diff options
Diffstat (limited to 'gnu/packages/python-xyz.scm')
| -rw-r--r-- | gnu/packages/python-xyz.scm | 208 |
1 files changed, 179 insertions, 29 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index a995618305..db31794225 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -23,7 +23,7 @@ ;;; Copyright © 2016 Daniel Pimentel <d4n1@d4n1.org> ;;; Copyright © 2016 Sou Bunnbu <iyzsong@gmail.com> ;;; Copyright © 2016, 2017 Troy Sankey <sankeytms@gmail.com> -;;; Copyright © 2016, 2017 Nils Gillmann <ng0@n0.is> +;;; Copyright © 2016, 2017 ng0 <ng0@n0.is> ;;; Copyright © 2016 Dylan Jeffers <sapientech@sapientech@openmailbox.org> ;;; Copyright © 2016 David Craven <david@craven.ch> ;;; Copyright © 2016, 2017, 2018, 2019 Marius Bakke <mbakke@fastmail.com> @@ -54,10 +54,11 @@ ;;; Copyright © 2018 Nicolas Goaziou <mail@nicolasgoaziou.fr> ;;; Copyright © 2018 Oleg Pykhalov <go.wigust@gmail.com> ;;; Copyright © 2018 Clément Lassieur <clement@lassieur.org> -;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com> +;;; Copyright © 2018, 2019 Maxim Cournoyer <maxim.cournoyer@gmail.com> ;;; Copyright © 2018 Luther Thompson <lutheroto@gmail.com> ;;; Copyright © 2018 Vagrant Cascadian <vagrant@debian.org> ;;; Copyright © 2019 Brett Gilio <brettg@posteo.net> +;;; Copyright © 2019 Sam <smbaines8@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -142,6 +143,7 @@ #:use-module (guix packages) #:use-module (guix download) #:use-module (guix git-download) + #:use-module (guix hg-download) #:use-module (guix utils) #:use-module (guix build-system gnu) #:use-module (guix build-system cmake) @@ -229,6 +231,28 @@ pidof, tty, taskset, pmap.") planar geometric objects. It is based on the @code{GEOS} library.") (license license:bsd-3))) +(define-public python-shortuuid + (package + (name "python-shortuuid") + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "shortuuid" version)) + (sha256 + (base32 + "1f8i4zwj5vmpzbz6b17bljy4399gx5aq7vsyw63sz2qgyjcd73yh")))) + (build-system python-build-system) + (native-inputs + `(("python-pep8" ,python-pep8))) + (home-page "https://github.com/skorokithakis/shortuuid") + (synopsis "Generator library for concise, unambiguous and URL-safe UUIDs") + (description + "@code{shortuuid} is a Python library for generating concise, unambiguous +and URL-safe UUIDs. UUIDs are generated using the built-in Python @code{uuid} +module and then similar looking characters are removed.") + (license license:bsd-3))) + (define-public python-logwrap (package (name "python-logwrap") @@ -839,6 +863,73 @@ messages in color.") (define-public python2-coloredlogs (package-with-python2 python-coloredlogs)) +(define-public python-et-xmlfile + (package + (name "python-et-xmlfile") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "et_xmlfile" version)) + (sha256 + (base32 + "0nrkhcb6jdrlb6pwkvd4rycw34y3s931hjf409ij9xkjsli9fkb1")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest")))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-lxml" ,python-lxml))) ;used for the tests + (home-page "https://bitbucket.org/openpyxl/et_xmlfile") + (synopsis "Low memory implementation of @code{lxml.xmlfile}") + (description "This Python library is based upon the @code{xmlfile} module +from @code{lxml}. It aims to provide a low memory, compatible implementation +of @code{xmlfile}.") + (license license:expat))) + +(define-public python2-et-xmlfile + (package-with-python2 python-et-xmlfile)) + +(define-public python-openpyxl + (package + (name "python-openpyxl") + (version "2.6.0") + (source + (origin + ;; We use the upstream repository, as the tests are not included in the + ;; PyPI releases. + (method hg-fetch) + (uri (hg-reference + (url "https://bitbucket.org/openpyxl/openpyxl") + (changeset version))) + (file-name (string-append name "-" version "-checkout")) + (sha256 + (base32 + "1x47ngn7ybaqdbvg90c8h2x0j6yfdfj25gjfinp2w5rf62gsany7")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest")))))) + (native-inputs + ;; For the test suite. + `(("python-lxml" ,python-lxml) + ("python-pillow" ,python-pillow) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-et-xmlfile" ,python-et-xmlfile) + ("python-jdcal" ,python-jdcal))) + (home-page "https://openpyxl.readthedocs.io") + (synopsis "Python library to read/write Excel 2010 XLSX/XLSM files") + (description "This Python library allows reading and writing to the Excel XLSX, XLSM, +XLTX and XLTM file formats that are defined by the Office Open XML (OOXML) +standard.") + (license license:expat))) + (define-public python-eventlet (package (name "python-eventlet") @@ -950,13 +1041,13 @@ human-friendly syntax.") (define-public python-pandas (package (name "python-pandas") - (version "0.23.4") + (version "0.24.2") (source (origin (method url-fetch) (uri (pypi-uri "pandas" version)) (sha256 - (base32 "1x54pd7hr3y7qahx6b5bf2wzj54xvl8r3s1h4pl254pnmi3wl92v")))) + (base32 "18imlm8xbhcbwy4wa957a1fkamrcb0z988z006jpfda3ki09z4ag")))) (build-system python-build-system) (arguments `(#:modules ((guix build utils) @@ -964,6 +1055,13 @@ human-friendly syntax.") (ice-9 ftw) (srfi srfi-26)) #:phases (modify-phases %standard-phases + (add-after 'unpack 'patch-which + (lambda* (#:key inputs #:allow-other-keys) + (let ((which (assoc-ref inputs "which"))) + (substitute* "pandas/io/clipboard/__init__.py" + (("^CHECK_CMD = .*") + (string-append "CHECK_CMD = \"" which "\"\n")))) + #t)) (replace 'check (lambda _ (let ((build-directory @@ -972,17 +1070,17 @@ human-friendly syntax.") (car (scandir "build" (cut string-prefix? "lib." <>)))))) ;; Disable the "strict data files" option which causes - ;; the build to error out if required data files are not - ;; available (as is the case with PyPI archives). + ;; the build to error out if required data files are + ;; not available (as is the case with PyPI archives). (substitute* "setup.cfg" (("addopts = --strict-data-files") "addopts = ")) (with-directory-excursion build-directory - ;; Delete tests that require "moto" which is not yet in Guix. + ;; Delete tests that require "moto" which is not yet + ;; in Guix. (for-each delete-file '("pandas/tests/io/conftest.py" "pandas/tests/io/json/test_compression.py" "pandas/tests/io/parser/test_network.py" - "pandas/tests/io/test_excel.py" "pandas/tests/io/test_parquet.py")) (invoke "pytest" "-vv" "pandas" "--skip-slow" "--skip-network" "-k" @@ -990,15 +1088,20 @@ human-friendly syntax.") "not test_read_s3_jsonl")))))))) (propagated-inputs `(("python-numpy" ,python-numpy) + ("python-openpyxl" ,python-openpyxl) ("python-pytz" ,python-pytz) - ("python-dateutil" ,python-dateutil))) + ("python-dateutil" ,python-dateutil) + ("python-xlrd" ,python-xlrd))) + (inputs + `(("which" ,which))) (native-inputs `(("python-cython" ,python-cython) ("python-beautifulsoup4" ,python-beautifulsoup4) ("python-lxml" ,python-lxml) ("python-html5lib" ,python-html5lib) ("python-nose" ,python-nose) - ("python-pytest" ,python-pytest))) + ("python-pytest" ,python-pytest) + ("python-pytest-mock" ,python-pytest-mock))) (home-page "https://pandas.pydata.org") (synopsis "Data structures for data analysis, time series, and statistics") (description @@ -1765,6 +1868,34 @@ version numbers.") (define-public python2-vcversioner (package-with-python2 python-vcversioner)) +(define-public python-jdcal + (package + (name "python-jdcal") + (version "1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jdcal" version)) + (sha256 + (base32 + "1ja6j2xq97bsl6rv09mhdx7n0xnrsfx0mj5xqza0mxghqmkm02pa")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/phn/jdcal") + (synopsis "Functions to convert between Julian dates Gregorian dates") + (description "This Python library provides functions for converting +between Julian dates and Gregorian dates.") + (license license:bsd-2))) + +(define-public python2-jdcal + (package-with-python2 python-jdcal)) + (define-public python-jsonschema (package (name "python-jsonschema") @@ -2641,14 +2772,14 @@ Server (PLS).") (define-public python-language-server (package (name "python-language-server") - (version "0.24.0") + (version "0.25.0") (source (origin (method url-fetch) (uri (pypi-uri "python-language-server" version)) (sha256 (base32 - "05zmv6jr7qbgnkz0lqh5pr7kr4lm12i8ljm2k5h5kz3q9m8d4mm0")))) + "1xabnaqd4n72myrc3mxl2y33vr2p7c9c5a87n77p9k327ckvdx01")))) (build-system python-build-system) (propagated-inputs `(("python-pluggy" ,python-pluggy) @@ -2660,7 +2791,8 @@ Server (PLS).") ("python-pycodestyle" ,python-pycodestyle) ("python-mccabe" ,python-mccabe) ("python-rope" ,python-rope) - ("python-autopep8" ,python-autopep8))) + ("python-autopep8" ,python-autopep8) + ("python-pylint" ,python-pylint))) (home-page "https://github.com/palantir/python-language-server") (synopsis "Python implementation of the Language Server Protocol") (description @@ -3393,13 +3525,14 @@ To address this and enable easy cycling over arbitrary @code{kwargs}, the (name "python-colorspacious") (version "1.1.0") (source - (origin - (method url-fetch) - (uri (string-append "https://github.com/njsmith/colorspacious/archive/v" - version ".tar.gz")) - (file-name (string-append name "-" version)) - (sha256 - (base32 "1vflh5jm32qb0skza2i8pjacv09w6gq84fqpp2nj77s0rbmzgr4k")))) + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/njsmith/colorspacious.git") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0g0lxqiscy5g5rq9421vv7abg0c90jzy0zmas2z3hya6k2dr5aid")))) (build-system python-build-system) (propagated-inputs `(("python-numpy" ,python-numpy))) @@ -13205,14 +13338,13 @@ such as figshare or Zenodo.") (define-public python-pyro4 (package (name "python-pyro4") - (version "4.74") + (version "4.75") (source (origin (method url-fetch) (uri (pypi-uri "Pyro4" version)) (sha256 - (base32 - "0pzp7c6q3vvkxq0wy9lr6wd5wky40sajz69g697i5rb2q497pvc9")))) + (base32 "1dfpp36imddx19yv0kd28gk1l71ckhpqy6jd590wpm2680jw15rq")))) (build-system python-build-system) (propagated-inputs `(("python-serpent" ,python-serpent))) @@ -13875,14 +14007,13 @@ working with iterables.") (define-public python-latexcodec (package (name "python-latexcodec") - (version "1.0.5") + (version "1.0.6") (source (origin (method url-fetch) (uri (pypi-uri "latexcodec" version)) (sha256 - (base32 - "0zdd1gf24i83ykadx0y30n3001j43scqr2saql3vckk5c39dj1wn")))) + (base32 "0s4wdbg0w2l8pj3i0y4510i0s04p8nhxcsa2z41bjsv0k66npb81")))) (build-system python-build-system) (inputs `(("python-six" ,python-six))) @@ -14936,14 +15067,13 @@ distribution.") (define-public python-gast (package (name "python-gast") - (version "0.2.0") + (version "0.2.2") (source (origin (method url-fetch) (uri (pypi-uri "gast" version)) (sha256 - (base32 - "0c296xm1vz9x4w4inmdl0k8mnc0i9arw94si2i7pglpc461r0s3h")))) + (base32 "1w5dzdb3gpcfmd2s0b93d8gff40a1s41rv31458z14inb3s9v4zy")))) (build-system python-build-system) (propagated-inputs `(("python-astunparse" ,python-astunparse))) @@ -15087,3 +15217,23 @@ and dates in \"human readable\" forms. For example, it would display (description "Txaio provides a compatibility layer between the Python @code{asyncio} module and @code{Twisted}.") (license license:expat))) + +(define-public python-toolshed + (package + (name "python-toolshed") + (version "0.4.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "toolshed" version)) + (sha256 + (base32 + "14zvz51gzf9i1i3d1sj363ba4rksl6lcf4lz1arl8hpqgcbir8r3")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/brentp/toolshed/") + (synopsis "Collection of modules and functions for working with data") + (description "This is a collection of well-tested, simple modules and +functions that aim to reduce boilerplate when working with data.") + (license license:bsd-2))) |