_SYSTEM_LIBVPX']: + system_headers += [ + 'vpx_mem/vpx_mem.h', +--- icecat-60.2.0/dom/media/AudioStream.cpp ++++ icecat-60.2.0/dom/media/AudioStream.cpp +@@ -121,7 +121,9 @@ + : mMonitor("AudioStream") + , mChannels(0) + , mOutChannels(0) ++#ifndef MOZ_SYSTEM_SOUNDTOUCH + , mTimeStretcher(nullptr) ++#endif + , mDumpFile(nullptr) + , mState(INITIALIZED) + , mDataSource(aSource) +@@ -142,9 +144,11 @@ + if (mDumpFile) { + fclose(mDumpFile); + } ++#ifndef MOZ_SYSTEM_SOUNDTOUCH + if (mTimeStretcher) { + soundtouch::destroySoundTouchObj(mTimeStretcher); + } ++#endif + #if defined(XP_WIN) + if (XRE_IsContentProcess()) { + audio::AudioNotificationReceiver::Unregister(this); +@@ -168,7 +172,11 @@ + { + mMonitor.AssertCurrentThreadOwns(); + if (!mTimeStretcher) { ++#ifdef MOZ_SYSTEM_SOUNDTOUCH ++ mTimeStretcher = new soundtouch::SoundTouch(); ++#else + mTimeStretcher = soundtouch::createSoundTouchObj(); ++#endif + mTimeStretcher->setSampleRate(mAudioClock.GetInputRate()); + mTimeStretcher->setChannels(mOutChannels); + mTimeStretcher->setPitch(1.0); +--- icecat-60.2.0/dom/media/AudioStream.h ++++ icecat-60.2.0/dom/media/AudioStream.h +@@ -15,7 +15,11 @@ + #include "mozilla/TimeStamp.h" + #include "mozilla/UniquePtr.h" + #include "CubebUtils.h" ++#ifdef MOZ_SYSTEM_SOUNDTOUCH ++#include "soundtouch/SoundTouch.h" ++#else + #include "soundtouch/SoundTouchFactory.h" ++#endif + + #if defined(XP_WIN) + #include "mozilla/audio/AudioNotificationReceiver.h" +@@ -297,7 +301,11 @@ + uint32_t mChannels; + uint32_t mOutChannels; + AudioClock mAudioClock; ++#ifdef MOZ_SYSTEM_SOUNDTOUCH ++ nsAutoPtr<soundtouch::SoundTouch> mTimeStretcher; ++#else + soundtouch::SoundTouch* mTimeStretcher; ++#endif + + // Output file for dumping audio + FILE* mDumpFile; +--- icecat-60.2.0/dom/media/moz.build ++++ icecat-60.2.0/dom/media/moz.build +@@ -327,6 +327,21 @@ + + DEFINES['MOZILLA_INTERNAL_API'] = True + ++if CONFIG['MOZ_SYSTEM_OGG']: ++ CXXFLAGS += CONFIG['MOZ_OGG_CFLAGS'] ++ ++if CONFIG['MOZ_SYSTEM_THEORA']: ++ CXXFLAGS += CONFIG['MOZ_THEORA_CFLAGS'] ++ ++if CONFIG['MOZ_SYSTEM_VORBIS']: ++ CXXFLAGS += CONFIG['MOZ_VORBIS_CFLAGS'] ++ ++if CONFIG['MOZ_SYSTEM_TREMOR']: ++ CXXFLAGS += CONFIG['MOZ_TREMOR_CFLAGS'] ++ ++if CONFIG['MOZ_SYSTEM_SOUNDTOUCH']: ++ CXXFLAGS += CONFIG['MOZ_SOUNDTOUCH_CFLAGS'] ++ + if CONFIG['MOZ_ANDROID_HLS_SUPPORT']: + DEFINES['MOZ_ANDROID_HLS_SUPPORT'] = True + +--- icecat-60.2.0/dom/media/platforms/ffmpeg/ffvpx/FFVPXRuntimeLinker.cpp ++++ icecat-60.2.0/dom/media/platforms/ffmpeg/ffvpx/FFVPXRuntimeLinker.cpp +@@ -15,9 +15,13 @@ + #include <windows.h> + #endif + ++#ifdef MOZ_SYSTEM_SOUNDTOUCH ++#include "nsXPCOMPrivate.h" // for XUL_DLL ++#else + // We use a known symbol located in lgpllibs to determine its location. + // soundtouch happens to be always included in lgpllibs + #include "soundtouch/SoundTouch.h" ++#endif + + namespace mozilla { + +@@ -64,6 +68,12 @@ + + sLinkStatus = LinkStatus_FAILED; + ++#ifdef MOZ_SYSTEM_SOUNDTOUCH ++ // We retrieve the path of the XUL library as this is where mozavcodec and ++ // mozavutil libs are located. ++ char* path = ++ PR_GetLibraryFilePathname(XUL_DLL, (PRFuncPtr)&FFVPXRuntimeLinker::Init); ++#else + // We retrieve the path of the lgpllibs library as this is where mozavcodec + // and mozavutil libs are located. + PathString lgpllibsname = GetLibraryName(nullptr, "lgpllibs"); +@@ -73,6 +83,7 @@ + PathString path = + GetLibraryFilePathname(lgpllibsname.get(), + (PRFuncPtr)&soundtouch::SoundTouch::getVersionId); ++#endif + if (path.IsEmpty()) { + return false; + } +--- icecat-60.2.0/old-configure.in ++++ icecat-60.2.0/old-configure.in +@@ -2451,6 +2451,111 @@ + fi + fi # COMPILE_ENVIRONMENT + ++dnl ======================================================== ++dnl Check for libogg ++dnl ======================================================== ++ ++MOZ_ARG_WITH_BOOL(system-ogg, ++[ --with-system-ogg Use system libogg (located with pkgconfig)], ++MOZ_SYSTEM_OGG=1, ++MOZ_SYSTEM_OGG=) ++ ++if test -n "$MOZ_SYSTEM_OGG"; then ++ PKG_CHECK_MODULES(MOZ_OGG, ogg >= 1.3.3) ++ ++ _SAVE_LIBS=$LIBS ++ LIBS="$LIBS $MOZ_OGG_LIBS" ++ AC_CHECK_FUNC(ogg_set_mem_functions, [], ++ [AC_DEFINE(MOZ_OGG_NO_MEM_REPORTING)]) ++ LIBS=$_SAVE_LIBS ++fi ++ ++AC_SUBST(MOZ_SYSTEM_OGG) ++ ++dnl ======================================================== ++dnl Check for libvorbis ++dnl ======================================================== ++ ++MOZ_ARG_WITH_BOOL(system-vorbis, ++[ --with-system-vorbis Use system libvorbis (located with pkgconfig)], ++MOZ_SYSTEM_VORBIS=1, ++MOZ_SYSTEM_VORBIS=) ++ ++if test -n "$MOZ_SYSTEM_VORBIS"; then ++ PKG_CHECK_MODULES(MOZ_VORBIS, vorbis vorbisenc >= 1.3.6) ++fi ++ ++AC_SUBST(MOZ_SYSTEM_VORBIS) ++ ++dnl ======================================================== ++dnl Check for integer-only libvorbis aka tremor ++dnl ======================================================== ++ ++MOZ_ARG_WITH_BOOL(system-tremor, ++[ --with-system-tremor Use system libtremor (located with pkgconfig)], ++MOZ_SYSTEM_TREMOR=1, ++MOZ_SYSTEM_TREMOR=) ++ ++if test -n "$MOZ_SYSTEM_TREMOR"; then ++ PKG_CHECK_MODULES(MOZ_TREMOR, vorbisidec >= 1.2.1) ++fi ++ ++AC_SUBST(MOZ_SYSTEM_TREMOR) ++ ++dnl ======================================================== ++dnl Check for libtheora ++dnl ======================================================== ++ ++MOZ_ARG_WITH_BOOL(system-theora, ++[ --with-system-theora Use system libtheora (located with pkgconfig)], ++MOZ_SYSTEM_THEORA=1, ++MOZ_SYSTEM_THEORA=) ++ ++if test -n "$MOZ_SYSTEM_THEORA"; then ++ PKG_CHECK_MODULES(MOZ_THEORA, theora >= 1.2) ++fi ++ ++AC_SUBST(MOZ_SYSTEM_THEORA) ++ ++dnl ======================================================== ++dnl Check for libSoundTouch ++dnl ======================================================== ++ ++MOZ_ARG_WITH_BOOL(system-soundtouch, ++[ --with-system-soundtouch Use system libSoundTouch (located with pkgconfig)], ++MOZ_SYSTEM_SOUNDTOUCH=1, ++MOZ_SYSTEM_SOUNDTOUCH=) ++ ++if test -n "$MOZ_SYSTEM_SOUNDTOUCH"; then ++ PKG_CHECK_MODULES(MOZ_SOUNDTOUCH, soundtouch >= 1.9.0) ++ ++ AC_LANG_SAVE ++ AC_LANG_CPLUSPLUS ++ _SAVE_CXXFLAGS=$CXXFLAGS ++ CXXFLAGS="$CXXFLAGS $MOZ_SOUNDTOUCH_CFLAGS" ++ AC_CACHE_CHECK(for soundtouch sample type, ++ ac_cv_soundtouch_sample_type, ++ [AC_TRY_COMPILE([#include <SoundTouch.h> ++ #ifndef SOUNDTOUCH_INTEGER_SAMPLES ++ #error soundtouch expects float samples ++ #endif], ++ [], ++ [ac_cv_soundtouch_sample_type=short], ++ [ac_cv_soundtouch_sample_type=float])]) ++ CXXFLAGS=$_SAVE_CXXFLAGS ++ AC_LANG_RESTORE ++ ++ if test \( -n "$MOZ_SAMPLE_TYPE_S16" -a "$ac_cv_soundtouch_sample_type" != short \) \ ++ -o \( -n "$MOZ_SAMPLE_TYPE_FLOAT32" -a "$ac_cv_soundtouch_sample_type" != float \) ; then ++ AC_MSG_ERROR([SoundTouch library is built with incompatible sample type. Either rebuild the library with/without --enable-integer-samples, chase default Mozilla sample type or remove --with-system-soundtouch.]) ++ fi ++fi ++ ++if test -n "$MOZ_SYSTEM_SOUNDTOUCH"; then ++ AC_DEFINE(MOZ_SYSTEM_SOUNDTOUCH) ++fi ++AC_SUBST(MOZ_SYSTEM_SOUNDTOUCH) ++ + dnl system libvpx Support + dnl ======================================================== + MOZ_ARG_WITH_BOOL(system-libvpx, +--- icecat-60.2.0/toolkit/library/moz.build ++++ icecat-60.2.0/toolkit/library/moz.build +@@ -244,6 +244,21 @@ + if CONFIG['MOZ_SYSTEM_HUNSPELL']: + OS_LIBS += CONFIG['MOZ_HUNSPELL_LIBS'] + ++if CONFIG['MOZ_SYSTEM_OGG']: ++ OS_LIBS += CONFIG['MOZ_OGG_LIBS'] ++ ++if CONFIG['MOZ_SYSTEM_THEORA']: ++ OS_LIBS += CONFIG['MOZ_THEORA_LIBS'] ++ ++if CONFIG['MOZ_SYSTEM_VORBIS']: ++ OS_LIBS += CONFIG['MOZ_VORBIS_LIBS'] ++ ++if CONFIG['MOZ_SYSTEM_TREMOR']: ++ OS_LIBS += CONFIG['MOZ_TREMOR_LIBS'] ++ ++if CONFIG['MOZ_SYSTEM_SOUNDTOUCH']: ++ OS_LIBS += CONFIG['MOZ_SOUNDTOUCH_LIBS'] ++ + if CONFIG['MOZ_SYSTEM_LIBEVENT']: + OS_LIBS += CONFIG['MOZ_LIBEVENT_LIBS'] + +--- icecat-60.2.0/xpcom/build/XPCOMInit.cpp ++++ icecat-60.2.0/xpcom/build/XPCOMInit.cpp +@@ -138,7 +138,9 @@ + + #include "mozilla/ipc/GeckoChildProcessHost.h" + ++#ifndef MOZ_OGG_NO_MEM_REPORTING + #include "ogg/ogg.h" ++#endif + #if defined(MOZ_VPX) && !defined(MOZ_VPX_NO_MEM_REPORTING) + #if defined(HAVE_STDINT_H) + // mozilla-config.h defines HAVE_STDINT_H, and then it's defined *again* in +@@ -639,11 +641,13 @@ + // this oddness. + mozilla::SetICUMemoryFunctions(); + ++#ifndef MOZ_OGG_NO_MEM_REPORTING + // Do the same for libogg. + ogg_set_mem_functions(OggReporter::CountingMalloc, + OggReporter::CountingCalloc, + OggReporter::CountingRealloc, + OggReporter::CountingFree); ++#endif + + #if defined(MOZ_VPX) && !defined(MOZ_VPX_NO_MEM_REPORTING) + // And for VPX. diff --git a/gnu/packages/patches/libgxps-CVE-2017-11590.patch b/gnu/packages/patches/libgxps-CVE-2017-11590.patch deleted file mode 100644 index 9caa79b6f0..0000000000 --- a/gnu/packages/patches/libgxps-CVE-2017-11590.patch +++ /dev/null @@ -1,48 +0,0 @@ -Fix CVE-2017-11590: - -https://bugzilla.gnome.org/show_bug.cgi?id=785479 -https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-11590 - -Patch copied from upstream source repository: - -https://git.gnome.org/browse/libgxps/commit/?id=9d5d292055250ed298f3b89dc332d6db4003a031 - -From 9d5d292055250ed298f3b89dc332d6db4003a031 Mon Sep 17 00:00:00 2001 -From: Marek Kasik <mkasik@redhat.com> -Date: Wed, 26 Jul 2017 16:23:37 +0200 -Subject: archive: Check for pathname being NULL before dereferencing - -Check whether "archive_entry_pathname ()" returns a non-NULL pathname -before using it to avoid a NULL pointer being dereferenced. - -https://bugzilla.gnome.org/show_bug.cgi?id=785479 ---- - libgxps/gxps-archive.c | 5 ++++- - 1 file changed, 4 insertions(+), 1 deletion(-) - -diff --git a/libgxps/gxps-archive.c b/libgxps/gxps-archive.c -index acf8d7d..e763773 100644 ---- a/libgxps/gxps-archive.c -+++ b/libgxps/gxps-archive.c -@@ -257,6 +257,7 @@ gxps_archive_initable_init (GInitable *initable, - GXPSArchive *archive; - ZipArchive *zip; - struct archive_entry *entry; -+ const gchar *pathname; - - archive = GXPS_ARCHIVE (initable); - -@@ -281,7 +282,9 @@ gxps_archive_initable_init (GInitable *initable, - - while (gxps_zip_archive_iter_next (zip, &entry)) { - /* FIXME: We can ignore directories here */ -- g_hash_table_add (archive->entries, g_strdup (archive_entry_pathname (entry))); -+ pathname = archive_entry_pathname (entry); -+ if (pathname != NULL) -+ g_hash_table_add (archive->entries, g_strdup (pathname)); - archive_read_data_skip (zip->archive); - } - --- -cgit v0.12 - diff --git a/gnu/packages/patches/libssh-hostname-parser-bug.patch b/gnu/packages/patches/libssh-hostname-parser-bug.patch index 69f46cbdd6..de2336e86d 100644 --- a/gnu/packages/patches/libssh-hostname-parser-bug.patch +++ b/gnu/packages/patches/libssh-hostname-parser-bug.patch @@ -1,31 +1,17 @@ -Fix "Hostname" parsing in OpenSSH config files, as reported -at <https://red.libssh.org/issues/260>. - -From: Niels Ole Salscheider <niels_ole@salscheider-online.de> -Date: Mon, 8 May 2017 17:36:13 +0200 -Subject: [PATCH] Fix reading of the first parameter - -This is a fixup for 7b8b5eb4eac314a3a29be812bef0264c6611f6e7. -Previously, it would return as long as the parameter was _not_ seen -before. It also did not handle the case for the unsupported opcode (-1) +It does not handle the case for the unsupported opcode (-1) which would cause a segfault when accessing the "seen" array. ---- - src/config.c | 5 +++-- - 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/src/config.c b/src/config.c -index 7c03b27..238a655 100644 +index c5313ec8..72e07639 100644 --- a/src/config.c +++ b/src/config.c -@@ -218,8 +218,9 @@ static int ssh_config_parse_line(ssh_session session, const char *line, +@@ -218,7 +218,8 @@ static int ssh_config_parse_line(ssh_session session, const char *line, } opcode = ssh_config_get_opcode(keyword); - if (*parsing == 1 && opcode != SOC_HOST) { -- if (seen[opcode] == 0) { + if (*parsing == 1 && opcode != SOC_HOST && + opcode > SOC_UNSUPPORTED && opcode < SOC_END) { -+ if (seen[opcode] == 1) { + if (seen[opcode] != 0) { return 0; } - seen[opcode] = 1; diff --git a/gnu/packages/patches/libvpx-use-after-free-in-postproc.patch b/gnu/packages/patches/libvpx-use-after-free-in-postproc.patch new file mode 100644 index 0000000000..04f2a953b7 --- /dev/null +++ b/gnu/packages/patches/libvpx-use-after-free-in-postproc.patch @@ -0,0 +1,34 @@ +From 52add5896661d186dec284ed646a4b33b607d2c7 Mon Sep 17 00:00:00 2001 +From: Jerome Jiang <jianj@google.com> +Date: Wed, 23 May 2018 15:43:00 -0700 +Subject: [PATCH] VP8: Fix use-after-free in postproc. + +The pointer in vp8 postproc refers to show_frame_mi which is only +updated on show frame. However, when there is a no-show frame which also +changes the size (thus new frame buffers allocated), show_frame_mi is +not updated with new frame buffer memory. + +Change the pointer in postproc to mi which is always updated. + +Bug: 842265 +Change-Id: I33874f2112b39f74562cba528432b5f239e6a7bd +--- + vp8/common/postproc.c | 2 +- + 1 file changed, 1 insertion(+), 1 deletion(-) + +diff --git a/vp8/common/postproc.c b/vp8/common/postproc.c +index d67ee8a57..8c292d616 100644 +--- a/vp8/common/postproc.c ++++ b/vp8/common/postproc.c +@@ -65,7 +65,7 @@ void vp8_deblock(VP8_COMMON *cm, YV12_BUFFER_CONFIG *source, + double level = 6.0e-05 * q * q * q - .0067 * q * q + .306 * q + .0065; + int ppl = (int)(level + .5); + +- const MODE_INFO *mode_info_context = cm->show_frame_mi; ++ const MODE_INFO *mode_info_context = cm->mi; + int mbr, mbc; + + /* The pixel thresholds are adjusted according to if or not the macroblock +-- +2.19.0 + diff --git a/gnu/packages/patches/python-CVE-2018-14647.patch b/gnu/packages/patches/python-CVE-2018-14647.patch new file mode 100644 index 0000000000..24f8d21820 --- /dev/null +++ b/gnu/packages/patches/python-CVE-2018-14647.patch @@ -0,0 +1,61 @@ +Fix CVE-2018-14647: +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2018-14647 +https://bugs.python.org/issue34623 + +Taken from upstream: +https://github.com/python/cpython/commit/f7666e828cc3d5873136473ea36ba2013d624fa1 + +diff --git Include/pyexpat.h Include/pyexpat.h +index 44259bf6d7..07020b5dc9 100644 +--- Include/pyexpat.h ++++ Include/pyexpat.h +@@ -3,7 +3,7 @@ + + /* note: you must import expat.h before importing this module! */ + +-#define PyExpat_CAPI_MAGIC "pyexpat.expat_CAPI 1.0" ++#define PyExpat_CAPI_MAGIC "pyexpat.expat_CAPI 1.1" + #define PyExpat_CAPSULE_NAME "pyexpat.expat_CAPI" + + struct PyExpat_CAPI +@@ -48,6 +48,8 @@ struct PyExpat_CAPI + enum XML_Status (*SetEncoding)(XML_Parser parser, const XML_Char *encoding); + int (*DefaultUnknownEncodingHandler)( + void *encodingHandlerData, const XML_Char *name, XML_Encoding *info); ++ /* might be none for expat < 2.1.0 */ ++ int (*SetHashSalt)(XML_Parser parser, unsigned long hash_salt); + /* always add new stuff to the end! */ + }; + +diff --git Modules/_elementtree.c Modules/_elementtree.c +index 707ab2912b..53f05f937f 100644 +--- Modules/_elementtree.c ++++ Modules/_elementtree.c +@@ -3261,6 +3261,11 @@ _elementtree_XMLParser___init___impl(XMLParserObject *self, PyObject *html, + PyErr_NoMemory(); + return -1; + } ++ /* expat < 2.1.0 has no XML_SetHashSalt() */ ++ if (EXPAT(SetHashSalt) != NULL) { ++ EXPAT(SetHashSalt)(self->parser, ++ (unsigned long)_Py_HashSecret.expat.hashsalt); ++ } + + if (target) { + Py_INCREF(target); +diff --git Modules/pyexpat.c Modules/pyexpat.c +index 47c3e86c20..aa21d93c11 100644 +--- Modules/pyexpat.c ++++ Modules/pyexpat.c +@@ -1887,6 +1887,11 @@ MODULE_INITFUNC(void) + capi.SetStartDoctypeDeclHandler = XML_SetStartDoctypeDeclHandler; + capi.SetEncoding = XML_SetEncoding; + capi.DefaultUnknownEncodingHandler = PyUnknownEncodingHandler; ++#if XML_COMBINED_VERSION >= 20100 ++ capi.SetHashSalt = XML_SetHashSalt; ++#else ++ capi.SetHashSalt = NULL; ++#endif + + /* export using capsule */ + capi_object = PyCapsule_New(&capi, PyExpat_CAPSULE_NAME, NULL); diff --git a/gnu/packages/patches/python-testtools.patch b/gnu/packages/patches/python-testtools.patch new file mode 100644 index 0000000000..42536e50f9 --- /dev/null +++ b/gnu/packages/patches/python-testtools.patch @@ -0,0 +1,57 @@ +https://github.com/testing-cabal/testtools/commit/29004731f9c480b7c44a9c2605513d50d372898f.patch +Should be fixed in the next release + +From 29004731f9c480b7c44a9c2605513d50d372898f Mon Sep 17 00:00:00 2001 +From: =?UTF-8?q?Miro=20Hron=C4=8Dok?= <miro@hroncok.cz> +Date: Thu, 17 May 2018 17:52:26 +0200 +Subject: [PATCH] Fix the tests on Python 3.7 + +Exception's repr got changed not to include trailing comma + +Fixes https://github.com/testing-cabal/testtools/issues/270 +--- + .travis.yml | 1 + + testtools/tests/matchers/test_exception.py | 11 +++++++++-- + 2 files changed, 10 insertions(+), 2 deletions(-) + +diff --git a/.travis.yml b/.travis.yml +index 7f1f4db7..784608e0 100644 +--- a/.travis.yml ++++ b/.travis.yml +@@ -5,6 +5,7 @@ python: + - "3.4" + - "3.5" + - "3.6" ++ - "3.7-dev" + - "pypy" + + install: +diff --git a/testtools/tests/matchers/test_exception.py b/testtools/tests/matchers/test_exception.py +index 6cd80af1..acd39252 100644 +--- a/testtools/tests/matchers/test_exception.py ++++ b/testtools/tests/matchers/test_exception.py +@@ -32,15 +32,22 @@ class TestMatchesExceptionInstanceInterface(TestCase, TestMatchersInterface): + matches_matches = [error_foo] + matches_mismatches = [error_bar, error_base_foo] + ++ if sys.version_info >= (3, 7): ++ # exception's repr has changed ++ _e = '' ++ else: ++ _e = ',' ++ + str_examples = [ +- ("MatchesException(Exception('foo',))", ++ ("MatchesException(Exception('foo'%s))" % _e, + MatchesException(Exception('foo'))) + ] + describe_examples = [ + ("%r is not a %r" % (Exception, ValueError), + error_base_foo, + MatchesException(ValueError("foo"))), +- ("ValueError('bar',) has different arguments to ValueError('foo',).", ++ ("ValueError('bar'%s) has different arguments to ValueError('foo'%s)." ++ % (_e, _e), + error_bar, + MatchesException(ValueError("foo"))), + ] diff --git a/gnu/packages/patches/python2-CVE-2018-1000802.patch b/gnu/packages/patches/python2-CVE-2018-1000802.patch new file mode 100644 index 0000000000..0d5bc77c84 --- /dev/null +++ b/gnu/packages/patches/python2-CVE-2018-1000802.patch @@ -0,0 +1,47 @@ +Fix CVE-2018-1000802: + +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2018-1000802 + +Taken from upstream commit (sans NEWS): +https://github.com/python/cpython/commit/d8b103b8b3ef9644805341216963a64098642435 + +diff --git a/Lib/shutil.py b/Lib/shutil.py +index 3462f7c5e9..0ab1a06f52 100644 +--- a/Lib/shutil.py ++++ b/Lib/shutil.py +@@ -413,17 +413,21 @@ def _make_tarball(base_name, base_dir, compress="gzip", verbose=0, dry_run=0, + + return archive_name + +-def _call_external_zip(base_dir, zip_filename, verbose=False, dry_run=False): ++def _call_external_zip(base_dir, zip_filename, verbose, dry_run, logger): + # XXX see if we want to keep an external call here + if verbose: + zipoptions = "-r" + else: + zipoptions = "-rq" +- from distutils.errors import DistutilsExecError +- from distutils.spawn import spawn ++ cmd = ["zip", zipoptions, zip_filename, base_dir] ++ if logger is not None: ++ logger.info(' '.join(cmd)) ++ if dry_run: ++ return ++ import subprocess + try: +- spawn(["zip", zipoptions, zip_filename, base_dir], dry_run=dry_run) +- except DistutilsExecError: ++ subprocess.check_call(cmd) ++ except subprocess.CalledProcessError: + # XXX really should distinguish between "couldn't find + # external 'zip' command" and "zip failed". + raise ExecError, \ +@@ -458,7 +462,7 @@ def _make_zipfile(base_name, base_dir, verbose=0, dry_run=0, logger=None): + zipfile = None + + if zipfile is None: +- _call_external_zip(base_dir, zip_filename, verbose, dry_run) ++ _call_external_zip(base_dir, zip_filename, verbose, dry_run, logger) + else: + if logger is not None: + logger.info("creating '%s' and adding '%s' to it", diff --git a/gnu/packages/patches/python2-CVE-2018-14647.patch b/gnu/packages/patches/python2-CVE-2018-14647.patch new file mode 100644 index 0000000000..6226b06aca --- /dev/null +++ b/gnu/packages/patches/python2-CVE-2018-14647.patch @@ -0,0 +1,61 @@ +Fix CVE-2018-14647: +https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2018-14647 +https://bugs.python.org/issue34623 + +Taken from upstream: +https://github.com/python/cpython/commit/18b20bad75b4ff0486940fba4ec680e96e70f3a2 + +diff --git a/Include/pyexpat.h b/Include/pyexpat.h +index 5340ef5fa3..3fc5fa54da 100644 +--- a/Include/pyexpat.h ++++ b/Include/pyexpat.h +@@ -3,7 +3,7 @@ + + /* note: you must import expat.h before importing this module! */ + +-#define PyExpat_CAPI_MAGIC "pyexpat.expat_CAPI 1.0" ++#define PyExpat_CAPI_MAGIC "pyexpat.expat_CAPI 1.1" + #define PyExpat_CAPSULE_NAME "pyexpat.expat_CAPI" + + struct PyExpat_CAPI +@@ -43,6 +43,8 @@ struct PyExpat_CAPI + XML_Parser parser, XML_UnknownEncodingHandler handler, + void *encodingHandlerData); + void (*SetUserData)(XML_Parser parser, void *userData); ++ /* might be none for expat < 2.1.0 */ ++ int (*SetHashSalt)(XML_Parser parser, unsigned long hash_salt); + /* always add new stuff to the end! */ + }; + +diff --git a/Modules/_elementtree.c b/Modules/_elementtree.c +index f7f992dd3a..b38e0ab329 100644 +--- a/Modules/_elementtree.c ++++ b/Modules/_elementtree.c +@@ -2574,6 +2574,11 @@ xmlparser(PyObject* self_, PyObject* args, PyObject* kw) + PyErr_NoMemory(); + return NULL; + } ++ /* expat < 2.1.0 has no XML_SetHashSalt() */ ++ if (EXPAT(SetHashSalt) != NULL) { ++ EXPAT(SetHashSalt)(self->parser, ++ (unsigned long)_Py_HashSecret.prefix); ++ } + + ALLOC(sizeof(XMLParserObject), "create expatparser"); + +diff --git a/Modules/pyexpat.c b/Modules/pyexpat.c +index 2b4d31293c..1f8c0d70a5 100644 +--- a/Modules/pyexpat.c ++++ b/Modules/pyexpat.c +@@ -2042,6 +2042,11 @@ MODULE_INITFUNC(void) + capi.SetProcessingInstructionHandler = XML_SetProcessingInstructionHandler; + capi.SetUnknownEncodingHandler = XML_SetUnknownEncodingHandler; + capi.SetUserData = XML_SetUserData; ++#if XML_COMBINED_VERSION >= 20100 ++ capi.SetHashSalt = XML_SetHashSalt; ++#else ++ capi.SetHashSalt = NULL; ++#endif + + /* export using capsule */ + capi_object = PyCapsule_New(&capi, PyExpat_CAPSULE_NAME, NULL); diff --git a/gnu/packages/patches/quilt-compat-getopt-fix-option-with-nondigit-param.patch b/gnu/packages/patches/quilt-compat-getopt-fix-option-with-nondigit-param.patch new file mode 100644 index 0000000000..6bbec67e75 --- /dev/null +++ b/gnu/packages/patches/quilt-compat-getopt-fix-option-with-nondigit-param.patch @@ -0,0 +1,45 @@ +From: Jean Delvare <jdelvare@suse.de> +Subject: compat/getopt: Allow non-digit parameter embedded in short option + +The compatibility getopt script allows only digit parameters to be +embedded in short options. Util-linux's getopt implementation does +not have such a restriction and allows any parameter to be embedded +in short options. As a consequence, using the compatibility getopt +script would choke for example on "-pab", which is a legal option +of the "quilt refresh" command. + +Remove the limitation on digits so that the compatibility getopt +script allows what util-linux allows. This fixes the second half +of bug #54772: +https://savannah.nongnu.org/bugs/index.php?54772 + +As a side note, this feature of the compatibility script was broken +anyway, as it would output the digits in reverse order. + +Signed-off-by: Jean Delvare <jdelvare@suse.de> +--- + compat/getopt.in | 13 ++++--------- + 1 file changed, 4 insertions(+), 9 deletions(-) + +--- quilt.orig/compat/getopt.in 2018-10-03 16:05:56.818667040 +0200 ++++ quilt/compat/getopt.in 2018-10-03 16:12:17.624841732 +0200 +@@ -108,15 +108,10 @@ foreach my $word (@words) { + if (scalar(@letters) == 0) { + $need_param = $letter; + } else { +- # short options can have numerical args +- # embedded in the short option list: -UO +- die "unexpected character after option $letter" +- if ($letters[$#letters] !~ /[0-9]/); +- my @digits; +- while (scalar(@letters) && ($letters[$#letters] =~ /[0-9]/)) { +- push @digits, pop @letters; +- } +- push @options, quote_word(join('', reverse @digits)); ++ # short options can have args ++ # embedded in the short option list ++ push @options, quote_word(join('', reverse @letters)); ++ @letters = (); + } + } + } diff --git a/gnu/packages/patches/quilt-compat-getopt-fix-second-separator.patch b/gnu/packages/patches/quilt-compat-getopt-fix-second-separator.patch new file mode 100644 index 0000000000..cde2c8d41c --- /dev/null +++ b/gnu/packages/patches/quilt-compat-getopt-fix-second-separator.patch @@ -0,0 +1,58 @@ +From: Jean Delvare <jdelvare@suse.de> +Subject: compat/getopt: Handle a second separator + +getopt can be passed 2 '--' separators. The first one tells that +getopt options are over and target program options start. The second +one tells that the target program's options are over and following +arguments should be treated as non-options even if they look like +options. + +This second separator was not handled, causing the compatibility +getopt script to treat the following arguments as options, eventually +failing one way or another. + +Properly detect and handle the second separator. This fixes the first +half of bug #54772: +https://savannah.nongnu.org/bugs/index.php?54772 + +Signed-off-by: Jean Delvare <jdelvare@suse.de> +--- + compat/getopt.in | 13 ++++++++++--- + 1 file changed, 10 insertions(+), 3 deletions(-) + +--- quilt.orig/compat/getopt.in 2018-10-03 15:23:21.147620172 +0200 ++++ quilt/compat/getopt.in 2018-10-03 16:05:56.818667040 +0200 +@@ -8,12 +8,12 @@ + + use strict; + +-my $opts; ++my $opts = ''; + my @words; + my $found_sep = 0; + + foreach my $arg (@ARGV) { +- if ($arg eq '--') { ++ if (!$found_sep && $arg eq '--') { + $found_sep = 1; + } + else { +@@ -62,10 +62,17 @@ sub quote_word + return "'$word'"; + } + ++# there can be a second separator, to inhibit processing following arguments ++# as options ++$found_sep = 0; + foreach my $word (@words) { ++ if ($word eq '--') { ++ $found_sep = 1; ++ next; ++ } + + # allow '-' to be an option value +- if (!$need_param && $word !~ /^-./) { ++ if ($found_sep || (!$need_param && $word !~ /^-./)) { + push @barewords, quote_word($word); + next; + } diff --git a/gnu/packages/patches/quilt-test-fix-regex.patch b/gnu/packages/patches/quilt-test-fix-regex.patch new file mode 100644 index 0000000000..2e249ac55b --- /dev/null +++ b/gnu/packages/patches/quilt-test-fix-regex.patch @@ -0,0 +1,41 @@ +From 5193b137b5a9034ce79946edd40760df2f63a82a Mon Sep 17 00:00:00 2001 +From: Jean Delvare <jdelvare@suse.de> +Date: Tue, 25 Apr 2017 15:17:53 +0200 +Subject: test: Escape curly braces in regex + +Curly braces in perl regex are supposed to be escaped, recent +versions of perl complain when they aren't: + +Unescaped left brace in regex is deprecated, passed through in regex; marked by <-- HERE in m/%{ <-- HERE (\w+)}/ at ./run line 114. +Unescaped left brace in regex is deprecated, passed through in regex; marked by <-- HERE in m/%{ <-- HERE \?}/ at ./run line 290. + +Signed-off-by: Jean Delvare <jdelvare@suse.de> +--- + test/run | 4 ++-- + 1 file changed, 2 insertions(+), 2 deletions(-) + +diff --git a/test/run b/test/run +index 942014e..03afc7a 100755 +--- a/test/run ++++ b/test/run +@@ -112,7 +112,7 @@ sub flush_output() + sub substitute_vars($) + { + my ($line) = @_; +- $line =~ s[%{(\w+)}][defined $ENV{$1} ? $ENV{$1} : ""]eg; ++ $line =~ s[%\{(\w+)\}][defined $ENV{$1} ? $ENV{$1} : ""]eg; + return $line; + } + +@@ -288,7 +288,7 @@ while (defined(my $line = <SOURCE>)) { + # Parse the next command + if ($line =~ s/^\s*\$ ?//) { + # Substitute %{?} with the last command's status +- $line =~ s[%{\?}][$last_status]eg; ++ $line =~ s[%\{\?\}][$last_status]eg; + + chomp($prog = substitute_vars($line)); + $prog_line = $lineno; +-- +cgit v1.0-41-gc330 + diff --git a/gnu/packages/patches/rsem-makefile.patch b/gnu/packages/patches/rsem-makefile.patch deleted file mode 100644 index 5481dc685f..0000000000 --- a/gnu/packages/patches/rsem-makefile.patch +++ /dev/null @@ -1,682 +0,0 @@ -This patch simplifies the Makefile, making it much easier to build rsem -without the bundled version of samtools. It has already been submitted -upstream: https://github.com/bli25wisc/RSEM/pull/11 - -From 161894e91a16c7e15af57e4fcfe8cb613711c7fa Mon Sep 17 00:00:00 2001 -From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> -Date: Wed, 22 Apr 2015 14:51:07 +0200 -Subject: [PATCH 1/7] remove all headers from Makefile - ---- - Makefile | 95 +++++++++++----------------------------------------------------- - 1 file changed, 16 insertions(+), 79 deletions(-) - -diff --git a/Makefile b/Makefile -index 54e2603..3a55ed8 100644 ---- a/Makefile -+++ b/Makefile -@@ -10,133 +10,70 @@ all : $(PROGRAMS) - sam/libbam.a : - cd sam ; ${MAKE} all - --Transcript.h : utils.h -- --Transcripts.h : utils.h my_assert.h Transcript.h -- --rsem-extract-reference-transcripts : utils.h my_assert.h GTFItem.h Transcript.h Transcripts.h extractRef.cpp -+rsem-extract-reference-transcripts : extractRef.cpp - $(CC) -Wall -O3 extractRef.cpp -o rsem-extract-reference-transcripts - --rsem-synthesis-reference-transcripts : utils.h my_assert.h Transcript.h Transcripts.h synthesisRef.cpp -+rsem-synthesis-reference-transcripts : synthesisRef.cpp - $(CC) -Wall -O3 synthesisRef.cpp -o rsem-synthesis-reference-transcripts - --BowtieRefSeqPolicy.h : RefSeqPolicy.h -- --RefSeq.h : utils.h -- --Refs.h : utils.h RefSeq.h RefSeqPolicy.h PolyARules.h -- -- - rsem-preref : preRef.o - $(CC) preRef.o -o rsem-preref - --preRef.o : utils.h RefSeq.h Refs.h PolyARules.h RefSeqPolicy.h AlignerRefSeqPolicy.h preRef.cpp -+preRef.o : preRef.cpp - $(CC) $(COFLAGS) preRef.cpp - -- --SingleRead.h : Read.h -- --SingleReadQ.h : Read.h -- --PairedEndRead.h : Read.h SingleRead.h -- --PairedEndReadQ.h : Read.h SingleReadQ.h -- -- --PairedEndHit.h : SingleHit.h -- --HitContainer.h : GroupInfo.h -- -- --SamParser.h : sam/sam.h sam/bam.h utils.h my_assert.h SingleRead.h SingleReadQ.h PairedEndRead.h PairedEndReadQ.h SingleHit.h PairedEndHit.h Transcripts.h -- -- - rsem-parse-alignments : parseIt.o sam/libbam.a - $(CC) -o rsem-parse-alignments parseIt.o sam/libbam.a -lz -lpthread - --parseIt.o : utils.h GroupInfo.h Read.h SingleRead.h SingleReadQ.h PairedEndRead.h PairedEndReadQ.h SingleHit.h PairedEndHit.h HitContainer.h SamParser.h Transcripts.h sam/sam.h sam/bam.h parseIt.cpp -+parseIt.o : parseIt.cpp - $(CC) -Wall -O2 -c -I. parseIt.cpp - -- --rsem-build-read-index : utils.h buildReadIndex.cpp -+rsem-build-read-index : buildReadIndex.cpp - $(CC) -O3 buildReadIndex.cpp -o rsem-build-read-index - -- --simul.h : boost/random.hpp -- --ReadReader.h : SingleRead.h SingleReadQ.h PairedEndRead.h PairedEndReadQ.h ReadIndex.h -- --SingleModel.h : utils.h my_assert.h Orientation.h LenDist.h RSPD.h Profile.h NoiseProfile.h ModelParams.h RefSeq.h Refs.h SingleRead.h SingleHit.h ReadReader.h simul.h -- --SingleQModel.h : utils.h my_assert.h Orientation.h LenDist.h RSPD.h QualDist.h QProfile.h NoiseQProfile.h ModelParams.h RefSeq.h Refs.h SingleReadQ.h SingleHit.h ReadReader.h simul.h -- --PairedEndModel.h : utils.h my_assert.h Orientation.h LenDist.h RSPD.h Profile.h NoiseProfile.h ModelParams.h RefSeq.h Refs.h SingleRead.h PairedEndRead.h PairedEndHit.h ReadReader.h simul.h -- --PairedEndQModel.h : utils.h my_assert.h Orientation.h LenDist.h RSPD.h QualDist.h QProfile.h NoiseQProfile.h ModelParams.h RefSeq.h Refs.h SingleReadQ.h PairedEndReadQ.h PairedEndHit.h ReadReader.h simul.h -- --HitWrapper.h : HitContainer.h -- --sam_rsem_aux.h : sam/bam.h -- --sam_rsem_cvt.h : sam/bam.h Transcript.h Transcripts.h -- --BamWriter.h : sam/sam.h sam/bam.h sam_rsem_aux.h sam_rsem_cvt.h SingleHit.h PairedEndHit.h HitWrapper.h Transcript.h Transcripts.h -- --sampling.h : boost/random.hpp -- --WriteResults.h : utils.h my_assert.h GroupInfo.h Transcript.h Transcripts.h RefSeq.h Refs.h Model.h SingleModel.h SingleQModel.h PairedEndModel.h PairedEndQModel.h -- - rsem-run-em : EM.o sam/libbam.a - $(CC) -o rsem-run-em EM.o sam/libbam.a -lz -lpthread - --EM.o : utils.h my_assert.h Read.h SingleRead.h SingleReadQ.h PairedEndRead.h PairedEndReadQ.h SingleHit.h PairedEndHit.h Model.h SingleModel.h SingleQModel.h PairedEndModel.h PairedEndQModel.h Refs.h GroupInfo.h HitContainer.h ReadIndex.h ReadReader.h Orientation.h LenDist.h RSPD.h QualDist.h QProfile.h NoiseQProfile.h ModelParams.h RefSeq.h RefSeqPolicy.h PolyARules.h Profile.h NoiseProfile.h Transcript.h Transcripts.h HitWrapper.h BamWriter.h sam/bam.h sam/sam.h simul.h sam_rsem_aux.h sampling.h boost/random.hpp WriteResults.h EM.cpp -+EM.o : EM.cpp - $(CC) $(COFLAGS) EM.cpp - --bc_aux.h : sam/bam.h -- --BamConverter.h : utils.h my_assert.h sam/sam.h sam/bam.h sam_rsem_aux.h sam_rsem_cvt.h bc_aux.h Transcript.h Transcripts.h -- --rsem-tbam2gbam : utils.h Transcripts.h Transcript.h bc_aux.h BamConverter.h sam/sam.h sam/bam.h sam/libbam.a sam_rsem_aux.h sam_rsem_cvt.h tbam2gbam.cpp sam/libbam.a -+rsem-tbam2gbam : tbam2gbam.cpp sam/libbam.a - $(CC) -O3 -Wall tbam2gbam.cpp sam/libbam.a -lz -lpthread -o $@ - --rsem-bam2wig : utils.h my_assert.h wiggle.h wiggle.o sam/libbam.a bam2wig.cpp -+rsem-bam2wig : wiggle.o sam/libbam.a bam2wig.cpp - $(CC) -O3 -Wall bam2wig.cpp wiggle.o sam/libbam.a -lz -lpthread -o $@ - --rsem-bam2readdepth : utils.h my_assert.h wiggle.h wiggle.o sam/libbam.a bam2readdepth.cpp -+rsem-bam2readdepth : wiggle.o sam/libbam.a bam2readdepth.cpp - $(CC) -O3 -Wall bam2readdepth.cpp wiggle.o sam/libbam.a -lz -lpthread -o $@ - --wiggle.o: sam/bam.h sam/sam.h wiggle.cpp wiggle.h -+wiggle.o: wiggle.cpp - $(CC) $(COFLAGS) wiggle.cpp - - rsem-simulate-reads : simulation.o - $(CC) -o rsem-simulate-reads simulation.o - --simulation.o : utils.h Read.h SingleRead.h SingleReadQ.h PairedEndRead.h PairedEndReadQ.h Model.h SingleModel.h SingleQModel.h PairedEndModel.h PairedEndQModel.h Refs.h RefSeq.h GroupInfo.h Transcript.h Transcripts.h Orientation.h LenDist.h RSPD.h QualDist.h QProfile.h NoiseQProfile.h Profile.h NoiseProfile.h simul.h boost/random.hpp WriteResults.h simulation.cpp -+simulation.o : simulation.cpp - $(CC) $(COFLAGS) simulation.cpp - - rsem-run-gibbs : Gibbs.o - $(CC) -o rsem-run-gibbs Gibbs.o -lpthread - --#some header files are omitted --Gibbs.o : utils.h my_assert.h boost/random.hpp sampling.h Model.h SingleModel.h SingleQModel.h PairedEndModel.h PairedEndQModel.h RefSeq.h RefSeqPolicy.h PolyARules.h Refs.h GroupInfo.h WriteResults.h Gibbs.cpp -+Gibbs.o : Gibbs.cpp - $(CC) $(COFLAGS) Gibbs.cpp - --Buffer.h : my_assert.h -- - rsem-calculate-credibility-intervals : calcCI.o - $(CC) -o rsem-calculate-credibility-intervals calcCI.o -lpthread - --#some header files are omitted --calcCI.o : utils.h my_assert.h boost/random.hpp sampling.h Model.h SingleModel.h SingleQModel.h PairedEndModel.h PairedEndQModel.h RefSeq.h RefSeqPolicy.h PolyARules.h Refs.h GroupInfo.h WriteResults.h Buffer.h calcCI.cpp -+calcCI.o : calcCI.cpp - $(CC) $(COFLAGS) calcCI.cpp - --rsem-get-unique : sam/bam.h sam/sam.h getUnique.cpp sam/libbam.a -+rsem-get-unique : getUnique.cpp sam/libbam.a - $(CC) -O3 -Wall getUnique.cpp sam/libbam.a -lz -lpthread -o $@ - --rsem-sam-validator : sam/bam.h sam/sam.h my_assert.h samValidator.cpp sam/libbam.a -+rsem-sam-validator : samValidator.cpp sam/libbam.a - $(CC) -O3 -Wall samValidator.cpp sam/libbam.a -lz -lpthread -o $@ - --rsem-scan-for-paired-end-reads : sam/bam.h sam/sam.h my_assert.h scanForPairedEndReads.cpp sam/libbam.a -+rsem-scan-for-paired-end-reads : scanForPairedEndReads.cpp sam/libbam.a - $(CC) -O3 -Wall scanForPairedEndReads.cpp sam/libbam.a -lz -lpthread -o $@ - - ebseq : - -From ec136638a727632e20abfaeb65c22c46d15ca8c4 Mon Sep 17 00:00:00 2001 -From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> -Date: Wed, 22 Apr 2015 15:06:41 +0200 -Subject: [PATCH 2/7] include current dir, ./sam and ./boost by default - ---- - Makefile | 48 ++++++++++++++++++++++++------------------------ - 1 file changed, 24 insertions(+), 24 deletions(-) - -diff --git a/Makefile b/Makefile -index 3a55ed8..1dd97ca 100644 ---- a/Makefile -+++ b/Makefile -@@ -1,6 +1,6 @@ - CC = g++ --CFLAGS = -Wall -c -I. --COFLAGS = -Wall -O3 -ffast-math -c -I. -+CFLAGS = -Wall -I. -I./sam -I./boost -+COFLAGS = -O3 -ffast-math -c - PROGRAMS = rsem-extract-reference-transcripts rsem-synthesis-reference-transcripts rsem-preref rsem-parse-alignments rsem-build-read-index rsem-run-em rsem-tbam2gbam rsem-run-gibbs rsem-calculate-credibility-intervals rsem-simulate-reads rsem-bam2wig rsem-get-unique rsem-bam2readdepth rsem-sam-validator rsem-scan-for-paired-end-reads - - .PHONY : all ebseq clean -@@ -11,70 +11,70 @@ sam/libbam.a : - cd sam ; ${MAKE} all - - rsem-extract-reference-transcripts : extractRef.cpp -- $(CC) -Wall -O3 extractRef.cpp -o rsem-extract-reference-transcripts -+ $(CC) $(CFLAGS) -O3 extractRef.cpp -o rsem-extract-reference-transcripts - - rsem-synthesis-reference-transcripts : synthesisRef.cpp -- $(CC) -Wall -O3 synthesisRef.cpp -o rsem-synthesis-reference-transcripts -+ $(CC) $(CFLAGS) -O3 synthesisRef.cpp -o rsem-synthesis-reference-transcripts - - rsem-preref : preRef.o -- $(CC) preRef.o -o rsem-preref -+ $(CC) $(CFLAGS) preRef.o -o rsem-preref - - preRef.o : preRef.cpp -- $(CC) $(COFLAGS) preRef.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) preRef.cpp - - rsem-parse-alignments : parseIt.o sam/libbam.a -- $(CC) -o rsem-parse-alignments parseIt.o sam/libbam.a -lz -lpthread -+ $(CC) $(CFLAGS) -o rsem-parse-alignments parseIt.o sam/libbam.a -lz -lpthread - - parseIt.o : parseIt.cpp -- $(CC) -Wall -O2 -c -I. parseIt.cpp -+ $(CC) $(CFLAGS) -O2 -c parseIt.cpp - - rsem-build-read-index : buildReadIndex.cpp -- $(CC) -O3 buildReadIndex.cpp -o rsem-build-read-index -+ $(CC) $(CFLAGS) -O3 buildReadIndex.cpp -o rsem-build-read-index - - rsem-run-em : EM.o sam/libbam.a -- $(CC) -o rsem-run-em EM.o sam/libbam.a -lz -lpthread -+ $(CC) $(CFLAGS) -o rsem-run-em EM.o sam/libbam.a -lz -lpthread - - EM.o : EM.cpp -- $(CC) $(COFLAGS) EM.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) EM.cpp - - rsem-tbam2gbam : tbam2gbam.cpp sam/libbam.a -- $(CC) -O3 -Wall tbam2gbam.cpp sam/libbam.a -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 tbam2gbam.cpp sam/libbam.a -lz -lpthread -o $@ - - rsem-bam2wig : wiggle.o sam/libbam.a bam2wig.cpp -- $(CC) -O3 -Wall bam2wig.cpp wiggle.o sam/libbam.a -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 bam2wig.cpp wiggle.o sam/libbam.a -lz -lpthread -o $@ - - rsem-bam2readdepth : wiggle.o sam/libbam.a bam2readdepth.cpp -- $(CC) -O3 -Wall bam2readdepth.cpp wiggle.o sam/libbam.a -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 bam2readdepth.cpp wiggle.o sam/libbam.a -lz -lpthread -o $@ - - wiggle.o: wiggle.cpp -- $(CC) $(COFLAGS) wiggle.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) wiggle.cpp - - rsem-simulate-reads : simulation.o -- $(CC) -o rsem-simulate-reads simulation.o -+ $(CC) $(CFLAGS) -o rsem-simulate-reads simulation.o - - simulation.o : simulation.cpp -- $(CC) $(COFLAGS) simulation.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) simulation.cpp - - rsem-run-gibbs : Gibbs.o -- $(CC) -o rsem-run-gibbs Gibbs.o -lpthread -+ $(CC) $(CFLAGS) -o rsem-run-gibbs Gibbs.o -lpthread - - Gibbs.o : Gibbs.cpp -- $(CC) $(COFLAGS) Gibbs.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) Gibbs.cpp - - rsem-calculate-credibility-intervals : calcCI.o -- $(CC) -o rsem-calculate-credibility-intervals calcCI.o -lpthread -+ $(CC) $(CFLAGS) -o rsem-calculate-credibility-intervals calcCI.o -lpthread - - calcCI.o : calcCI.cpp -- $(CC) $(COFLAGS) calcCI.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) calcCI.cpp - - rsem-get-unique : getUnique.cpp sam/libbam.a -- $(CC) -O3 -Wall getUnique.cpp sam/libbam.a -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 getUnique.cpp sam/libbam.a -lz -lpthread -o $@ - - rsem-sam-validator : samValidator.cpp sam/libbam.a -- $(CC) -O3 -Wall samValidator.cpp sam/libbam.a -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 samValidator.cpp sam/libbam.a -lz -lpthread -o $@ - - rsem-scan-for-paired-end-reads : scanForPairedEndReads.cpp sam/libbam.a -- $(CC) -O3 -Wall scanForPairedEndReads.cpp sam/libbam.a -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 scanForPairedEndReads.cpp sam/libbam.a -lz -lpthread -o $@ - - ebseq : - cd EBSeq ; ${MAKE} all - -From d366614ea50f79fdd93e3c76383ccb6fcdeaa8e0 Mon Sep 17 00:00:00 2001 -From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> -Date: Wed, 22 Apr 2015 15:10:49 +0200 -Subject: [PATCH 3/7] separate object rules from rules for executables - ---- - Makefile | 50 ++++++++++++++++++++++++++------------------------ - 1 file changed, 26 insertions(+), 24 deletions(-) - -diff --git a/Makefile b/Makefile -index 1dd97ca..ae4de3b 100644 ---- a/Makefile -+++ b/Makefile -@@ -10,6 +10,32 @@ all : $(PROGRAMS) - sam/libbam.a : - cd sam ; ${MAKE} all - -+ebseq : -+ cd EBSeq ; ${MAKE} all -+ -+ -+calcCI.o : calcCI.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) calcCI.cpp -+ -+EM.o : EM.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) EM.cpp -+ -+Gibbs.o : Gibbs.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) Gibbs.cpp -+ -+preRef.o : preRef.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) preRef.cpp -+ -+parseIt.o : parseIt.cpp -+ $(CC) $(CFLAGS) -O2 -c parseIt.cpp -+ -+simulation.o : simulation.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) simulation.cpp -+ -+wiggle.o: wiggle.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) wiggle.cpp -+ -+ - rsem-extract-reference-transcripts : extractRef.cpp - $(CC) $(CFLAGS) -O3 extractRef.cpp -o rsem-extract-reference-transcripts - -@@ -19,24 +45,15 @@ rsem-synthesis-reference-transcripts : synthesisRef.cpp - rsem-preref : preRef.o - $(CC) $(CFLAGS) preRef.o -o rsem-preref - --preRef.o : preRef.cpp -- $(CC) $(CFLAGS) $(COFLAGS) preRef.cpp -- - rsem-parse-alignments : parseIt.o sam/libbam.a - $(CC) $(CFLAGS) -o rsem-parse-alignments parseIt.o sam/libbam.a -lz -lpthread - --parseIt.o : parseIt.cpp -- $(CC) $(CFLAGS) -O2 -c parseIt.cpp -- - rsem-build-read-index : buildReadIndex.cpp - $(CC) $(CFLAGS) -O3 buildReadIndex.cpp -o rsem-build-read-index - - rsem-run-em : EM.o sam/libbam.a - $(CC) $(CFLAGS) -o rsem-run-em EM.o sam/libbam.a -lz -lpthread - --EM.o : EM.cpp -- $(CC) $(CFLAGS) $(COFLAGS) EM.cpp -- - rsem-tbam2gbam : tbam2gbam.cpp sam/libbam.a - $(CC) $(CFLAGS) -O3 tbam2gbam.cpp sam/libbam.a -lz -lpthread -o $@ - -@@ -46,27 +63,15 @@ rsem-bam2wig : wiggle.o sam/libbam.a bam2wig.cpp - rsem-bam2readdepth : wiggle.o sam/libbam.a bam2readdepth.cpp - $(CC) $(CFLAGS) -O3 bam2readdepth.cpp wiggle.o sam/libbam.a -lz -lpthread -o $@ - --wiggle.o: wiggle.cpp -- $(CC) $(CFLAGS) $(COFLAGS) wiggle.cpp -- - rsem-simulate-reads : simulation.o - $(CC) $(CFLAGS) -o rsem-simulate-reads simulation.o - --simulation.o : simulation.cpp -- $(CC) $(CFLAGS) $(COFLAGS) simulation.cpp -- - rsem-run-gibbs : Gibbs.o - $(CC) $(CFLAGS) -o rsem-run-gibbs Gibbs.o -lpthread - --Gibbs.o : Gibbs.cpp -- $(CC) $(CFLAGS) $(COFLAGS) Gibbs.cpp -- - rsem-calculate-credibility-intervals : calcCI.o - $(CC) $(CFLAGS) -o rsem-calculate-credibility-intervals calcCI.o -lpthread - --calcCI.o : calcCI.cpp -- $(CC) $(CFLAGS) $(COFLAGS) calcCI.cpp -- - rsem-get-unique : getUnique.cpp sam/libbam.a - $(CC) $(CFLAGS) -O3 getUnique.cpp sam/libbam.a -lz -lpthread -o $@ - -@@ -76,9 +81,6 @@ rsem-sam-validator : samValidator.cpp sam/libbam.a - rsem-scan-for-paired-end-reads : scanForPairedEndReads.cpp sam/libbam.a - $(CC) $(CFLAGS) -O3 scanForPairedEndReads.cpp sam/libbam.a -lz -lpthread -o $@ - --ebseq : -- cd EBSeq ; ${MAKE} all -- - clean : - rm -f *.o *~ $(PROGRAMS) - cd sam ; ${MAKE} clean - -From 6ba1c33cccdf7c8e7df7a3189e7db204be3b1e8d Mon Sep 17 00:00:00 2001 -From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> -Date: Wed, 22 Apr 2015 15:28:30 +0200 -Subject: [PATCH 4/7] add ./sam to library directories, link with -lbam - ---- - Makefile | 36 ++++++++++++++++++------------------ - 1 file changed, 18 insertions(+), 18 deletions(-) - -diff --git a/Makefile b/Makefile -index ae4de3b..a87cc4d 100644 ---- a/Makefile -+++ b/Makefile -@@ -1,11 +1,11 @@ - CC = g++ --CFLAGS = -Wall -I. -I./sam -I./boost -+CFLAGS = -Wall -I. -I./sam -I./boost -L./sam - COFLAGS = -O3 -ffast-math -c - PROGRAMS = rsem-extract-reference-transcripts rsem-synthesis-reference-transcripts rsem-preref rsem-parse-alignments rsem-build-read-index rsem-run-em rsem-tbam2gbam rsem-run-gibbs rsem-calculate-credibility-intervals rsem-simulate-reads rsem-bam2wig rsem-get-unique rsem-bam2readdepth rsem-sam-validator rsem-scan-for-paired-end-reads - - .PHONY : all ebseq clean - --all : $(PROGRAMS) -+all : sam/libbam.a $(PROGRAMS) - - sam/libbam.a : - cd sam ; ${MAKE} all -@@ -45,23 +45,23 @@ rsem-synthesis-reference-transcripts : synthesisRef.cpp - rsem-preref : preRef.o - $(CC) $(CFLAGS) preRef.o -o rsem-preref - --rsem-parse-alignments : parseIt.o sam/libbam.a -- $(CC) $(CFLAGS) -o rsem-parse-alignments parseIt.o sam/libbam.a -lz -lpthread -+rsem-parse-alignments : parseIt.o -+ $(CC) $(CFLAGS) -o rsem-parse-alignments parseIt.o -lbam -lz -lpthread - - rsem-build-read-index : buildReadIndex.cpp - $(CC) $(CFLAGS) -O3 buildReadIndex.cpp -o rsem-build-read-index - --rsem-run-em : EM.o sam/libbam.a -- $(CC) $(CFLAGS) -o rsem-run-em EM.o sam/libbam.a -lz -lpthread -+rsem-run-em : EM.o -+ $(CC) $(CFLAGS) -o rsem-run-em EM.o -lbam -lz -lpthread - --rsem-tbam2gbam : tbam2gbam.cpp sam/libbam.a -- $(CC) $(CFLAGS) -O3 tbam2gbam.cpp sam/libbam.a -lz -lpthread -o $@ -+rsem-tbam2gbam : tbam2gbam.cpp -+ $(CC) $(CFLAGS) -O3 tbam2gbam.cpp -lbam -lz -lpthread -o $@ - --rsem-bam2wig : wiggle.o sam/libbam.a bam2wig.cpp -- $(CC) $(CFLAGS) -O3 bam2wig.cpp wiggle.o sam/libbam.a -lz -lpthread -o $@ -+rsem-bam2wig : wiggle.o bam2wig.cpp -+ $(CC) $(CFLAGS) -O3 bam2wig.cpp wiggle.o -lbam -lz -lpthread -o $@ - --rsem-bam2readdepth : wiggle.o sam/libbam.a bam2readdepth.cpp -- $(CC) $(CFLAGS) -O3 bam2readdepth.cpp wiggle.o sam/libbam.a -lz -lpthread -o $@ -+rsem-bam2readdepth : wiggle.o bam2readdepth.cpp -+ $(CC) $(CFLAGS) -O3 bam2readdepth.cpp wiggle.o -lbam -lz -lpthread -o $@ - - rsem-simulate-reads : simulation.o - $(CC) $(CFLAGS) -o rsem-simulate-reads simulation.o -@@ -72,14 +72,14 @@ rsem-run-gibbs : Gibbs.o - rsem-calculate-credibility-intervals : calcCI.o - $(CC) $(CFLAGS) -o rsem-calculate-credibility-intervals calcCI.o -lpthread - --rsem-get-unique : getUnique.cpp sam/libbam.a -- $(CC) $(CFLAGS) -O3 getUnique.cpp sam/libbam.a -lz -lpthread -o $@ -+rsem-get-unique : getUnique.cpp -+ $(CC) $(CFLAGS) -O3 getUnique.cpp -lbam -lz -lpthread -o $@ - --rsem-sam-validator : samValidator.cpp sam/libbam.a -- $(CC) $(CFLAGS) -O3 samValidator.cpp sam/libbam.a -lz -lpthread -o $@ -+rsem-sam-validator : samValidator.cpp -+ $(CC) $(CFLAGS) -O3 samValidator.cpp -lbam -lz -lpthread -o $@ - --rsem-scan-for-paired-end-reads : scanForPairedEndReads.cpp sam/libbam.a -- $(CC) $(CFLAGS) -O3 scanForPairedEndReads.cpp sam/libbam.a -lz -lpthread -o $@ -+rsem-scan-for-paired-end-reads : scanForPairedEndReads.cpp -+ $(CC) $(CFLAGS) -O3 scanForPairedEndReads.cpp -lbam -lz -lpthread -o $@ - - clean : - rm -f *.o *~ $(PROGRAMS) - -From 5402b88c269df79ee245c1c59e15f3c8282a0220 Mon Sep 17 00:00:00 2001 -From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> -Date: Wed, 22 Apr 2015 15:33:02 +0200 -Subject: [PATCH 5/7] do not repeat target name, use $@ instead - ---- - Makefile | 18 +++++++++--------- - 1 file changed, 9 insertions(+), 9 deletions(-) - -diff --git a/Makefile b/Makefile -index a87cc4d..7ec90a3 100644 ---- a/Makefile -+++ b/Makefile -@@ -37,22 +37,22 @@ wiggle.o: wiggle.cpp - - - rsem-extract-reference-transcripts : extractRef.cpp -- $(CC) $(CFLAGS) -O3 extractRef.cpp -o rsem-extract-reference-transcripts -+ $(CC) $(CFLAGS) -O3 extractRef.cpp -o $@ - - rsem-synthesis-reference-transcripts : synthesisRef.cpp -- $(CC) $(CFLAGS) -O3 synthesisRef.cpp -o rsem-synthesis-reference-transcripts -+ $(CC) $(CFLAGS) -O3 synthesisRef.cpp -o $@ - - rsem-preref : preRef.o -- $(CC) $(CFLAGS) preRef.o -o rsem-preref -+ $(CC) $(CFLAGS) preRef.o -o $@ - - rsem-parse-alignments : parseIt.o -- $(CC) $(CFLAGS) -o rsem-parse-alignments parseIt.o -lbam -lz -lpthread -+ $(CC) $(CFLAGS) -o $@ parseIt.o -lbam -lz -lpthread - - rsem-build-read-index : buildReadIndex.cpp -- $(CC) $(CFLAGS) -O3 buildReadIndex.cpp -o rsem-build-read-index -+ $(CC) $(CFLAGS) -O3 buildReadIndex.cpp -o $@ - - rsem-run-em : EM.o -- $(CC) $(CFLAGS) -o rsem-run-em EM.o -lbam -lz -lpthread -+ $(CC) $(CFLAGS) -o $@ EM.o -lbam -lz -lpthread - - rsem-tbam2gbam : tbam2gbam.cpp - $(CC) $(CFLAGS) -O3 tbam2gbam.cpp -lbam -lz -lpthread -o $@ -@@ -64,13 +64,13 @@ rsem-bam2readdepth : wiggle.o bam2readdepth.cpp - $(CC) $(CFLAGS) -O3 bam2readdepth.cpp wiggle.o -lbam -lz -lpthread -o $@ - - rsem-simulate-reads : simulation.o -- $(CC) $(CFLAGS) -o rsem-simulate-reads simulation.o -+ $(CC) $(CFLAGS) -o $@ simulation.o - - rsem-run-gibbs : Gibbs.o -- $(CC) $(CFLAGS) -o rsem-run-gibbs Gibbs.o -lpthread -+ $(CC) $(CFLAGS) -o $@ Gibbs.o -lpthread - - rsem-calculate-credibility-intervals : calcCI.o -- $(CC) $(CFLAGS) -o rsem-calculate-credibility-intervals calcCI.o -lpthread -+ $(CC) $(CFLAGS) -o $@ calcCI.o -lpthread - - rsem-get-unique : getUnique.cpp - $(CC) $(CFLAGS) -O3 getUnique.cpp -lbam -lz -lpthread -o $@ - -From f60784bc7aa303cc825bd87dd3f5d7d26c51bded Mon Sep 17 00:00:00 2001 -From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> -Date: Wed, 22 Apr 2015 15:44:53 +0200 -Subject: [PATCH 6/7] use automatic variables to refer to prerequisites - ---- - Makefile | 44 ++++++++++++++++++++++---------------------- - 1 file changed, 22 insertions(+), 22 deletions(-) - -diff --git a/Makefile b/Makefile -index 7ec90a3..6540d81 100644 ---- a/Makefile -+++ b/Makefile -@@ -15,71 +15,71 @@ ebseq : - - - calcCI.o : calcCI.cpp -- $(CC) $(CFLAGS) $(COFLAGS) calcCI.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) $< - - EM.o : EM.cpp -- $(CC) $(CFLAGS) $(COFLAGS) EM.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) $< - - Gibbs.o : Gibbs.cpp -- $(CC) $(CFLAGS) $(COFLAGS) Gibbs.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) $< - - preRef.o : preRef.cpp -- $(CC) $(CFLAGS) $(COFLAGS) preRef.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) $< - - parseIt.o : parseIt.cpp -- $(CC) $(CFLAGS) -O2 -c parseIt.cpp -+ $(CC) $(CFLAGS) -O2 -c $< - - simulation.o : simulation.cpp -- $(CC) $(CFLAGS) $(COFLAGS) simulation.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) $< - - wiggle.o: wiggle.cpp -- $(CC) $(CFLAGS) $(COFLAGS) wiggle.cpp -+ $(CC) $(CFLAGS) $(COFLAGS) $< - - - rsem-extract-reference-transcripts : extractRef.cpp -- $(CC) $(CFLAGS) -O3 extractRef.cpp -o $@ -+ $(CC) $(CFLAGS) -O3 $< -o $@ - - rsem-synthesis-reference-transcripts : synthesisRef.cpp -- $(CC) $(CFLAGS) -O3 synthesisRef.cpp -o $@ -+ $(CC) $(CFLAGS) -O3 $< -o $@ - - rsem-preref : preRef.o -- $(CC) $(CFLAGS) preRef.o -o $@ -+ $(CC) $(CFLAGS) $< -o $@ - - rsem-parse-alignments : parseIt.o -- $(CC) $(CFLAGS) -o $@ parseIt.o -lbam -lz -lpthread -+ $(CC) $(CFLAGS) -o $@ $< -lbam -lz -lpthread - - rsem-build-read-index : buildReadIndex.cpp -- $(CC) $(CFLAGS) -O3 buildReadIndex.cpp -o $@ -+ $(CC) $(CFLAGS) -O3 $< -o $@ - - rsem-run-em : EM.o -- $(CC) $(CFLAGS) -o $@ EM.o -lbam -lz -lpthread -+ $(CC) $(CFLAGS) -o $@ $< -lbam -lz -lpthread - - rsem-tbam2gbam : tbam2gbam.cpp -- $(CC) $(CFLAGS) -O3 tbam2gbam.cpp -lbam -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 $< -lbam -lz -lpthread -o $@ - - rsem-bam2wig : wiggle.o bam2wig.cpp -- $(CC) $(CFLAGS) -O3 bam2wig.cpp wiggle.o -lbam -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 $^ -lbam -lz -lpthread -o $@ - - rsem-bam2readdepth : wiggle.o bam2readdepth.cpp -- $(CC) $(CFLAGS) -O3 bam2readdepth.cpp wiggle.o -lbam -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 $^ -lbam -lz -lpthread -o $@ - - rsem-simulate-reads : simulation.o -- $(CC) $(CFLAGS) -o $@ simulation.o -+ $(CC) $(CFLAGS) -o $@ $< - - rsem-run-gibbs : Gibbs.o -- $(CC) $(CFLAGS) -o $@ Gibbs.o -lpthread -+ $(CC) $(CFLAGS) -o $@ $< -lpthread - - rsem-calculate-credibility-intervals : calcCI.o -- $(CC) $(CFLAGS) -o $@ calcCI.o -lpthread -+ $(CC) $(CFLAGS) -o $@ $< -lpthread - - rsem-get-unique : getUnique.cpp -- $(CC) $(CFLAGS) -O3 getUnique.cpp -lbam -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 $< -lbam -lz -lpthread -o $@ - - rsem-sam-validator : samValidator.cpp -- $(CC) $(CFLAGS) -O3 samValidator.cpp -lbam -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 $< -lbam -lz -lpthread -o $@ - - rsem-scan-for-paired-end-reads : scanForPairedEndReads.cpp -- $(CC) $(CFLAGS) -O3 scanForPairedEndReads.cpp -lbam -lz -lpthread -o $@ -+ $(CC) $(CFLAGS) -O3 $< -lbam -lz -lpthread -o $@ - - clean : - rm -f *.o *~ $(PROGRAMS) - -From 0cf9721077f67fb4ca15fdc59cbfbf24a944debd Mon Sep 17 00:00:00 2001 -From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> -Date: Wed, 22 Apr 2015 15:49:19 +0200 -Subject: [PATCH 7/7] split long line - ---- - Makefile | 17 ++++++++++++++++- - 1 file changed, 16 insertions(+), 1 deletion(-) - -diff --git a/Makefile b/Makefile -index 6540d81..0ab04a5 100644 ---- a/Makefile -+++ b/Makefile -@@ -1,7 +1,22 @@ - CC = g++ - CFLAGS = -Wall -I. -I./sam -I./boost -L./sam - COFLAGS = -O3 -ffast-math -c --PROGRAMS = rsem-extract-reference-transcripts rsem-synthesis-reference-transcripts rsem-preref rsem-parse-alignments rsem-build-read-index rsem-run-em rsem-tbam2gbam rsem-run-gibbs rsem-calculate-credibility-intervals rsem-simulate-reads rsem-bam2wig rsem-get-unique rsem-bam2readdepth rsem-sam-validator rsem-scan-for-paired-end-reads -+PROGRAMS = \ -+ rsem-extract-reference-transcripts \ -+ rsem-synthesis-reference-transcripts \ -+ rsem-preref \ -+ rsem-parse-alignments \ -+ rsem-build-read-index \ -+ rsem-run-em \ -+ rsem-tbam2gbam \ -+ rsem-run-gibbs \ -+ rsem-calculate-credibility-intervals \ -+ rsem-simulate-reads \ -+ rsem-bam2wig \ -+ rsem-get-unique \ -+ rsem-bam2readdepth \ -+ rsem-sam-validator \ -+ rsem-scan-for-paired-end-reads - - .PHONY : all ebseq clean - diff --git a/gnu/packages/patches/soundconverter-remove-gconf-dependency.patch b/gnu/packages/patches/soundconverter-remove-gconf-dependency.patch new file mode 100644 index 0000000000..f065b9a3d4 --- /dev/null +++ b/gnu/packages/patches/soundconverter-remove-gconf-dependency.patch @@ -0,0 +1,83 @@ +From: Sebastian Ramacher <sebastian@ramacher.at> +Date: Fri, 6 Apr 2018 13:25:35 +0200 +Subject: Only fetch profiles if GConf is still available + +--- + bin/soundconverter.py | 1 - + soundconverter/gstreamer.py | 44 ++++++++++++++++++++++++-------------------- + 2 files changed, 24 insertions(+), 21 deletions(-) + +diff --git a/bin/soundconverter.py b/bin/soundconverter.py +index 39055ce..5198443 100644 +--- a/bin/soundconverter.py ++++ b/bin/soundconverter.py +@@ -66,7 +66,6 @@ def _check_libs(): + import gi + gi.require_version('Gst', '1.0') + gi.require_version('Gtk', '3.0') +- gi.require_version('GConf', '2.0') + from gi.repository import GObject + # force GIL creation - see https://bugzilla.gnome.org/show_bug.cgi?id=710447 + import threading +diff --git a/soundconverter/gstreamer.py b/soundconverter/gstreamer.py +index 23aaa9b..211b052 100644 +--- a/soundconverter/gstreamer.py ++++ b/soundconverter/gstreamer.py +@@ -25,7 +25,7 @@ from urllib.parse import urlparse + from gettext import gettext as _ + + import gi +-from gi.repository import Gst, Gtk, GObject, GConf, Gio ++from gi.repository import Gst, Gtk, GObject, Gio + + from soundconverter.fileoperations import vfs_encode_filename, file_encode_filename + from soundconverter.fileoperations import unquote_filename, vfs_makedirs, vfs_unlink +@@ -66,25 +66,29 @@ _GCONF_PROFILE_LIST_PATH = "/system/gstreamer/1.0/audio/global/profile_list" + audio_profiles_list = [] + audio_profiles_dict = {} + +-_GCONF = GConf.Client.get_default() +-profiles = _GCONF.all_dirs(_GCONF_PROFILE_LIST_PATH) +-for name in profiles: +- if _GCONF.get_bool(_GCONF_PROFILE_PATH + name + "/active"): +- # get profile +- description = _GCONF.get_string(_GCONF_PROFILE_PATH + name + "/name") +- extension = _GCONF.get_string(_GCONF_PROFILE_PATH + name + "/extension") +- pipeline = _GCONF.get_string(_GCONF_PROFILE_PATH + name + "/pipeline") +- # check profile validity +- if not extension or not pipeline: +- continue +- if not description: +- description = extension +- if description in audio_profiles_dict: +- continue +- # store +- profile = description, extension, pipeline +- audio_profiles_list.append(profile) +- audio_profiles_dict[description] = profile ++try: ++ from gi.repository import GConf ++ _GCONF = GConf.Client.get_default() ++ profiles = _GCONF.all_dirs(_GCONF_PROFILE_LIST_PATH) ++ for name in profiles: ++ if _GCONF.get_bool(_GCONF_PROFILE_PATH + name + "/active"): ++ # get profile ++ description = _GCONF.get_string(_GCONF_PROFILE_PATH + name + "/name") ++ extension = _GCONF.get_string(_GCONF_PROFILE_PATH + name + "/extension") ++ pipeline = _GCONF.get_string(_GCONF_PROFILE_PATH + name + "/pipeline") ++ # check profile validity ++ if not extension or not pipeline: ++ continue ++ if not description: ++ description = extension ++ if description in audio_profiles_dict: ++ continue ++ # store ++ profile = description, extension, pipeline ++ audio_profiles_list.append(profile) ++ audio_profiles_dict[description] = profile ++except ImportError: ++ pass + + required_elements = ('decodebin', 'fakesink', 'audioconvert', 'typefind', 'audiorate') + for element in required_elements: diff --git a/gnu/packages/patches/swig-guile-gc.patch b/gnu/packages/patches/swig-guile-gc.patch new file mode 100644 index 0000000000..0e745a6247 --- /dev/null +++ b/gnu/packages/patches/swig-guile-gc.patch @@ -0,0 +1,76 @@ +Fix garbage collection for Guile versions >= 2.0.12. This issue showed +up when running the tests on i686-linux. + +Taken from this upstream commit: +https://github.com/swig/swig/commit/38f2ab0c30e369e63bbd0a6152108488d0de68e1 + +diff --git a/Lib/guile/guile_scm_run.swg b/Lib/guile/guile_scm_run.swg +index 274f197158..0d04cb7c62 100644 +--- a/Lib/guile/guile_scm_run.swg ++++ b/Lib/guile/guile_scm_run.swg +@@ -99,6 +99,7 @@ SWIG_Guile_scm2newstr(SCM str, size_t *len) { + static int swig_initialized = 0; + static scm_t_bits swig_tag = 0; + static scm_t_bits swig_collectable_tag = 0; ++static scm_t_bits swig_finalized_tag = 0; + static scm_t_bits swig_destroyed_tag = 0; + static scm_t_bits swig_member_function_tag = 0; + static SCM swig_make_func = SCM_EOL; +@@ -163,7 +164,19 @@ SWIG_Guile_PointerType(SCM object) + } + else scm_wrong_type_arg("SWIG-Guile-PointerType", 1, object); + } +- ++ ++SWIGINTERN int ++SWIG_Guile_IsValidSmob(SCM smob) ++{ ++ /* We do not accept smobs representing destroyed pointers, but we have to ++ allow finalized smobs because Guile >= 2.0.12 sets all smob instances ++ to the 'finalized' type before calling their 'free' function. This change ++ was introduced to Guile in commit 8dff3af087c6eaa83ae0d72aa8b22aef5c65d65d */ ++ return SCM_SMOB_PREDICATE(swig_tag, smob) ++ || SCM_SMOB_PREDICATE(swig_collectable_tag, smob) ++ || SCM_SMOB_PREDICATE(swig_finalized_tag, smob); ++} ++ + SWIGINTERN int + SWIG_Guile_ConvertPtr(SCM s, void **result, swig_type_info *type, int flags) + { +@@ -179,8 +192,7 @@ SWIG_Guile_ConvertPtr(SCM s, void **result, swig_type_info *type, int flags) + *result = SCM_POINTER_VALUE(s); + return SWIG_OK; + #endif /* if SCM_MAJOR_VERSION >= 2 */ +- } else if (SCM_SMOB_PREDICATE(swig_tag, smob) || SCM_SMOB_PREDICATE(swig_collectable_tag, smob)) { +- /* we do not accept smobs representing destroyed pointers */ ++ } else if (SWIG_Guile_IsValidSmob(smob)) { + from = (swig_type_info *) SCM_CELL_WORD_2(smob); + if (!from) return SWIG_ERROR; + if (type) { +@@ -239,7 +251,7 @@ SWIG_Guile_MarkPointerNoncollectable(SCM s) + { + SCM smob = SWIG_Guile_GetSmob(s); + if (!SCM_NULLP(smob)) { +- if (SCM_SMOB_PREDICATE(swig_tag, smob) || SCM_SMOB_PREDICATE(swig_collectable_tag, smob)) { ++ if (SWIG_Guile_IsValidSmob(smob)) { + SCM_SET_CELL_TYPE(smob, swig_tag); + } + else scm_wrong_type_arg(NULL, 0, s); +@@ -252,7 +264,7 @@ SWIG_Guile_MarkPointerDestroyed(SCM s) + { + SCM smob = SWIG_Guile_GetSmob(s); + if (!SCM_NULLP(smob)) { +- if (SCM_SMOB_PREDICATE(swig_tag, smob) || SCM_SMOB_PREDICATE(swig_collectable_tag, smob)) { ++ if (SWIG_Guile_IsValidSmob(smob)) { + SCM_SET_CELL_TYPE(smob, swig_destroyed_tag); + } + else scm_wrong_type_arg(NULL, 0, s); +@@ -419,6 +431,8 @@ SWIG_Guile_Init () + scm_set_smob_print(swig_collectable_tag, print_collectable_swig); + scm_set_smob_equalp(swig_collectable_tag, equalp_swig); + scm_set_smob_free(swig_collectable_tag, free_swig); ++ /* For Guile >= 2.0.12. See libguile/smob.c:clear_smobnum */ ++ swig_finalized_tag = swig_collectable_tag & ~0xff00; + } + if (ensure_smob_tag(swig_module, &swig_destroyed_tag, + "destroyed-swig-pointer", "destroyed-swig-pointer-tag")) { diff --git a/gnu/packages/patches/x265-arm-asm-primitives.patch b/gnu/packages/patches/x265-arm-asm-primitives.patch deleted file mode 100644 index f49aafe577..0000000000 --- a/gnu/packages/patches/x265-arm-asm-primitives.patch +++ /dev/null @@ -1,360 +0,0 @@ -From <https://git.busybox.net/buildroot/tree/package/x265/0003-arm-asm-primitives.patch?id=57d4a27eaf1a9e59d767c321e7b7500c5060a2ac>. -This fixes build errors like: - - cd /tmp/guix-build-x265-2.8.drv-0/x265_2.8/build/encoder && /gnu/store/cd5q2pni1d95fs3cdabbclyh9hqhw2nq-gcc-5.5.0/bin/c++ -DEXPORT_C_API=1 -DHAVE_ARMV6=1 -DHAVE_INT_TYPES_H=1 -DHAVE_NEON -DHIGH_BIT_DEPTH=0 -DX265_ARCH_ARM=1 -DX265_DEPTH=8 -DX265_NS=x265 -D__STDC_LIMIT_MACROS=1 -I/tmp/guix-build-x265-2.8.drv-0/x265_2.8/source/. -I/tmp/guix-build-x265-2.8.drv-0/x265_2.8/source/common -I/tmp/guix-build-x265-2.8.drv-0/x265_2.8/source/encoder -I/tmp/guix-build-x265-2.8.drv-0/x265_2.8/build -O2 -g -DNDEBUG -Wall -Wextra -Wshadow -std=gnu++98 -fPIC -mcpu=native -mfloat-abi=hard -mfpu=neon -marm -fPIC -Wno-array-bounds -ffast-math -fno-exceptions -Wno-uninitialized -o CMakeFiles/encoder.dir/search.cpp.o -c /tmp/guix-build-x265-2.8.drv-0/x265_2.8/source/encoder/search.cpp - /tmp/guix-build-x265-2.8.drv-0/x265_2.8/source/common/arm/asm-primitives.cpp:437:38: error: incompatible types in assignment of ?void(const pixel*, intptr_t, int16_t*, intptr_t) {aka void(const unsigned char*, int, short int*, int)}? to ?void (* [2])(const pixel*, intptr_t, int16_t*, intptr_t) {aka void (* [2])(const unsigned char*, int, short int*, int)}? - p.pu[LUMA_64x48].convert_p2s = PFX(filterPixelToShort_64x48_neon); - ^ - -Downloaded from upstream bug report: -https://bitbucket.org/multicoreware/x265/issues/406 - -Signed-off-by: Bernd Kuhls <bernd.kuhls@t-online.de> - ---- ./source/common/arm/asm-primitives.cpp.orig 2018-05-21 02:33:10.000000000 -0600 -+++ ./source/common/arm/asm-primitives.cpp 2018-05-28 20:38:37.302378303 -0600 -@@ -48,77 +48,77 @@ void setupAssemblyPrimitives(EncoderPrim - p.ssim_4x4x2_core = PFX(ssim_4x4x2_core_neon); - - // addAvg -- p.pu[LUMA_4x4].addAvg = PFX(addAvg_4x4_neon); -- p.pu[LUMA_4x8].addAvg = PFX(addAvg_4x8_neon); -- p.pu[LUMA_4x16].addAvg = PFX(addAvg_4x16_neon); -- p.pu[LUMA_8x4].addAvg = PFX(addAvg_8x4_neon); -- p.pu[LUMA_8x8].addAvg = PFX(addAvg_8x8_neon); -- p.pu[LUMA_8x16].addAvg = PFX(addAvg_8x16_neon); -- p.pu[LUMA_8x32].addAvg = PFX(addAvg_8x32_neon); -- p.pu[LUMA_12x16].addAvg = PFX(addAvg_12x16_neon); -- p.pu[LUMA_16x4].addAvg = PFX(addAvg_16x4_neon); -- p.pu[LUMA_16x8].addAvg = PFX(addAvg_16x8_neon); -- p.pu[LUMA_16x12].addAvg = PFX(addAvg_16x12_neon); -- p.pu[LUMA_16x16].addAvg = PFX(addAvg_16x16_neon); -- p.pu[LUMA_16x32].addAvg = PFX(addAvg_16x32_neon); -- p.pu[LUMA_16x64].addAvg = PFX(addAvg_16x64_neon); -- p.pu[LUMA_24x32].addAvg = PFX(addAvg_24x32_neon); -- p.pu[LUMA_32x8].addAvg = PFX(addAvg_32x8_neon); -- p.pu[LUMA_32x16].addAvg = PFX(addAvg_32x16_neon); -- p.pu[LUMA_32x24].addAvg = PFX(addAvg_32x24_neon); -- p.pu[LUMA_32x32].addAvg = PFX(addAvg_32x32_neon); -- p.pu[LUMA_32x64].addAvg = PFX(addAvg_32x64_neon); -- p.pu[LUMA_48x64].addAvg = PFX(addAvg_48x64_neon); -- p.pu[LUMA_64x16].addAvg = PFX(addAvg_64x16_neon); -- p.pu[LUMA_64x32].addAvg = PFX(addAvg_64x32_neon); -- p.pu[LUMA_64x48].addAvg = PFX(addAvg_64x48_neon); -- p.pu[LUMA_64x64].addAvg = PFX(addAvg_64x64_neon); -+ p.pu[LUMA_4x4].addAvg[ALIGNED] = PFX(addAvg_4x4_neon); -+ p.pu[LUMA_4x8].addAvg[ALIGNED] = PFX(addAvg_4x8_neon); -+ p.pu[LUMA_4x16].addAvg[ALIGNED] = PFX(addAvg_4x16_neon); -+ p.pu[LUMA_8x4].addAvg[ALIGNED] = PFX(addAvg_8x4_neon); -+ p.pu[LUMA_8x8].addAvg[ALIGNED] = PFX(addAvg_8x8_neon); -+ p.pu[LUMA_8x16].addAvg[ALIGNED] = PFX(addAvg_8x16_neon); -+ p.pu[LUMA_8x32].addAvg[ALIGNED] = PFX(addAvg_8x32_neon); -+ p.pu[LUMA_12x16].addAvg[ALIGNED] = PFX(addAvg_12x16_neon); -+ p.pu[LUMA_16x4].addAvg[ALIGNED] = PFX(addAvg_16x4_neon); -+ p.pu[LUMA_16x8].addAvg[ALIGNED] = PFX(addAvg_16x8_neon); -+ p.pu[LUMA_16x12].addAvg[ALIGNED] = PFX(addAvg_16x12_neon); -+ p.pu[LUMA_16x16].addAvg[ALIGNED] = PFX(addAvg_16x16_neon); -+ p.pu[LUMA_16x32].addAvg[ALIGNED] = PFX(addAvg_16x32_neon); -+ p.pu[LUMA_16x64].addAvg[ALIGNED] = PFX(addAvg_16x64_neon); -+ p.pu[LUMA_24x32].addAvg[ALIGNED] = PFX(addAvg_24x32_neon); -+ p.pu[LUMA_32x8].addAvg[ALIGNED] = PFX(addAvg_32x8_neon); -+ p.pu[LUMA_32x16].addAvg[ALIGNED] = PFX(addAvg_32x16_neon); -+ p.pu[LUMA_32x24].addAvg[ALIGNED] = PFX(addAvg_32x24_neon); -+ p.pu[LUMA_32x32].addAvg[ALIGNED] = PFX(addAvg_32x32_neon); -+ p.pu[LUMA_32x64].addAvg[ALIGNED] = PFX(addAvg_32x64_neon); -+ p.pu[LUMA_48x64].addAvg[ALIGNED] = PFX(addAvg_48x64_neon); -+ p.pu[LUMA_64x16].addAvg[ALIGNED] = PFX(addAvg_64x16_neon); -+ p.pu[LUMA_64x32].addAvg[ALIGNED] = PFX(addAvg_64x32_neon); -+ p.pu[LUMA_64x48].addAvg[ALIGNED] = PFX(addAvg_64x48_neon); -+ p.pu[LUMA_64x64].addAvg[ALIGNED] = PFX(addAvg_64x64_neon); - - // chroma addAvg -- p.chroma[X265_CSP_I420].pu[CHROMA_420_4x2].addAvg = PFX(addAvg_4x2_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_4x4].addAvg = PFX(addAvg_4x4_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_4x8].addAvg = PFX(addAvg_4x8_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_4x16].addAvg = PFX(addAvg_4x16_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_6x8].addAvg = PFX(addAvg_6x8_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_8x2].addAvg = PFX(addAvg_8x2_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_8x4].addAvg = PFX(addAvg_8x4_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_8x6].addAvg = PFX(addAvg_8x6_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_8x8].addAvg = PFX(addAvg_8x8_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_8x16].addAvg = PFX(addAvg_8x16_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_8x32].addAvg = PFX(addAvg_8x32_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_12x16].addAvg = PFX(addAvg_12x16_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_16x4].addAvg = PFX(addAvg_16x4_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_16x8].addAvg = PFX(addAvg_16x8_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_16x12].addAvg = PFX(addAvg_16x12_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_16x16].addAvg = PFX(addAvg_16x16_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_16x32].addAvg = PFX(addAvg_16x32_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_24x32].addAvg = PFX(addAvg_24x32_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_32x8].addAvg = PFX(addAvg_32x8_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_32x16].addAvg = PFX(addAvg_32x16_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_32x24].addAvg = PFX(addAvg_32x24_neon); -- p.chroma[X265_CSP_I420].pu[CHROMA_420_32x32].addAvg = PFX(addAvg_32x32_neon); -- -- p.chroma[X265_CSP_I422].pu[CHROMA_422_4x8].addAvg = PFX(addAvg_4x8_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_4x16].addAvg = PFX(addAvg_4x16_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_4x32].addAvg = PFX(addAvg_4x32_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_6x16].addAvg = PFX(addAvg_6x16_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_8x4].addAvg = PFX(addAvg_8x4_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_8x8].addAvg = PFX(addAvg_8x8_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_8x12].addAvg = PFX(addAvg_8x12_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_8x16].addAvg = PFX(addAvg_8x16_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_8x32].addAvg = PFX(addAvg_8x32_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_8x64].addAvg = PFX(addAvg_8x64_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_12x32].addAvg = PFX(addAvg_12x32_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_16x8].addAvg = PFX(addAvg_16x8_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_16x16].addAvg = PFX(addAvg_16x16_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_16x24].addAvg = PFX(addAvg_16x24_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_16x32].addAvg = PFX(addAvg_16x32_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_16x64].addAvg = PFX(addAvg_16x64_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_24x64].addAvg = PFX(addAvg_24x64_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_32x16].addAvg = PFX(addAvg_32x16_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_32x32].addAvg = PFX(addAvg_32x32_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_32x48].addAvg = PFX(addAvg_32x48_neon); -- p.chroma[X265_CSP_I422].pu[CHROMA_422_32x64].addAvg = PFX(addAvg_32x64_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_4x2].addAvg[ALIGNED] = PFX(addAvg_4x2_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_4x4].addAvg[ALIGNED] = PFX(addAvg_4x4_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_4x8].addAvg[ALIGNED] = PFX(addAvg_4x8_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_4x16].addAvg[ALIGNED] = PFX(addAvg_4x16_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_6x8].addAvg[ALIGNED] = PFX(addAvg_6x8_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_8x2].addAvg[ALIGNED] = PFX(addAvg_8x2_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_8x4].addAvg[ALIGNED] = PFX(addAvg_8x4_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_8x6].addAvg[ALIGNED] = PFX(addAvg_8x6_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_8x8].addAvg[ALIGNED] = PFX(addAvg_8x8_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_8x16].addAvg[ALIGNED] = PFX(addAvg_8x16_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_8x32].addAvg[ALIGNED] = PFX(addAvg_8x32_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_12x16].addAvg[ALIGNED] = PFX(addAvg_12x16_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_16x4].addAvg[ALIGNED] = PFX(addAvg_16x4_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_16x8].addAvg[ALIGNED] = PFX(addAvg_16x8_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_16x12].addAvg[ALIGNED] = PFX(addAvg_16x12_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_16x16].addAvg[ALIGNED] = PFX(addAvg_16x16_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_16x32].addAvg[ALIGNED] = PFX(addAvg_16x32_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_24x32].addAvg[ALIGNED] = PFX(addAvg_24x32_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_32x8].addAvg[ALIGNED] = PFX(addAvg_32x8_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_32x16].addAvg[ALIGNED] = PFX(addAvg_32x16_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_32x24].addAvg[ALIGNED] = PFX(addAvg_32x24_neon); -+ p.chroma[X265_CSP_I420].pu[CHROMA_420_32x32].addAvg[ALIGNED] = PFX(addAvg_32x32_neon); -+ -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_4x8].addAvg[ALIGNED] = PFX(addAvg_4x8_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_4x16].addAvg[ALIGNED] = PFX(addAvg_4x16_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_4x32].addAvg[ALIGNED] = PFX(addAvg_4x32_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_6x16].addAvg[ALIGNED] = PFX(addAvg_6x16_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_8x4].addAvg[ALIGNED] = PFX(addAvg_8x4_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_8x8].addAvg[ALIGNED] = PFX(addAvg_8x8_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_8x12].addAvg[ALIGNED] = PFX(addAvg_8x12_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_8x16].addAvg[ALIGNED] = PFX(addAvg_8x16_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_8x32].addAvg[ALIGNED] = PFX(addAvg_8x32_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_8x64].addAvg[ALIGNED] = PFX(addAvg_8x64_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_12x32].addAvg[ALIGNED] = PFX(addAvg_12x32_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_16x8].addAvg[ALIGNED] = PFX(addAvg_16x8_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_16x16].addAvg[ALIGNED] = PFX(addAvg_16x16_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_16x24].addAvg[ALIGNED] = PFX(addAvg_16x24_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_16x32].addAvg[ALIGNED] = PFX(addAvg_16x32_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_16x64].addAvg[ALIGNED] = PFX(addAvg_16x64_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_24x64].addAvg[ALIGNED] = PFX(addAvg_24x64_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_32x16].addAvg[ALIGNED] = PFX(addAvg_32x16_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_32x32].addAvg[ALIGNED] = PFX(addAvg_32x32_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_32x48].addAvg[ALIGNED] = PFX(addAvg_32x48_neon); -+ p.chroma[X265_CSP_I422].pu[CHROMA_422_32x64].addAvg[ALIGNED] = PFX(addAvg_32x64_neon); - - // quant - p.quant = PFX(quant_neon); -@@ -402,7 +402,7 @@ void setupAssemblyPrimitives(EncoderPrim - p.scale2D_64to32 = PFX(scale2D_64to32_neon); - - // scale1D_128to64 -- p.scale1D_128to64 = PFX(scale1D_128to64_neon); -+ p.scale1D_128to64[ALIGNED] = PFX(scale1D_128to64_neon); - - // copy_count - p.cu[BLOCK_4x4].copy_cnt = PFX(copy_cnt_4_neon); -@@ -411,37 +411,37 @@ void setupAssemblyPrimitives(EncoderPrim - p.cu[BLOCK_32x32].copy_cnt = PFX(copy_cnt_32_neon); - - // filterPixelToShort -- p.pu[LUMA_4x4].convert_p2s = PFX(filterPixelToShort_4x4_neon); -- p.pu[LUMA_4x8].convert_p2s = PFX(filterPixelToShort_4x8_neon); -- p.pu[LUMA_4x16].convert_p2s = PFX(filterPixelToShort_4x16_neon); -- p.pu[LUMA_8x4].convert_p2s = PFX(filterPixelToShort_8x4_neon); -- p.pu[LUMA_8x8].convert_p2s = PFX(filterPixelToShort_8x8_neon); -- p.pu[LUMA_8x16].convert_p2s = PFX(filterPixelToShort_8x16_neon); -- p.pu[LUMA_8x32].convert_p2s = PFX(filterPixelToShort_8x32_neon); -- p.pu[LUMA_12x16].convert_p2s = PFX(filterPixelToShort_12x16_neon); -- p.pu[LUMA_16x4].convert_p2s = PFX(filterPixelToShort_16x4_neon); -- p.pu[LUMA_16x8].convert_p2s = PFX(filterPixelToShort_16x8_neon); -- p.pu[LUMA_16x12].convert_p2s = PFX(filterPixelToShort_16x12_neon); -- p.pu[LUMA_16x16].convert_p2s = PFX(filterPixelToShort_16x16_neon); -- p.pu[LUMA_16x32].convert_p2s = PFX(filterPixelToShort_16x32_neon); -- p.pu[LUMA_16x64].convert_p2s = PFX(filterPixelToShort_16x64_neon); -- p.pu[LUMA_24x32].convert_p2s = PFX(filterPixelToShort_24x32_neon); -- p.pu[LUMA_32x8].convert_p2s = PFX(filterPixelToShort_32x8_neon); -- p.pu[LUMA_32x16].convert_p2s = PFX(filterPixelToShort_32x16_neon); -- p.pu[LUMA_32x24].convert_p2s = PFX(filterPixelToShort_32x24_neon); -- p.pu[LUMA_32x32].convert_p2s = PFX(filterPixelToShort_32x32_neon); -- p.pu[LUMA_32x64].convert_p2s = PFX(filterPixelToShort_32x64_neon); -- p.pu[LUMA_48x64].convert_p2s = PFX(filterPixelToShort_48x64_neon); -- p.pu[LUMA_64x16].convert_p2s = PFX(filterPixelToShort_64x16_neon); -- p.pu[LUMA_64x32].convert_p2s = PFX(filterPixelToShort_64x32_neon); -- p.pu[LUMA_64x48].convert_p2s = PFX(filterPixelToShort_64x48_neon); -- p.pu[LUMA_64x64].convert_p2s = PFX(filterPixelToShort_64x64_neon); -+ p.pu[LUMA_4x4].convert_p2s[ALIGNED] = PFX(filterPixelToShort_4x4_neon); -+ p.pu[LUMA_4x8].convert_p2s[ALIGNED] = PFX(filterPixelToShort_4x8_neon); -+ p.pu[LUMA_4x16].convert_p2s[ALIGNED] = PFX(filterPixelToShort_4x16_neon); -+ p.pu[LUMA_8x4].convert_p2s[ALIGNED] = PFX(filterPixelToShort_8x4_neon); -+ p.pu[LUMA_8x8].convert_p2s[ALIGNED] = PFX(filterPixelToShort_8x8_neon); -+ p.pu[LUMA_8x16].convert_p2s[ALIGNED] = PFX(filterPixelToShort_8x16_neon); -+ p.pu[LUMA_8x32].convert_p2s[ALIGNED] = PFX(filterPixelToShort_8x32_neon); -+ p.pu[LUMA_12x16].convert_p2s[ALIGNED] = PFX(filterPixelToShort_12x16_neon); -+ p.pu[LUMA_16x4].convert_p2s[ALIGNED] = PFX(filterPixelToShort_16x4_neon); -+ p.pu[LUMA_16x8].convert_p2s[ALIGNED] = PFX(filterPixelToShort_16x8_neon); -+ p.pu[LUMA_16x12].convert_p2s[ALIGNED] = PFX(filterPixelToShort_16x12_neon); -+ p.pu[LUMA_16x16].convert_p2s[ALIGNED] = PFX(filterPixelToShort_16x16_neon); -+ p.pu[LUMA_16x32].convert_p2s[ALIGNED] = PFX(filterPixelToShort_16x32_neon); -+ p.pu[LUMA_16x64].convert_p2s[ALIGNED] = PFX(filterPixelToShort_16x64_neon); -+ p.pu[LUMA_24x32].convert_p2s[ALIGNED] = PFX(filterPixelToShort_24x32_neon); -+ p.pu[LUMA_32x8].convert_p2s[ALIGNED] = PFX(filterPixelToShort_32x8_neon); -+ p.pu[LUMA_32x16].convert_p2s[ALIGNED] = PFX(filterPixelToShort_32x16_neon); -+ p.pu[LUMA_32x24].convert_p2s[ALIGNED] = PFX(filterPixelToShort_32x24_neon); -+ p.pu[LUMA_32x32].convert_p2s[ALIGNED] = PFX(filterPixelToShort_32x32_neon); -+ p.pu[LUMA_32x64].convert_p2s[ALIGNED] = PFX(filterPixelToShort_32x64_neon); -+ p.pu[LUMA_48x64].convert_p2s[ALIGNED] = PFX(filterPixelToShort_48x64_neon); -+ p.pu[LUMA_64x16].convert_p2s[ALIGNED] = PFX(filterPixelToShort_64x16_neon); -+ p.pu[LUMA_64x32].convert_p2s[ALIGNED] = PFX(filterPixelToShort_64x32_neon); -+ p.pu[LUMA_64x48].convert_p2s[ALIGNED] = PFX(filterPixelToShort_64x48_neon); -+ p.pu[LUMA_64x64].convert_p2s[ALIGNED] = PFX(filterPixelToShort_64x64_neon); - - // Block_fill -- p.cu[BLOCK_4x4].blockfill_s = PFX(blockfill_s_4x4_neon); -- p.cu[BLOCK_8x8].blockfill_s = PFX(blockfill_s_8x8_neon); -- p.cu[BLOCK_16x16].blockfill_s = PFX(blockfill_s_16x16_neon); -- p.cu[BLOCK_32x32].blockfill_s = PFX(blockfill_s_32x32_neon); -+ p.cu[BLOCK_4x4].blockfill_s[ALIGNED] = PFX(blockfill_s_4x4_neon); -+ p.cu[BLOCK_8x8].blockfill_s[ALIGNED] = PFX(blockfill_s_8x8_neon); -+ p.cu[BLOCK_16x16].blockfill_s[ALIGNED] = PFX(blockfill_s_16x16_neon); -+ p.cu[BLOCK_32x32].blockfill_s[ALIGNED] = PFX(blockfill_s_32x32_neon); - - // Blockcopy_ss - p.cu[BLOCK_4x4].copy_ss = PFX(blockcopy_ss_4x4_neon); -@@ -495,21 +495,21 @@ void setupAssemblyPrimitives(EncoderPrim - p.chroma[X265_CSP_I422].cu[BLOCK_422_32x64].copy_sp = PFX(blockcopy_sp_32x64_neon); - - // pixel_add_ps -- p.cu[BLOCK_4x4].add_ps = PFX(pixel_add_ps_4x4_neon); -- p.cu[BLOCK_8x8].add_ps = PFX(pixel_add_ps_8x8_neon); -- p.cu[BLOCK_16x16].add_ps = PFX(pixel_add_ps_16x16_neon); -- p.cu[BLOCK_32x32].add_ps = PFX(pixel_add_ps_32x32_neon); -- p.cu[BLOCK_64x64].add_ps = PFX(pixel_add_ps_64x64_neon); -+ p.cu[BLOCK_4x4].add_ps[ALIGNED] = PFX(pixel_add_ps_4x4_neon); -+ p.cu[BLOCK_8x8].add_ps[ALIGNED] = PFX(pixel_add_ps_8x8_neon); -+ p.cu[BLOCK_16x16].add_ps[ALIGNED] = PFX(pixel_add_ps_16x16_neon); -+ p.cu[BLOCK_32x32].add_ps[ALIGNED] = PFX(pixel_add_ps_32x32_neon); -+ p.cu[BLOCK_64x64].add_ps[ALIGNED] = PFX(pixel_add_ps_64x64_neon); - - // chroma add_ps -- p.chroma[X265_CSP_I420].cu[BLOCK_420_4x4].add_ps = PFX(pixel_add_ps_4x4_neon); -- p.chroma[X265_CSP_I420].cu[BLOCK_420_8x8].add_ps = PFX(pixel_add_ps_8x8_neon); -- p.chroma[X265_CSP_I420].cu[BLOCK_420_16x16].add_ps = PFX(pixel_add_ps_16x16_neon); -- p.chroma[X265_CSP_I420].cu[BLOCK_420_32x32].add_ps = PFX(pixel_add_ps_32x32_neon); -- p.chroma[X265_CSP_I422].cu[BLOCK_422_4x8].add_ps = PFX(pixel_add_ps_4x8_neon); -- p.chroma[X265_CSP_I422].cu[BLOCK_422_8x16].add_ps = PFX(pixel_add_ps_8x16_neon); -- p.chroma[X265_CSP_I422].cu[BLOCK_422_16x32].add_ps = PFX(pixel_add_ps_16x32_neon); -- p.chroma[X265_CSP_I422].cu[BLOCK_422_32x64].add_ps = PFX(pixel_add_ps_32x64_neon); -+ p.chroma[X265_CSP_I420].cu[BLOCK_420_4x4].add_ps[ALIGNED] = PFX(pixel_add_ps_4x4_neon); -+ p.chroma[X265_CSP_I420].cu[BLOCK_420_8x8].add_ps[ALIGNED] = PFX(pixel_add_ps_8x8_neon); -+ p.chroma[X265_CSP_I420].cu[BLOCK_420_16x16].add_ps[ALIGNED] = PFX(pixel_add_ps_16x16_neon); -+ p.chroma[X265_CSP_I420].cu[BLOCK_420_32x32].add_ps[ALIGNED] = PFX(pixel_add_ps_32x32_neon); -+ p.chroma[X265_CSP_I422].cu[BLOCK_422_4x8].add_ps[ALIGNED] = PFX(pixel_add_ps_4x8_neon); -+ p.chroma[X265_CSP_I422].cu[BLOCK_422_8x16].add_ps[ALIGNED] = PFX(pixel_add_ps_8x16_neon); -+ p.chroma[X265_CSP_I422].cu[BLOCK_422_16x32].add_ps[ALIGNED] = PFX(pixel_add_ps_16x32_neon); -+ p.chroma[X265_CSP_I422].cu[BLOCK_422_32x64].add_ps[ALIGNED] = PFX(pixel_add_ps_32x64_neon); - - // cpy2Dto1D_shr - p.cu[BLOCK_4x4].cpy2Dto1D_shr = PFX(cpy2Dto1D_shr_4x4_neon); -@@ -518,10 +518,10 @@ void setupAssemblyPrimitives(EncoderPrim - p.cu[BLOCK_32x32].cpy2Dto1D_shr = PFX(cpy2Dto1D_shr_32x32_neon); - - // ssd_s -- p.cu[BLOCK_4x4].ssd_s = PFX(pixel_ssd_s_4x4_neon); -- p.cu[BLOCK_8x8].ssd_s = PFX(pixel_ssd_s_8x8_neon); -- p.cu[BLOCK_16x16].ssd_s = PFX(pixel_ssd_s_16x16_neon); -- p.cu[BLOCK_32x32].ssd_s = PFX(pixel_ssd_s_32x32_neon); -+ p.cu[BLOCK_4x4].ssd_s[ALIGNED] = PFX(pixel_ssd_s_4x4_neon); -+ p.cu[BLOCK_8x8].ssd_s[ALIGNED] = PFX(pixel_ssd_s_8x8_neon); -+ p.cu[BLOCK_16x16].ssd_s[ALIGNED] = PFX(pixel_ssd_s_16x16_neon); -+ p.cu[BLOCK_32x32].ssd_s[ALIGNED] = PFX(pixel_ssd_s_32x32_neon); - - // sse_ss - p.cu[BLOCK_4x4].sse_ss = PFX(pixel_sse_ss_4x4_neon); -@@ -548,10 +548,10 @@ void setupAssemblyPrimitives(EncoderPrim - p.chroma[X265_CSP_I422].cu[BLOCK_422_32x64].sub_ps = PFX(pixel_sub_ps_32x64_neon); - - // calc_Residual -- p.cu[BLOCK_4x4].calcresidual = PFX(getResidual4_neon); -- p.cu[BLOCK_8x8].calcresidual = PFX(getResidual8_neon); -- p.cu[BLOCK_16x16].calcresidual = PFX(getResidual16_neon); -- p.cu[BLOCK_32x32].calcresidual = PFX(getResidual32_neon); -+ p.cu[BLOCK_4x4].calcresidual[ALIGNED] = PFX(getResidual4_neon); -+ p.cu[BLOCK_8x8].calcresidual[ALIGNED] = PFX(getResidual8_neon); -+ p.cu[BLOCK_16x16].calcresidual[ALIGNED] = PFX(getResidual16_neon); -+ p.cu[BLOCK_32x32].calcresidual[ALIGNED] = PFX(getResidual32_neon); - - // sse_pp - p.cu[BLOCK_4x4].sse_pp = PFX(pixel_sse_pp_4x4_neon); -@@ -722,31 +722,31 @@ void setupAssemblyPrimitives(EncoderPrim - p.pu[LUMA_64x64].sad_x4 = PFX(sad_x4_64x64_neon); - - // pixel_avg_pp -- p.pu[LUMA_4x4].pixelavg_pp = PFX(pixel_avg_pp_4x4_neon); -- p.pu[LUMA_4x8].pixelavg_pp = PFX(pixel_avg_pp_4x8_neon); -- p.pu[LUMA_4x16].pixelavg_pp = PFX(pixel_avg_pp_4x16_neon); -- p.pu[LUMA_8x4].pixelavg_pp = PFX(pixel_avg_pp_8x4_neon); -- p.pu[LUMA_8x8].pixelavg_pp = PFX(pixel_avg_pp_8x8_neon); -- p.pu[LUMA_8x16].pixelavg_pp = PFX(pixel_avg_pp_8x16_neon); -- p.pu[LUMA_8x32].pixelavg_pp = PFX(pixel_avg_pp_8x32_neon); -- p.pu[LUMA_12x16].pixelavg_pp = PFX(pixel_avg_pp_12x16_neon); -- p.pu[LUMA_16x4].pixelavg_pp = PFX(pixel_avg_pp_16x4_neon); -- p.pu[LUMA_16x8].pixelavg_pp = PFX(pixel_avg_pp_16x8_neon); -- p.pu[LUMA_16x12].pixelavg_pp = PFX(pixel_avg_pp_16x12_neon); -- p.pu[LUMA_16x16].pixelavg_pp = PFX(pixel_avg_pp_16x16_neon); -- p.pu[LUMA_16x32].pixelavg_pp = PFX(pixel_avg_pp_16x32_neon); -- p.pu[LUMA_16x64].pixelavg_pp = PFX(pixel_avg_pp_16x64_neon); -- p.pu[LUMA_24x32].pixelavg_pp = PFX(pixel_avg_pp_24x32_neon); -- p.pu[LUMA_32x8].pixelavg_pp = PFX(pixel_avg_pp_32x8_neon); -- p.pu[LUMA_32x16].pixelavg_pp = PFX(pixel_avg_pp_32x16_neon); -- p.pu[LUMA_32x24].pixelavg_pp = PFX(pixel_avg_pp_32x24_neon); -- p.pu[LUMA_32x32].pixelavg_pp = PFX(pixel_avg_pp_32x32_neon); -- p.pu[LUMA_32x64].pixelavg_pp = PFX(pixel_avg_pp_32x64_neon); -- p.pu[LUMA_48x64].pixelavg_pp = PFX(pixel_avg_pp_48x64_neon); -- p.pu[LUMA_64x16].pixelavg_pp = PFX(pixel_avg_pp_64x16_neon); -- p.pu[LUMA_64x32].pixelavg_pp = PFX(pixel_avg_pp_64x32_neon); -- p.pu[LUMA_64x48].pixelavg_pp = PFX(pixel_avg_pp_64x48_neon); -- p.pu[LUMA_64x64].pixelavg_pp = PFX(pixel_avg_pp_64x64_neon); -+ p.pu[LUMA_4x4].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_4x4_neon); -+ p.pu[LUMA_4x8].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_4x8_neon); -+ p.pu[LUMA_4x16].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_4x16_neon); -+ p.pu[LUMA_8x4].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_8x4_neon); -+ p.pu[LUMA_8x8].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_8x8_neon); -+ p.pu[LUMA_8x16].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_8x16_neon); -+ p.pu[LUMA_8x32].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_8x32_neon); -+ p.pu[LUMA_12x16].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_12x16_neon); -+ p.pu[LUMA_16x4].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_16x4_neon); -+ p.pu[LUMA_16x8].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_16x8_neon); -+ p.pu[LUMA_16x12].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_16x12_neon); -+ p.pu[LUMA_16x16].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_16x16_neon); -+ p.pu[LUMA_16x32].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_16x32_neon); -+ p.pu[LUMA_16x64].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_16x64_neon); -+ p.pu[LUMA_24x32].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_24x32_neon); -+ p.pu[LUMA_32x8].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_32x8_neon); -+ p.pu[LUMA_32x16].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_32x16_neon); -+ p.pu[LUMA_32x24].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_32x24_neon); -+ p.pu[LUMA_32x32].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_32x32_neon); -+ p.pu[LUMA_32x64].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_32x64_neon); -+ p.pu[LUMA_48x64].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_48x64_neon); -+ p.pu[LUMA_64x16].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_64x16_neon); -+ p.pu[LUMA_64x32].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_64x32_neon); -+ p.pu[LUMA_64x48].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_64x48_neon); -+ p.pu[LUMA_64x64].pixelavg_pp[ALIGNED] = PFX(pixel_avg_pp_64x64_neon); - - // planecopy - p.planecopy_cp = PFX(pixel_planecopy_cp_neon); diff --git a/gnu/packages/patches/x265-detect512-all-arches.patch b/gnu/packages/patches/x265-detect512-all-arches.patch new file mode 100644 index 0000000000..4d39d868fd --- /dev/null +++ b/gnu/packages/patches/x265-detect512-all-arches.patch @@ -0,0 +1,37 @@ +https://sources.debian.org/data/main/x/x265/2.9-3/debian/patches/0003-detect512-is-needed-on-all-architectures.patch + +From: Adam Sampson <unknown@bitbucket> +Date: Sun, 14 Oct 2018 14:04:18 +0200 +Subject: detect512 is needed on all architectures + +--- + source/common/cpu.cpp | 9 +++++---- + 1 file changed, 5 insertions(+), 4 deletions(-) + +diff --git a/source/common/cpu.cpp b/source/common/cpu.cpp +index 0681ff5..fa687da 100644 +--- a/source/common/cpu.cpp ++++ b/source/common/cpu.cpp +@@ -110,6 +110,11 @@ const cpu_name_t cpu_names[] = + { "", 0 }, + }; + ++bool detect512() ++{ ++ return(enable512); ++} ++ + #if X265_ARCH_X86 + + extern "C" { +@@ -123,10 +128,6 @@ uint64_t PFX(cpu_xgetbv)(int xcr); + #pragma warning(disable: 4309) // truncation of constant value + #endif + +-bool detect512() +-{ +- return(enable512); +-} + uint32_t cpu_detect(bool benableavx512 ) + { + diff --git a/gnu/packages/patches/x265-fix-ppc64le-build.patch b/gnu/packages/patches/x265-fix-ppc64le-build.patch deleted file mode 100644 index f71d2436ab..0000000000 --- a/gnu/packages/patches/x265-fix-ppc64le-build.patch +++ /dev/null @@ -1,25 +0,0 @@ -https://sources.debian.org/data/main/x/x265/2.8-3/debian/patches/0003-Fix-build-error-on-on-ppc64le.patch - -This patch also fixes building on armhf-linux and aarch64-linux - -From: Jayashree <jayashree.c@multicorewareinc.com> -Date: Fri, 25 May 2018 10:26:05 +0530 -Subject: Fix build error on on ppc64le - ---- - source/common/param.cpp | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/source/common/param.cpp b/source/common/param.cpp -index 31bcbc7..4a6d0c8 100644 ---- a/source/common/param.cpp -+++ b/source/common/param.cpp -@@ -633,7 +633,7 @@ int x265_param_parse(x265_param* p, const char* name, const char* value) - if (bValueWasNull) - p->cpuid = atobool(value); - else -- p->cpuid = parseCpuName(value, bError); -+ p->cpuid = parseCpuName(value, bError, false); - #endif - } - OPT("fps") diff --git a/gnu/packages/patches/zstd-fix-stdin-list-test.patch b/gnu/packages/patches/zstd-fix-stdin-list-test.patch deleted file mode 100644 index a10355448c..0000000000 --- a/gnu/packages/patches/zstd-fix-stdin-list-test.patch +++ /dev/null @@ -1,30 +0,0 @@ -From 8e7bdc18d62632adcee029b2f8f5013d11549dd7 Mon Sep 17 00:00:00 2001 -From: "W. Felix Handte" <w@felixhandte.com> -Date: Fri, 29 Jun 2018 16:31:22 -0400 -Subject: [PATCH] Fix Tests of `--list` Behavior with `stdin` - ---- - tests/playTests.sh | 10 ++++++++-- - 1 file changed, 8 insertions(+), 2 deletions(-) - -diff --git a/tests/playTests.sh b/tests/playTests.sh -index 09a7377f2..aa5535d59 100755 ---- a/tests/playTests.sh -+++ b/tests/playTests.sh -@@ -731,8 +731,14 @@ $ECHO "\n===> zstd --list/-l error detection tests " - ! $ZSTD -lv tmp1* - ! $ZSTD --list -v tmp2 tmp12.zst - --$ECHO "\n===> zstd --list/-l exits 1 when stdin is piped in" --! echo "piped STDIN" | $ZSTD --list -+$ECHO "\n===> zstd --list/-l errors when presented with stdin / no files" -+! $ZSTD -l -+! $ZSTD -l - -+! $ZSTD -l < tmp1.zst -+! $ZSTD -l - < tmp1.zst -+! $ZSTD -l - tmp1.zst -+! $ZSTD -l - tmp1.zst < tmp1.zst -+$ZSTD -l tmp1.zst < tmp1.zst # but doesn't error just because stdin is not a tty - - $ECHO "\n===> zstd --list/-l test with null files " - ./datagen -g0 > tmp5 diff --git a/gnu/packages/patches/zstd-fix-stdin-list-without-tty.patch b/gnu/packages/patches/zstd-fix-stdin-list-without-tty.patch deleted file mode 100644 index 47fa3e59a7..0000000000 --- a/gnu/packages/patches/zstd-fix-stdin-list-without-tty.patch +++ /dev/null @@ -1,67 +0,0 @@ -From 712a9fd9721c314f4b0238577d803b012845f6d2 Mon Sep 17 00:00:00 2001 -From: "W. Felix Handte" <w@felixhandte.com> -Date: Fri, 29 Jun 2018 15:33:44 -0400 -Subject: [PATCH] Allow Invoking `zstd --list` When `stdin` is not a `tty` - -Also now returns an error when no inputs are given. - -New proposed behavior: - -``` -felix@odin:~/prog/zstd (list-stdin-check)$ ./zstd -l; echo $? -No files given -1 -felix@odin:~/prog/zstd (list-stdin-check)$ ./zstd -l Makefile.zst; echo $? -Frames Skips Compressed Uncompressed Ratio Check Filename - 1 0 3.08 KB 10.92 KB 3.544 XXH64 Makefile.zst -0 -felix@odin:~/prog/zstd (list-stdin-check)$ ./zstd -l <Makefile.zst; echo $? -zstd: --list does not support reading from standard input -No files given -1 -felix@odin:~/prog/zstd (list-stdin-check)$ ./zstd -l Makefile.zst <Makefile.zst; echo $? -Frames Skips Compressed Uncompressed Ratio Check Filename - 1 0 3.08 KB 10.92 KB 3.544 XXH64 Makefile.zst -0 -felix@odin:~/prog/zstd (list-stdin-check)$ -``` ---- - programs/fileio.c | 16 ++++++++++------ - 1 file changed, 10 insertions(+), 6 deletions(-) - -diff --git a/programs/fileio.c b/programs/fileio.c -index 0175b3163..b4eed28d1 100644 ---- a/programs/fileio.c -+++ b/programs/fileio.c -@@ -2017,21 +2017,25 @@ static int FIO_listFile(fileInfo_t* total, const char* inFileName, int displayLe - } - - int FIO_listMultipleFiles(unsigned numFiles, const char** filenameTable, int displayLevel){ -- -- if (!IS_CONSOLE(stdin)) { -- DISPLAYOUT("zstd: --list does not support reading from standard input\n"); -- return 1; -+ unsigned u; -+ for (u=0; u<numFiles;u++) { -+ if (!strcmp (filenameTable[u], stdinmark)) { -+ DISPLAYOUT("zstd: --list does not support reading from standard input\n"); -+ return 1; -+ } - } - - if (numFiles == 0) { -+ if (!IS_CONSOLE(stdin)) { -+ DISPLAYOUT("zstd: --list does not support reading from standard input\n"); -+ } - DISPLAYOUT("No files given\n"); -- return 0; -+ return 1; - } - if (displayLevel <= 2) { - DISPLAYOUT("Frames Skips Compressed Uncompressed Ratio Check Filename\n"); - } - { int error = 0; -- unsigned u; - fileInfo_t total; - memset(&total, 0, sizeof(total)); - total.usesCheck = 1; |