diff options
Diffstat (limited to 'gnu/packages/python-xyz.scm')
| -rw-r--r-- | gnu/packages/python-xyz.scm | 218 |
1 files changed, 186 insertions, 32 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 60a0ea5f5d..7f8764b672 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -66,7 +66,7 @@ ;;; Copyright © 2019 Jacob MacDonald <jaccarmac@gmail.com> ;;; Copyright © 2019, 2020 Giacomo Leidi <goodoldpaul@autistici.org> ;;; Copyright © 2019 Wiktor Żelazny <wzelazny@vurv.cz> -;;; Copyright © 2019, 2020 Tanguy Le Carrour <tanguy@bioneland.org> +;;; Copyright © 2019, 2020, 2021 Tanguy Le Carrour <tanguy@bioneland.org> ;;; Copyright © 2019, 2021 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> ;;; Copyright © 2020 Riku Viitanen <riku.viitanen@protonmail.com> ;;; Copyright © 2020 Jakub Kądziołka <kuba@kadziolka.net> @@ -105,6 +105,7 @@ ;;; Copyright © 2021 Danial Behzadi <dani.behzi@ubuntu.com> ;;; Copyright © 2021 Maxime Devos <maximedevos@telenet.be> ;;; Copyright © 2021 Hugo Lecomte <hugo.lecomte@inria.fr> +;;; Copyright © 2021 Franck Pérignon <franck.perignon@univ-grenoble-alpes.fr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -5534,14 +5535,14 @@ that client code uses to construct the grammar directly in Python code.") (define-public python-numexpr (package (name "python-numexpr") - (version "2.6.5") + (version "2.7.3") (source (origin (method url-fetch) (uri (pypi-uri "numexpr" version)) (sha256 (base32 - "1frnbcwmsi312154x274xl28xazr1k8vjby83fwyla2n10a81bgq")))) + "09d8yfsx33ddwfkpn8805w2mxnn4cvf47yc66g4azldpz4lnaqa3")))) (build-system python-build-system) (arguments `(#:tests? #f)) ; no tests included (propagated-inputs @@ -6321,13 +6322,13 @@ the OleFileIO module from PIL, the Python Image Library.") (define-public python-pikepdf (package (name "python-pikepdf") - (version "2.14.2") + (version "2.16.1") (source (origin (method url-fetch) (uri (pypi-uri "pikepdf" version)) (sha256 - (base32 "01f173af5j0fmrzg6czfr92d331bqdbs3dkch7p41ykyv4fsv6kn")))) + (base32 "1phdpi9cm2pbvgcxqvwr8ck327sxhdw4dnxmzhrbf7hzydmgykg2")))) (build-system python-build-system) (arguments `(#:tests? #false)) ;require python-xmp-toolkit @@ -10350,6 +10351,26 @@ your package is installed, via @code{pkg_resources} (part of primary use case is APIs defined before keyword-only parameters existed.") (license license:gpl3+))) +(define-public python-langdetect + (package + (name "python-langdetect") + (version "1.0.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "langdetect" version)) + (sha256 + (base32 "1805svvb7xjm4sf1j7b6nc3409x37pd1xmabfwwjf1ldkzwgxhfb")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six))) + (home-page "https://github.com/Mimino666/langdetect") + (synopsis "Language detection library") + (description + "This library is a port of Nakatani Shuyo's language-detection library +(version from 03/03/2014) to Python.") + (license license:expat))) + (define-public python-pyasn1 (package (name "python-pyasn1") @@ -19391,6 +19412,50 @@ and works only with Python 2 and NumPy < 1.9.") (define-public python2-phonenumbers (package-with-python2 python-phonenumbers)) +(define-public python-heapdict + (package + (name "python-heapdict") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "HeapDict" version)) + (sha256 + (base32 + "1dnd7v9adqd21bf4ih2wzn9a7b41m0nccb0vbxny9n037rxzb5c4")))) + (build-system python-build-system) + (home-page "http://stutzbachenterprises.com/") + (synopsis "Heap with decrease-key and increase-key operations") + (description + "heapdict implements the MutableMapping ABC, meaning it works pretty much +like a regular Python @code{dict}. It’s designed to be used as a priority +queue.") + (license license:bsd-3))) + +(define-public python-zict + (package + (name "python-zict") + (version "2.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "zict" version)) + (sha256 + (base32 + "05pd1hyhqvpw87rnbvl3vdyf619snpyccbswaxisdj17frwnjacf")))) + (build-system python-build-system) + (propagated-inputs + `(("python-heapdict" ,python-heapdict))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://zict.readthedocs.io/en/latest/") + (synopsis "Composable mutable mapping tools") + (description "This package provides abstract @code{MutableMapping} classes +that consume and build on other @code{MutableMappings}. Several of these can +be composed with one another to form intuitive interfaces over complex storage +systems policies.") + (license license:bsd-3))) + (define-public python-send2trash (package (name "python-send2trash") @@ -20726,6 +20791,43 @@ Public Suffix List's private domains as well.") (define-public python2-tldextract (package-with-python2 python-tldextract)) +(define-public python-tldr + (package + (name "python-tldr") + (version "1.2.1") + (source + (origin + ;; There's no test in PyPI. + (method git-fetch) + (uri (git-reference + (url "https://github.com/tldr-pages/tldr-python-client") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0n9wqvjxspm18vlxf9j9slrcydshk4rkv5nwkrqhfq606n6zvks4")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + ;; This test fails. It tries to open a network socket. + (invoke "pytest" "-vv" "-k" "not test_error_message"))))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (inputs + `(("python-argcomplete" ,python-argcomplete) + ("python-colorama" ,python-colorama) + ("python-termcolor" ,python-termcolor))) + (home-page "https://github.com/tldr-pages/tldr-python-client") + (synopsis "Python command-line client for tldr pages") + (description "This package provides the @code{tldr} command allowing users +to view @code{tldr} pages from a shell. The @code{tldr} pages are a community +effort to simplify the man pages with practical examples.") + (license license:expat))) ; MIT license + (define-public python-nodeenv (package (name "python-nodeenv") @@ -21250,30 +21352,56 @@ pure-Python.") (define-public python2-sortedcontainers (package-with-python2 python-sortedcontainers)) -(define-public python-cloudpickle +(define python-cloudpickle-testpkg (package - (name "python-cloudpickle") - (version "1.3.0") + (name "python-cloudpickle-testpkg") + (version "1.6.0") (source (origin - (method url-fetch) - (uri (pypi-uri "cloudpickle" version)) + ;; Archive on pypi does not include test infrastructure. + (method git-fetch) + (uri (git-reference + (url "https://github.com/cloudpipe/cloudpickle") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) (sha256 (base32 - "0lx7gy9clp427qwcm7b23zdsldpr03gy3vxxhyi8fpbhwz859brq")))) + "1584d21d4rcpryn8yfz0pjnjprk4zm367m0razdcz8cjbsh0dxp6")))) (build-system python-build-system) (arguments - '(#:phases (modify-phases %standard-phases - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (if tests? - (invoke "pytest" "-s" "-vv") - (format #t "test suite not run~%"))))))) + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'chdir + (lambda _ (chdir "tests/cloudpickle_testpkg")))))) + (home-page "https://github.com/cloudpipe/cloudpickle") + (synopsis "Extended pickling support for Python objects") + (description + "Cloudpickle makes it possible to serialize Python constructs not +supported by the default pickle module from the Python standard library. It +is especially useful for cluster computing where Python expressions are +shipped over the network to execute on remote hosts, possibly close to the +data.") + (license license:bsd-3))) + +(define-public python-cloudpickle + (package + (inherit python-cloudpickle-testpkg) + (name "python-cloudpickle") + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (if tests? + (invoke "pytest" "-s" "-vv") + (format #t "test suite not run~%"))))))) (native-inputs `(;; For tests. + ("python-cloudpickle-testpkg" ,python-cloudpickle-testpkg) ("python-psutil" ,python-psutil) ("python-pytest" ,python-pytest) - ("python-tornado" ,python-tornado))) + ("python-tornado" ,python-tornado-6))) (home-page "https://github.com/cloudpipe/cloudpickle") (synopsis "Extended pickling support for Python objects") (description @@ -21288,9 +21416,20 @@ data.") (define-public python2-cloudpickle (let ((base (package-with-python2 (strip-python2-variant python-cloudpickle)))) (package/inherit base + (version "1.3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cloudpickle" version)) + (sha256 + (base32 + "0lx7gy9clp427qwcm7b23zdsldpr03gy3vxxhyi8fpbhwz859brq")))) (native-inputs - `(("python-mock" ,python2-mock) - ,@(package-native-inputs base))) + `(;; For tests. + ("python-mock" ,python2-mock) + ("python-psutil" ,python2-psutil) + ("python-pytest" ,python2-pytest) + ("python-tornado" ,python2-tornado))) (propagated-inputs `(("python-futures" ,python2-futures) ,@(package-propagated-inputs base)))))) @@ -21354,14 +21493,14 @@ This Python package wraps the Blosc library.") (define-public python-partd (package (name "python-partd") - (version "0.3.9") + (version "1.2.0") (source (origin (method url-fetch) (uri (pypi-uri "partd" version)) (sha256 (base32 - "0sz6rwlnl4fqq220pyz863cnv0gjdxl4m7lscl71ishl5z0xkmhz")))) + "1sy3vdfyyx3bc5590zb7gwpsmimqz8m992x9hsydq8nmhixqjrxa")))) (build-system python-build-system) (propagated-inputs `(("python-blosc" ,python-blosc) @@ -21401,13 +21540,13 @@ decisions with any given backend.") (define-public python-dask (package (name "python-dask") - (version "2.14.0") + (version "2021.7.1") (source (origin (method url-fetch) (uri (pypi-uri "dask" version)) (sha256 - (base32 "031j0j26s0675v0isyps2dphm03330n7dy8ifdy70jgvf78d119q")))) + (base32 "131c1bp193d7wp4gx09j6wark1c322c8sqjy22i0jaafl5rqfbz7")))) (build-system python-build-system) (arguments `(#:phases @@ -21418,14 +21557,7 @@ decisions with any given backend.") (substitute* "dask/tests/test_threaded.py" (("def test_interrupt\\(\\)" m) (string-append "@pytest.mark.skip(reason=\"Disabled by Guix\")\n" - m))) - ;; This one fails with a type error: - ;; TypeError: Already tz-aware, use tz_convert to convert. - (substitute* "dask/dataframe/tests/test_shuffle.py" - (("def test_set_index_timestamp\\(\\)" m) - (string-append "@pytest.mark.skip(reason=\"Disabled by Guix\")\n" - m))) - #t)) + m))))) (replace 'check (lambda _ (invoke "pytest" "-vv")))))) (propagated-inputs @@ -25878,3 +26010,25 @@ result.") "This packages provides a docutils-compatibility bridge to CommonMark, enabling you to write CommonMark inside of Docutils & Sphinx projects.") (license license:expat))) + +(define-public python-pyhull + (package + (name "python-pyhull") + (version "2015.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyhull" version)) + (sha256 + (base32 + "091sph52c4yk1jlm5w8xidxpzbia9r7s42bnb23q4m4b56ihmzyj")))) + (build-system python-build-system) + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (home-page "https://github.com/materialsvirtuallab/pyhull") + (synopsis "Python wrapper to Qhull") + (description + "This package provides a Python wrapper to @uref{http://www.qhull.org/, +Qhull} for the computation of the convex hull, Delaunay triangulation, and +Voronoi diagram.") + (license license:expat))) |