diff options
Diffstat (limited to 'gnu/packages/python-xyz.scm')
| -rw-r--r-- | gnu/packages/python-xyz.scm | 1171 |
1 files changed, 896 insertions, 275 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index f8f0a6552d..f4cba62777 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -56,6 +56,7 @@ ;;; Copyright © 2018, 2019, 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com> ;;; Copyright © 2018 Luther Thompson <lutheroto@gmail.com> ;;; Copyright © 2018 Vagrant Cascadian <vagrant@debian.org> +;;; Copyright © 2015, 2018 Pjotr Prins <pjotr.guix@thebird.nl> ;;; Copyright © 2019, 2020 Brett Gilio <brettg@gnu.org> ;;; Copyright © 2019 Sam <smbaines8@gmail.com> ;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us> @@ -87,6 +88,11 @@ ;;; Copyright © 2020 Malte Frank Gerdes <malte.f.gerdes@gmail.com> ;;; Copyright © 2020 Joseph LaFreniere <joseph@lafreniere.xyz> ;;; Copyright © 2020 Tim Gesthuizen <tim.gesthuizen@yahoo.de> +;;; Copyright © 2020 Bonface Munyoki Kilyungi <bonfacemunyoki@gmail.com> +;;; Copyright © 2020 Ekaitz Zarraga <ekaitz@elenq.tech> +;;; Copyright © 2020 Diego N. Barbato <dnbarbato@posteo.de> +;;; Copyright © 2020 Leo Prikler <leo.prikler@student.tugraz.at> +;;; Copyright © 2019 Kristian Trandem <kristian@devup.no> ;;; ;;; This file is part of GNU Guix. ;;; @@ -118,6 +124,8 @@ #:use-module (gnu packages crypto) #:use-module (gnu packages databases) #:use-module (gnu packages dbm) + #:use-module (gnu packages djvu) + #:use-module (gnu packages docker) #:use-module (gnu packages enchant) #:use-module (gnu packages file) #:use-module (gnu packages fontutils) @@ -136,7 +144,6 @@ #:use-module (gnu packages haskell-xyz) #:use-module (gnu packages icu4c) #:use-module (gnu packages image) - #:use-module (gnu packages imagemagick) #:use-module (gnu packages kerberos) #:use-module (gnu packages libevent) #:use-module (gnu packages libffi) @@ -161,6 +168,7 @@ #:use-module (gnu packages python-science) #:use-module (gnu packages python-web) #:use-module (gnu packages qt) + #:use-module (gnu packages rdf) #:use-module (gnu packages readline) #:use-module (gnu packages sdl) #:use-module (gnu packages search) @@ -176,6 +184,7 @@ #:use-module (gnu packages version-control) #:use-module (gnu packages video) #:use-module (gnu packages web) + #:use-module (gnu packages wxwidgets) #:use-module (gnu packages base) #:use-module (gnu packages xml) #:use-module (gnu packages xorg) @@ -946,9 +955,6 @@ to users of that module.") ;; by the Expat license. (license (list license:isc license:expat)))) -(define-public python2-netcdf4 - (package-with-python2 python-netcdf4)) - (define-public python-license-expression (package (name "python-license-expression") @@ -1783,6 +1789,32 @@ human-friendly syntax.") (define-public python2-schedule (package-with-python2 python-schedule)) +(define-public python-scour + (package + (name "python-scour") + (version "038.1") + (source + (origin + (method git-fetch) + (uri + (git-reference + (url "https://github.com/scour-project/scour") + (commit + (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0rgiypb9ig8x4rl3hfzpy7kwnx1q3064nvlrv4fk0dnp84girn0v")))) + (propagated-inputs + `(("python-six" ,python-six))) + (build-system python-build-system) + (home-page "https://github.com/scour-project/scour") + (synopsis "Scour is an SVG optimizer/cleaner written in Python") + (description "The goal of Scour is to output a file that renderes +identically at a fraction of the size by removing a lot of redundant +information created by most SVG editors. Optimization options are typically +lossless but can be tweaked for more aggressive cleaning.") + (license license:asl2.0))) + (define-public python-mechanize (package (name "python-mechanize") @@ -1808,6 +1840,30 @@ after Andy Lester’s Perl module WWW::Mechanize.") (define-public python2-mechanize (package-with-python2 python-mechanize)) +(define-public python-simpleaudio + (package + (name "python-simpleaudio") + (version "1.0.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "simpleaudio" version)) + (sha256 + (base32 + "07glihg0fpca0gvbbvqs9q815w8xhflzdvg72yvlsm23j9j8h739")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) + (inputs + `(("alsa-lib" ,alsa-lib))) + (home-page + "https://github.com/hamiltron/py-simple-audio") + (synopsis "Simple, asynchronous audio playback for Python 3") + (description + "The @code{simplaudio} package provides cross-platform, dependency-free +audio playback capability for Python 3 on OSX, Windows, and Linux.") + (license license:expat))) ; MIT license + (define-public python-simplejson (package (name "python-simplejson") @@ -3398,8 +3454,11 @@ structure for Python.") (synopsis "Python Documentation Utilities") (description "Docutils is a modular system for processing documentation into useful -formats, such as HTML, XML, and LaTeX. For input Docutils supports -reStructuredText.") +formats, such as HTML, XML, and LaTeX. It uses @dfn{reStructuredText}, an +easy to use markup language, for input. + +This package provides tools for converting @file{.rst} files to other formats +via commands such as @command{rst2man}, as well as supporting Python code.") ;; Most of the source code is public domain, but some source files are ;; licensed under the PFSL, BSD 2-clause, and GPLv3+ licenses. (license (list license:public-domain license:psfl license:bsd-2 license:gpl3+)))) @@ -3648,7 +3707,7 @@ ecosystem, but can naturally be used also by other projects.") (define-public python-robotframework (package (name "python-robotframework") - (version "3.1.2") + (version "3.2.2") ;; There are no tests in the PyPI archive. (source (origin @@ -3658,9 +3717,9 @@ ecosystem, but can naturally be used also by other projects.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "16gnxy0qinh8fhs0qvhff5z2xh49c3cqgm0d7bfjw120df6x7fym")) + (base32 "0if0h3myb9m3hgmn1phrhq8pfp89kfqsaq32vmfdjkyjdj7y59ds")) (patches (search-patches - "python-robotframework-honor-source-date-epoch.patch")))) + "python-robotframework-source-date-epoch.patch")))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases @@ -3675,12 +3734,23 @@ ecosystem, but can naturally be used also by other projects.") (string-append doc "/libraries")) #t))) (replace 'check - (lambda _ + (lambda* (#:key inputs #:allow-other-keys) + ;; Some tests require timezone data. Otherwise, they + ;; look up /etc/localtime, which doesn't exist, and fail + ;; with: + ;; + ;; OverflowError: mktime argument out of range + (setenv "TZDIR" + (string-append (assoc-ref inputs "tzdata") + "/share/zoneinfo")) + (setenv "TZ" "Europe/Paris") + (invoke "python" "utest/run.py")))))) (native-inputs `(("python-invoke" ,python-invoke) ("python-rellu" ,python-rellu) - ("python:tk" ,python "tk"))) ;used when building the HTML doc + ("python:tk" ,python "tk") ;used when building the HTML doc + ("tzdata" ,tzdata-for-tests))) (outputs '("out" "doc")) (home-page "https://robotframework.org") (synopsis "Generic automation framework") @@ -3694,11 +3764,12 @@ process automation (RPA).") ;; to the 0.9 stable release available from PyPI. The tests are not ;; included in the PyPI archive, so we fetch the sources from the upstream ;; Git repo. - (let ((commit "e851879bab1f63e4e53b34a4dc8a67ed95102830") - (revision "1")) + (let ((commit "b0619ac58a8b1be125f9c98856a664594614570f") + (revision "0")) (package (name "python-robotframework-lint") - (version (git-version "0.9.0" revision commit)) + (version (git-version "1.1" ;version taken from 'rflint/version.py' + revision commit)) (source (origin (method git-fetch) @@ -3708,7 +3779,7 @@ process automation (RPA).") (file-name (git-file-name name version)) (sha256 (base32 - "1p6fknqg5sb9qz5857ji4a877657vgfjm5v3zn45994parx6ml1m")))) + "180npmvzqync25b2scs878gv8q4y17dsinxyjcc10bw22msfap6b")))) (build-system python-build-system) (arguments `(#:phases @@ -3810,14 +3881,13 @@ outside the standard library.") (define-public python-scp (package (name "python-scp") - (version "0.13.2") + (version "0.13.3") (source (origin (method url-fetch) (uri (pypi-uri "scp" version)) (sha256 - (base32 - "1crlpw9lnn58fs1c1rmh7s7s9y5gkgpgjsqlvg9qa51kq1knx7gg")))) + (base32 "1m2v09m407p097cy3xy5rxicqfzrqjwf8v5rd4qhfqkk7lllimwb")))) (build-system python-build-system) (arguments '(#:tests? #f)) ;tests require an SSH server @@ -3859,6 +3929,30 @@ augment the changelog, but it can be used for other documents, too.") (define-public python2-rst.linker (package-with-python2 python-rst.linker)) +(define-public python-sshpubkeys + (package + (name "python-sshpubkeys") + (version "3.1.0") + (home-page "https://github.com/ojarva/python-sshpubkeys") + (source (origin + (method git-fetch) + (uri (git-reference + (url home-page) + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1h4gwmcfn84kkqh83km1vfz8sc5kr2g4gzgzmr8gz704jmqiv7nq")))) + (build-system python-build-system) + (propagated-inputs + `(("python-cryptography" ,python-cryptography) + ("python-ecdsa" ,python-ecdsa))) + (synopsis "OpenSSH public key parser") + (description + "This package provides a library for parsing and validating OpenSSH +public key files.") + (license license:bsd-3))) + (define-public python-feedgenerator (package (name "python-feedgenerator") @@ -3917,19 +4011,19 @@ Language (TOML) configuration files.") (define-public python-jsonrpc-server (package (name "python-jsonrpc-server") - (version "0.3.4") + (version "0.4.0") (source (origin (method url-fetch) (uri (pypi-uri "python-jsonrpc-server" version)) (sha256 (base32 - "0dzya99nbi4mw7q85vmyw1wfgbx5dpmysnvm0bwx5m4xbi4zafy7")))) + "1585ybn3djvx5r5zbxkzlhz2wb1d47y4wrfwaxdyq0gi87jl7ib2")))) (build-system python-build-system) (propagated-inputs `(("python-mock" ,python-mock) ("python-pytest" ,python-pytest) - ("python-ujson" ,python-ujson-1))) + ("python-ujson" ,python-ujson))) (home-page "https://github.com/palantir/python-jsonrpc-server") (synopsis "JSON RPC 2.0 server library") @@ -4000,28 +4094,39 @@ Server (PLS).") (define-public python-language-server (package (name "python-language-server") - (version "0.34.1") + (version "0.36.1") (source (origin (method url-fetch) (uri (pypi-uri "python-language-server" version)) (sha256 (base32 - "0gfjjlj7yg2nf8wkbrshwaljkwlqja4n7s1x949f495anmkg8vxr")))) + "0ljzc50z5v08is8fis1fg2dk9sb6275jlvzxb6nij0w6ys772pf8")))) (build-system python-build-system) (propagated-inputs - `(("python-pluggy" ,python-pluggy) - ("python-jsonrpc-server" ,python-jsonrpc-server) - ("python-jedi" ,python-jedi) - ("python-yapf" ,python-yapf) - ("python-pyflakes" ,python-pyflakes) + `(("python-autopep8" ,python-autopep8) + ("python-configparser" ,python-configparser) ("python-pydocstyle" ,python-pydocstyle) + ("python-future" ,python-future) + ("python-jedi" ,python-jedi) + ("python-jsonrpc-server" ,python-jsonrpc-server) + ("python-pluggy" ,python-pluggy) ("python-pycodestyle" ,python-pycodestyle) - ("python-mccabe" ,python-mccabe) + ("python-pyflakes" ,python-pyflakes) ("python-rope" ,python-rope) - ("python-autopep8" ,python-autopep8) - ("python-flake8" ,python-flake8) - ("python-pylint" ,python-pylint))) + ("python-ujson" ,python-ujson) + ("python-yapf" ,python-yapf))) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-flaky" ,python-flaky) + ("python-matplotlib" ,python-matplotlib) + ("python-mock" ,python-mock) + ("python-numpy" ,python-numpy) + ("python-pandas" ,python-pandas) + ("python-pylint" ,python-pylint) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-versioneer" ,python-versioneer))) (home-page "https://github.com/palantir/python-language-server") (synopsis "Python implementation of the Language Server Protocol") (description @@ -4053,14 +4158,14 @@ matching of file paths.") (define-public python-black (package (name "python-black") - (version "19.10b0") + (version "20.8b1") (source (origin (method url-fetch) (uri (pypi-uri "black" version)) (sha256 (base32 - "0f8mr0yzj78q1dx7v6ggbgfir2wv0n5z2shfbbvfdq7910xbgvf2")))) + "1spv6sldp3mcxr740dh3ywp25lly9s8qlvs946fin44rl1x5a0hw")))) (build-system python-build-system) (arguments `(#:phases @@ -4078,7 +4183,11 @@ matching of file paths.") ""))))) #t)) (add-after 'unpack 'disable-broken-tests - (lambda _ + (lambda* (#:key outputs inputs #:allow-other-keys) + ;; Make installed package available for running the tests + (setenv "PATH" (string-append (assoc-ref outputs "out") "/bin" + ":" (getenv "PATH"))) + ;; These tests are supposed to be skipped when the blackd ;; dependencies are missing, but this doesn't quite work. (substitute* "tests/test_black.py" @@ -4092,15 +4201,21 @@ matching of file paths.") (substitute* "tests/test_black.py" (("( *)def test_self" match indent) (string-append indent "@unittest.skip(\"guix\")\n" match))) + + (substitute* "tests/test_black.py" + (("( *)def test_python38" match indent) + (string-append indent "@unittest.skip(\"guix\")\n" match))) #t))))) (propagated-inputs `(("python-click" ,python-click) ("python-attrs" ,python-attrs) ("python-appdirs" ,python-appdirs) ("python-pathspec" ,python-pathspec) + ("python-mypy-extensions" ,python-mypy-extensions) ("python-regex" ,python-regex) ("python-toml" ,python-toml) - ("python-typed-ast" ,python-typed-ast))) + ("python-typed-ast" ,python-typed-ast) + ("python-typing-extensions" ,python-typing-extensions))) (native-inputs `(("python-setuptools-scm" ,python-setuptools-scm))) (home-page "https://github.com/ambv/black") @@ -4916,7 +5031,6 @@ convert between colorspaces like sRGB, XYZ, CIEL*a*b*, CIECAM02, CAM02-UCS, etc. ("python-cairocffi" ,python-cairocffi))) (inputs `(("libpng" ,libpng) - ("imagemagick" ,imagemagick) ("freetype" ,freetype) ("cairo" ,cairo) ("glib" ,glib) @@ -4991,6 +5105,9 @@ convert between colorspaces like sRGB, XYZ, CIEL*a*b*, CIECAM02, CAM02-UCS, etc. ;; has not effect. (setenv "LD_LIBRARY_PATH" (string-append cairo "/lib")) (setenv "HOME" (getcwd)) + ;; Fix rounding errors when using the x87 FPU. + (when (string-prefix? "i686" ,(%current-system)) + (setenv "CFLAGS" "-ffloat-store")) (call-with-output-file "setup.cfg" (lambda (port) (format port "[directories]~% @@ -5550,14 +5667,14 @@ the OleFileIO module from PIL, the Python Image Library.") (define-public python-pillow (package (name "python-pillow") - (version "6.2.1") + (version "8.0.1") (source (origin (method url-fetch) (uri (pypi-uri "Pillow" version)) (sha256 (base32 - "1c8wkzc58f5wdh006jvmwdk3wxld1xgagcbdvj7iv17qi0m9fkmz")))) + "17pv0flaqqfld9m4lz8ayxyqb11gbbmr7w04mw4ar79cn3lwdi8i")))) (build-system python-build-system) (native-inputs `(("python-pytest" ,python-pytest))) @@ -5597,12 +5714,24 @@ efficient internal representation, and fairly powerful image processing capabilities. The core image library is designed for fast access to data stored in a few basic pixel formats. It should provide a solid foundation for a general image processing tool.") + (properties `((python2-variant . ,(delay python2-pillow)))) (license (license:x11-style "http://www.pythonware.com/products/pil/license.htm" "The PIL Software License")))) (define-public python2-pillow - (package-with-python2 python-pillow)) + (package-with-python2 + (package + (inherit (strip-python2-variant python-pillow)) + ;; Version 6 is the last series with Python 2 support. + (version "6.2.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Pillow" version)) + (sha256 + (base32 + "0l5rv8jkdrb5q846v60v03mcq64yrhklidjkgwv6s1pda71g17yv"))))))) (define-public python-pillow-2.9 (package @@ -5776,6 +5905,28 @@ a front-end for C compilers or analysis tools.") (define-public python2-pycparser (package-with-python2 python-pycparser)) +(define-public python-xlsxwriter + (package + (name "python-xlsxwriter") + (version "1.3.7") + (source + (origin + ;; There are no tests in the PyPI tarball. + (method git-fetch) + (uri (git-reference + (url "https://github.com/jmcnamara/XlsxWriter") + (commit (string-append "RELEASE_" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1qg40r2mwrqfmhaxnary1cfgi0dwwazp5qga7c9p2cdji2v0x5rm")))) + (build-system python-build-system) + (home-page "https://github.com/jmcnamara/XlsxWriter") + (synopsis "Python module for creating Excel XLSX files") + (description + "XlsxWriter is a Python module that can be used to write text, numbers, +formulas and hyperlinks to multiple worksheets in an Excel 2007+ XLSX file.") + (license license:bsd-2))) + (define-public python-pywavelets (package (name "python-pywavelets") @@ -8062,27 +8213,6 @@ PEP 8.") (define-public python2-pyflakes (package-with-python2 python-pyflakes)) -;; Flake8 2.6 requires an older version of pyflakes. -;; This should be removed ASAP. -(define-public python-pyflakes-1.2 - (package (inherit python-pyflakes) - (version "1.2.3") - (source - (origin - (method url-fetch) - (uri (pypi-uri "pyflakes" version)) - (sha256 - (base32 - "17hkw8yd44cr8fz13phy4aih3r5j2p7ild4zlvqdh2c8dmiinjif")))) - (arguments - '(#:phases - (modify-phases %standard-phases - ;; This one test fails. - (replace 'check - (lambda _ (invoke "pytest" "-vv" "-k" "not test_f_string")))))) - (native-inputs - `(("python-pytest" ,python-pytest))))) - (define-public python-mccabe (package (name "python-mccabe") @@ -8108,39 +8238,6 @@ complexity of Python source code.") (define-public python2-mccabe (package-with-python2 python-mccabe)) -(define-public python-mccabe-0.2.1 - (package (inherit python-mccabe) - (version "0.2.1") - (source - (origin - (method url-fetch) - (uri (pypi-uri "mccabe" version)) - (sha256 - (base32 - "0fi4a81kr5bcv5p4xgibqr595hyj5dafkqgsmfk96mfy8w71fajs")))))) - -(define-public python2-mccabe-0.2.1 - (package-with-python2 python-mccabe-0.2.1)) - -;; Flake8 2.4.1 requires an older version of pep8. -;; This should be removed ASAP. -(define-public python-pep8-1.5.7 - (package (inherit python-pep8) - (version "1.5.7") - (source - (origin - (method url-fetch) - (uri (pypi-uri "pep8" version)) - (sha256 - (base32 - "12b9bbdbwnspxgak14xg58c130x2n0blxzlms5jn2dszn8qj3d0m")))) - (arguments - ;; XXX Tests not compatible with Python 3.5. - '(#:tests? #f)))) - -(define-public python2-pep8-1.5.7 - (package-with-python2 python-pep8-1.5.7)) - (define-public python-flake8 (package (name "python-flake8") @@ -8187,40 +8284,6 @@ complexity of Python source code.") ("python2-typing" ,python2-typing) ,@(package-propagated-inputs base)))))) -;; python-hacking requires flake8 <2.7.0. -(define-public python-flake8-2.6 - (package - (inherit python-flake8) - (version "2.6.2") - (source (origin - (method url-fetch) - (uri (pypi-uri "flake8" version)) - (sha256 - (base32 - "0y57hzal0j84dh9i1g1g6dc4aywvrnhy2fjmmbglpv5ajihxh713")))) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'use-later-pycodestyles - (lambda __ - (substitute* '("flake8.egg-info/requires.txt" - "setup.py") - (("pycodestyle >= 2.0, < 2.1") - "pycodestyle >= 2.0")) - #t)) - (delete 'check) - (add-after 'install 'check - (lambda* (#:key inputs outputs #:allow-other-keys) - (add-installed-pythonpath inputs outputs) - (invoke "pytest" "-v") - #t))))) - (propagated-inputs - `(("python-pep8" ,python-pep8) - ("python-pycodestyle" ,python-pycodestyle) - ("python-entrypoints" ,python-entrypoints) - ("python-pyflakes" ,python-pyflakes-1.2) - ("python-mccabe" ,python-mccabe))))) - (define-public python-flake8-bugbear (package (name "python-flake8-bugbear") @@ -8648,6 +8711,26 @@ should be stored on various operating systems.") (define-public python2-appdirs (package-with-python2 python-appdirs)) +(define-public python-gorilla + (package + (name "python-gorilla") + (version "0.3.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "gorilla" version)) + (sha256 + (base32 + "0b40blcp6fih4nvqbilra4qw1dfccv1ahjmr41ac4d9rjadqkcpy")))) + (build-system python-build-system) + (home-page "https://github.com/christophercrouzet/gorilla") + (synopsis "Convenient monkey patching with Python") + (description + "Gorilla is a Python library that provides a convenient approach to +monkey patching. Monkey patching is the process of modifying module and +class attributes at runtime with the purpose of replacing or extending +third-party code.") + (license license:expat))) + (define-public python-llfuse (package (name "python-llfuse") @@ -8844,6 +8927,32 @@ Supported netlink families and protocols include: (define-public python2-wrapt (package-with-python2 python-wrapt)) +(define-public python-commonmark + (package + (name "python-commonmark") + (version "0.9.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "commonmark" version)) + (sha256 + (base32 "0q7d39lm8kcingpmykk5r959hrwwj6v2icyw3mihczxyb749sbs5")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (invoke "python" "setup.py" "test")))))) + (home-page "https://github.com/readthedocs/commonmark.py") + (synopsis "Python parser for the CommonMark Markdown spec") + (description + "This module is a pure Python port of jgm's @code{commonmark.js}, a +Markdown parser and renderer for the CommonMark specification, using only +native modules.") + (license license:bsd-3))) + (define-public python-xlrd (package (name "python-xlrd") @@ -10820,14 +10929,13 @@ for the module to work under Python 3.3.") (define-public python-colorama (package (name "python-colorama") - (version "0.4.3") + (version "0.4.4") (source (origin (method url-fetch) (uri (pypi-uri "colorama" version)) (sha256 - (base32 - "189n8hpijy14jfan4ha9f5n06mnl33cxz7ay92wjqgkr639s0vg9")))) + (base32 "16w62sm95hmh55rqxn4zwdz0bkh3fqm1qnz9cwi3s510iasb4har")))) (build-system python-build-system) (synopsis "Colored terminal text rendering for Python") (description "Colorama is a Python library for rendering colored terminal @@ -10838,6 +10946,73 @@ text.") (define-public python2-colorama (package-with-python2 python-colorama)) +(define-public python-moto + (package + (name "python-moto") + ;; XXX: Use a pre-release for compatibility with latest botocore & friends. + (version "1.3.16.dev134") + (source (origin + (method url-fetch) + (uri (pypi-uri "moto" version)) + (sha256 + (base32 + "1pix0c7zszjwzfy88n1rpih9vkdm25nqcvz93z850xvgwb4v81bd")))) + (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (add-after 'unpack 'patch-hardcoded-executable-names + (lambda _ + (substitute* "moto/batch/models.py" + (("/bin/sh") + (which "sh"))) + (substitute* (find-files "tests" "\\.py$") + (("#!/bin/bash") + (string-append "#!" (which "bash")))) + #t)) + (replace 'check + (lambda _ + (setenv "PYTHONPATH" (string-append "./build/lib:" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-vv" "-m" "not network" + ;; These tests require Docker. + "-k" "not test_terminate_job \ +and not test_invoke_function_from_sqs_exception")))))) + (native-inputs + `(("python-flask" ,python-flask) + ("python-flask-cors" ,python-flask-cors) + ("python-freezegun" ,python-freezegun) + ("python-parameterized" ,python-parameterized) + ("python-pytest" ,python-pytest) + ("python-sure" ,python-sure))) + (propagated-inputs + `(("python-aws-xray-sdk" ,python-aws-xray-sdk) + ("python-boto" ,python-boto) + ("python-boto3" ,python-boto3) + ("python-botocore" ,python-botocore) + ("python-cfn-lint" ,python-cfn-lint) + ("python-cryptography" ,python-cryptography) + ("python-dateutil" ,python-dateutil) + ("python-docker" ,python-docker) + ("python-idna" ,python-idna) + ("python-jinja2" ,python-jinja2) + ("python-jose" ,python-jose) + ("python-jsondiff" ,python-jsondiff) + ("python-mock" ,python-mock) + ("python-pytz" ,python-pytz) + ("python-pyyaml" ,python-pyyaml) + ("python-requests" ,python-requests) + ("python-responses" ,python-responses) + ("python-six" ,python-six) + ("python-sshpubkeys" ,python-sshpubkeys) + ("python-werkzeug" ,python-werkzeug) + ("python-xmltodict" ,python-xmltodict))) + (home-page "https://github.com/spulec/moto") + (synopsis "Mock out the boto library") + (description + "@code{moto} is a library designed to easily mock out the +@code{boto} library.") + (license license:asl2.0))) + (define-public python-rsa (package (name "python-rsa") @@ -10993,32 +11168,55 @@ document.") manipulation library.") (license license:expat))) +(define-public python-boto + (package + (name "python-boto") + (version "2.49.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "boto" version)) + (sha256 + (base32 + "0njy09c4wjx7ipxhwi6vv404nflyiasl78vwwxxpclnql903n3ga")))) + (build-system python-build-system) + (arguments + ;; XXX: This package is unmaintained and has problems with newer versions + ;; of Python 3 as well as test libraries. 'python-moto' still uses a + ;; subset of this library, so keep it around for now, but disable tests. + '(#:tests? #f)) + (propagated-inputs + `(("python-paramiko" ,python-paramiko) + ("python-requests" ,python-requests))) + (home-page "https://github.com/boto/boto") + (synopsis "Python interfaces for Amazon Web Services") + (description + "This package provides various facilities for interacting with Amazon +Web Services through Python. + +This software is unmaintained, and new projects should use @code{boto3} instead.") + (license license:expat))) + (define-public python-botocore + ;; Note: When updating botocore, also make sure that boto3 and awscli + ;; are compatible. (package (name "python-botocore") - (version "1.15.26") + (version "1.19.22") (source (origin (method url-fetch) (uri (pypi-uri "botocore" version)) (sha256 (base32 - "1a87pbwkk5vlwz92hy1wizfnpiwn11bhaicr6bmji1i5ybwdhnr8")))) + "0iim86x7c6hqmvd61ygz6x6x9glnsfbnyzv2y67qjdcdx8jpkmw7")))) (build-system python-build-system) (arguments ;; FIXME: Many tests are failing. '(#:tests? #f)) (propagated-inputs `(("python-dateutil" ,python-dateutil) - ("python-docutils" ,python-docutils) - ("python-jmespath" ,python-jmespath))) - (native-inputs - `(("python-mock" ,python-mock) - ("python-nose" ,python-nose) - ("behave" ,behave) - ("python-tox" ,python-tox) - ("python-urllib3" ,python-urllib3) - ("python-wheel" ,python-wheel))) + ("python-jmespath" ,python-jmespath) + ("python-urllib3" ,python-urllib3))) (home-page "https://github.com/boto/botocore") (synopsis "Low-level interface to AWS") (description "Botocore is a Python library that provides a low-level @@ -11028,6 +11226,40 @@ interface to the Amazon Web Services (AWS) API.") (define-public python2-botocore (package-with-python2 python-botocore)) +(define-public python-boto3 + (package + (name "python-boto3") + (version "1.16.22") + (home-page "https://github.com/boto/boto3") + (source (origin + (method git-fetch) + (uri (git-reference (url home-page) (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0h20hgl4yfl58g75qhb6ibrdmzn47md3srgar7hask14cjmfhfy3")))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'delete-network-tests + ;; Deleting integration tests because they are trying to connect to AWS. + (lambda _ + (delete-file-recursively "tests/integration") + #t))))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose) + ("python-mock" ,python-mock))) + (propagated-inputs + `(("python-botocore" ,python-botocore) + ("python-jmespath" ,python-jmespath) + ("python-s3transfer" ,python-s3transfer))) + (synopsis "AWS SDK for Python") + (description + "Boto3 is a Python library for writing programs that interact with +@acronym{AWS,Amazon Web Services}.") + (license license:asl2.0))) + (define-public python-pyfiglet (package (name "python-pyfiglet") @@ -14635,22 +14867,20 @@ converting text with ANSI color codes to HTML or LaTeX.") (define-public python-ddt (package (name "python-ddt") - (version "1.1.3") + (version "1.4.1") (source (origin (method url-fetch) (uri (pypi-uri "ddt" version)) (sha256 (base32 - "1lw17420iimhghkgzgax85nn8d1an2d6k2cfvb7j5kwn2dqlr1vk")))) + "1niqpzc26sxdbyi46r07n4pma5fjx6crww2539vpfmsf0w6yg585")))) (build-system python-build-system) (native-inputs - `(("python-mock" ,python-mock) - ("python-nose" ,python-nose))) + `(("python-pytest" ,python-pytest))) (propagated-inputs - `(("python-six" ,python-six) - ("python-pyyaml" ,python-pyyaml))) - (home-page "https://github.com/txels/ddt") + `(("python-pyyaml" ,python-pyyaml))) + (home-page "https://github.com/datadriventests/ddt") (synopsis "Data-Driven Tests") (description "Data-Driven Tests (@dfn{DDT}) allow you to multiply one test case by @@ -14658,9 +14888,6 @@ running it with different test data, and make it appear as multiple test cases.") (license license:expat))) -(define-public python2-ddt - (package-with-python2 python-ddt)) - (define-public python-pycountry (package (name "python-pycountry") @@ -14801,13 +15028,13 @@ projects.") (package (name "python-invoke") (home-page "https://www.pyinvoke.org/") - (version "1.3.0") + (version "1.4.1") (source (origin (method url-fetch) (uri (pypi-uri "invoke" version)) (sha256 (base32 - "1nn7gad0rvy492acpyhkrp01zsk86acf34qhsvq4xmm6x39788n5")))) + "0pg1lpl4583z83i12262v72y1a4cxdcxi7vqhl8dpqv9wszj6gyy")))) (build-system python-build-system) (arguments ;; XXX: Requires many dependencies that are not yet in Guix. @@ -15188,14 +15415,14 @@ builds partial trees by inspecting living objects.") (define-public python-isbnlib (package (name "python-isbnlib") - (version "3.10.3") + (version "3.10.4") (source (origin (method url-fetch) (uri (pypi-uri "isbnlib" version)) (sha256 (base32 - "07qhykv0x60d5rsx5pj6s4q15ri4znczscll3xmpf6gyclac1592")))) + "0iin0x2xqwyphyyzd0mzrq5v5xm7b6dlbb294k4dywra5qvbrgzm")))) (build-system python-build-system) (arguments '(#:tests? #f)) ; No test (home-page "https://github.com/xlcnd/isbnlib") @@ -15292,13 +15519,13 @@ in other versions.") (define-public python-mamba (package (name "python-mamba") - (version "0.11.1") + (version "0.11.2") (source (origin (method url-fetch) (uri (pypi-uri "mamba" version)) (sha256 (base32 - "1jxy3bva94ac02a0wjsms79rp5104zmalxh8rhqqg6mw95cp6xpr")))) + "15m4dpnpv9m60pdaygvwgi43fwqaivs3qxfxhspwrp47sbgwdkvm")))) (build-system python-build-system) (arguments `(#:tests? #f)) ; No test (propagated-inputs @@ -15954,7 +16181,7 @@ by path in a JSON document (see RFC 6901).") (base32 "0k9pff06lxama3nhsc7cdxbp83422bdy8ifs52i6xkas8hpyzfzr")))) (build-system python-build-system) - (native-inputs + (propagated-inputs `(("python-jsonpointer" ,python-jsonpointer))) (home-page "https://github.com/stefankoegl/python-json-patch") (synopsis "Applying JSON Patches in Python 2.6+ and 3.x") @@ -16091,6 +16318,125 @@ and integration into other projects.") (propagated-inputs `(("python2-selectors2" ,python2-selectors2)))))) +(define-public python-bagit + (package + (name "python-bagit") + (version "1.7.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "bagit" version)) + (sha256 + (base32 + "1m6y04qmig0b5hzb35lnaw3d2yfydb7alyr1579yblvgs3da6j7j")))) + (build-system python-build-system) + (native-inputs + `(("python-setuptools-scm" ,python-setuptools-scm) + ("python-coverage" ,python-coverage) + ("python-mock" ,python-mock))) + (home-page "https://libraryofcongress.github.io/bagit-python/") + (synopsis "Create and validate BagIt packages") + (description "Bagit is a Python library and command line utility for working +with BagIt style packages. BagIt is a minimalist packaging format for digital +preservation.") + (license license:cc0))) + +(define-public python-prov + (package + (name "python-prov") + (version "2.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "prov" version)) + (sha256 + (base32 + "1vi2fj31vygfcqrkimdmk52q2ldw08g9fn4v4zlgdfgcjlhqyhxn")))) + (build-system python-build-system) + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-lxml" ,python-lxml) + ("python-networkx" ,python-networkx) + ("python-rdflib" ,python-rdflib))) + (native-inputs + `(("graphviz" ,graphviz) + ("python-pydot" ,python-pydot))) + (home-page "https://github.com/trungdong/prov") + (synopsis + "W3C Provenance Data Model supporting PROV-JSON, PROV-XML and PROV-O (RDF)") + (description + "This package provides a library for W3C Provenance Data Model supporting +PROV-O (RDF), PROV-XML, PROV-JSON import/export.") + (license license:expat))) + +(define-public python-arcp + (package + (name "python-arcp") + (version "0.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "arcp" version)) + (sha256 + (base32 + "1p8mfyjssa6pbn5dp6pyzv9yy6kwm2rz5jn2kjbq5vy9f9wsq5sw")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "http://arcp.readthedocs.io/") + (synopsis + "Archive and Package URI parser and generator") + (description + "@acronym{arcp, Archive and Package} provides functions for creating +@code{arcp_} URIs, which can be used for identifying or parsing hypermedia files +packaged in an archive or package, like a ZIP file. arcp URIs can be used to +consume or reference hypermedia resources bundled inside a file archive or an +application package, as well as to resolve URIs for archive resources within a +programmatic framework. This URI scheme provides mechanisms to generate a +unique base URI to represent the root of the archive, so that relative URI +references in a bundled resource can be resolved within the archive without +having to extract the archive content on the local file system. An arcp URI can +be used for purposes of isolation (e.g. when consuming multiple archives), +security constraints (avoiding \"climb out\" from the archive), or for +externally identiyfing sub-resources referenced by hypermedia formats.") + (license license:asl2.0))) + +(define-public python-shellescape + (package + (name "python-shellescape") + (version "3.8.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/chrissimpkins/shellescape") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0wzccxk139qx1lb2g70f5b2yh9zq15nr2mgvqdbfabg5zm0vf1qw")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? inputs outputs #:allow-other-keys) + (when tests? + (add-installed-pythonpath inputs outputs) + (invoke "python" "tests/test_shellescape.py")) + #t))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/chrissimpkins/shellescape") + (synopsis + "Shell escape a string to safely use it as a token in a shell command") + (description + "The shellescape Python module defines the @code{shellescape.quote()} +function that returns a shell-escaped version of a Python string. This is a +backport of the @code{shlex.quote()} function from Python 3.8 that makes it +accessible to users of Python 3 versions < 3.3 and all Python 2.x versions.") + (license license:expat))) + (define-public python-validators (package (name "python-validators") @@ -16179,14 +16525,14 @@ address is valid and really exists.") (define-public python-marshmallow (package (name "python-marshmallow") - (version "3.0.0b14") + (version "3.9.1") (source (origin (method url-fetch) (uri (pypi-uri "marshmallow" version)) (sha256 (base32 - "1digk3f5cfk7wmlka65mc7bzsd96pbsgcsvp6pimd5b4ff9zb5p3")))) + "0kizhh3mnhpa08wfnsv1gagy22bpxzxszgbiylkhpz1d8qvwrykk")))) (build-system python-build-system) (propagated-inputs `(("python-dateutil" ,python-dateutil) @@ -16201,40 +16547,45 @@ Python datatypes.") complex datatypes to and from native Python datatypes.") (license license:expat))) -(define-public python2-marshmallow - (package-with-python2 python-marshmallow)) - (define-public python-apispec (package (name "python-apispec") - (version "0.25.3") + (version "4.0.0") (source (origin (method url-fetch) (uri (pypi-uri "apispec" version)) (sha256 (base32 - "0kxa8723zbisx10363yh4mmmn4higxrspymbjfz5zq8f644zagm9")))) + "12n4w5zkn4drcn8izq68vmixmqvz6abviqkdn4ip0kaax3jjh3in")))) (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (add-after 'unpack 'disable-prance-tests + (lambda _ + ;; Disable validation tests since they require the + ;; optional 'prance' library which is not yet in Guix. + (substitute* "tests/test_ext_marshmallow_openapi.py" + (("def test_openapi_tools_validate.*" all) + (string-append "@pytest.mark.xfail\n" all))))) + (replace 'check + (lambda _ + (setenv "PYTHONPATH" + (string-append "./build/lib:" + (getenv "PYTHONPATH"))) + (invoke "pytest" "-vv")))))) (propagated-inputs `(("python-pyyaml" ,python-pyyaml))) (native-inputs `(("python-pytest" ,python-pytest) - ("python-flask" ,python-flask) - ("python-marshmallow" ,python-marshmallow) - ("python-tornado" ,python-tornado) - ("python-bottle" ,python-bottle) - ("python-mock" ,python-mock))) + ("python-marshmallow" ,python-marshmallow))) (home-page "https://github.com/marshmallow-code/apispec") - (synopsis "Swagger 2.0 API specification generator") + (synopsis "Swagger/OpenAPI specification generator") (description "@code{python-apispec} is a pluggable API specification -generator. Currently supports the OpenAPI specification (f.k.a. -Swagger 2.0).") +generator. It currently supports the OpenAPI specification, formerly known +as Swagger.") (license license:expat))) -(define-public python2-apispec - (package-with-python2 python-apispec)) - (define-public python-flasgger (package (name "python-flasgger") @@ -16282,9 +16633,6 @@ Swagger 2.0).") from your Flask project. It is a fork of Flask-Swagger.") (license license:expat))) -(define-public python2-flasgger - (package-with-python2 python-flasgger)) - (define-public python-swagger-spec-validator (package (name "python-swagger-spec-validator") @@ -16614,6 +16962,44 @@ ignoring formatting changes.") (define-public python2-pydiff (package-with-python2 python-pydiff)) +(define-public python-pydub + (package + (name "python-pydub") + (version "0.24.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pydub" version)) + (sha256 + (base32 + "0sfwfq7yjv4bl3yqbmizszscafvwf4zr40hzbsy7rclvzyznh333")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-ffmpeg-path + (lambda* (#:key inputs #:allow-other-keys) + (let ((ffmpeg (assoc-ref inputs "ffmpeg"))) + (substitute* '("pydub/utils.py") + (("return \"ffmpeg\"") + (string-append "return \"" ffmpeg "/bin/ffmpeg\"")) + (("return \"ffplay\"") + (string-append "return \"" ffmpeg "/bin/ffplay\"")) + (("return \"ffprobe\"") + (string-append "return \"" ffmpeg "/bin/ffprobe\"")) + (("warn\\(\"Couldn't find ff") "# warn\\(\"Couldn't find ff")) + #t)))))) + (home-page "https://pydub.com") + (inputs + `(("ffmpeg" ,ffmpeg))) + (propagated-inputs + `(("python-scipy" ,python-scipy))) + (synopsis "Manipulate audio with a high level interface in Python") + (description + "@code{pydub} makes it easy to manipulate audio in Python. It relies on +@code{ffmpeg} to open various audio formats.") + (license license:expat))) ; MIT license + (define-public python-tqdm (package (name "python-tqdm") @@ -17079,14 +17465,14 @@ such as figshare or Zenodo.") (base32 "183kg1rhzz3hqizvphkd8hlbf1zxfx8737zhfkmqzxi71jmdw7pd")))) (build-system python-build-system) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (delete-file "setup.cfg") + (invoke "py.test")))))) (native-inputs - `(("python-appdirs" ,python-appdirs) - ("python-distlib" ,python-distlib) - ("python-importlib-metadata" ,python-importlib-metadata) - ("python-filelock" ,python-filelock) - ("python-six" ,python-six) - ("python-tox" ,python-tox) - ("python-virtualenv" ,python-virtualenv))) + `(("python-pytest" ,python-pytest))) (home-page "https://github.com/k-bx/python-semver") (synopsis "Python helper for Semantic Versioning") (description "This package provides a Python library for @@ -17348,6 +17734,47 @@ style guide, even if the original code didn't violate the style guide.") (define-public python2-yapf (package-with-python2 python-yapf)) +(define-public python-yq + (package + (name "python-yq") + (version "2.11.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "yq" version)) + (sha256 + (base32 + "1q4rky0a6n4izmq7slb91a54g8swry1xrbfqxwc8lkd3hhvlxxkl")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "yq/__init__.py" + (("Popen\\(\\[\"jq") + (string-append + "Popen([\"" + (assoc-ref inputs "jq") + "/bin/jq"))) + #t))))) + (inputs + `(("python-argcomplete" ,python-argcomplete) + ("python-pyyaml" ,python-pyyaml) + ("python-xmltodict" ,python-xmltodict) + ("jq" ,jq))) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-flake8" ,python-flake8) + ("python-wheel" ,python-wheel))) + (home-page "https://github.com/kislyuk/yq") + (synopsis "Command-line YAML/XML processor") + (description + "This package provides @command{yq} and @command{xq} for processing YAML +and XML respectively. The processing is done through @{jq}, @command{jq} +filters can be used to process the data as it passes through.") + (license license:asl2.0))) + (define-public python-gyp (let ((commit "5e2b3ddde7cda5eb6bc09a5546a76b00e49d888f") (revision "0")) @@ -18084,6 +18511,109 @@ gevent-powered application.") (define-public python2-gipc (package-with-python2 python-gipc)) +(define-public python-beautifultable + (package + (name "python-beautifultable") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "beautifultable" version)) + (sha256 + (base32 + "0wwlbifcbpzy3wfv6yzsxncarsngzizmmxbn6cy5gazlcq7h4k5x")))) + (build-system python-build-system) + (propagated-inputs + `(("python-wcwidth" ,python-wcwidth))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-setup.py + (lambda _ + (substitute* "setup.py" + (("setup\\(") + "setup(\n test_suite=\"test\","))))))) + (home-page "https://github.com/pri22296/beautifultable") + (synopsis "Print ASCII tables for terminals") + (description "@code{python-beautifultable} provides a class for easily +printing tabular data in a visually appealing ASCII format to a terminal. + +Features include, but are not limited to: +@itemize +@item Full customization of the look and feel of the table +@item Row and column accessors. +@item Full support for colors using ANSI sequences or any library. +@item Plenty of predefined styles and option to create custom ones. +@item Support for Unicode characters. +@item Supports streaming table when data is slow to retrieve. +@end itemize") + (license license:expat))) + +(define-public python-globber + (package + (name "python-globber") + (version "0.2.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/asharov/globber") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "055xf7ja7zjhxis0ab5fnfsx16fsvr5fvc6mixqybanwxh8sgfjk")))) + (build-system python-build-system) + (home-page "https://github.com/asharov/globber") + (synopsis "Library for string matching with glob patterns") + (description + "Globber is a Python library for matching file names against glob patterns. +In contrast to other glob-matching libraries, it matches arbitrary strings and +doesn't require the matched names to be existing files. In addition, it +supports the globstar @code{**} operator to match an arbitrary number of +path components.") + (license license:asl2.0))) + +(define-public python-git-hammer + (package + (name "python-git-hammer") + (version "0.3.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/asharov/git-hammer") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0f9xlk86ijzpdj25hr1q4wcy8k72v3w470ngwm9mpdkfj8ng84wr")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-setup.py + (lambda _ + (substitute* "setup.py" + (("setup\\(") + "setup(\n test_suite=\"test\","))))))) + (propagated-inputs + `(("python-beautifultable" ,python-beautifultable) + ("python-dateutil" ,python-dateutil) + ("python-gitpython" ,python-gitpython) + ("python-globber" ,python-globber) + ("python-matplotlib" ,python-matplotlib) + ("python-sqlalchemy" ,python-sqlalchemy) + ("python-sqlalchemy-utils" + ,python-sqlalchemy-utils))) + (home-page "https://github.com/asharov/git-hammer") + (synopsis "Provide statistics for git repositories") + (description + "Git Hammer is a statistics tool for projects in git repositories. +Its major feature is tracking the number of lines authored by each person for every +commit, but it also includes some other useful statistics.") + (license license:asl2.0))) + (define-public python-fusepy (package (name "python-fusepy") @@ -18543,79 +19073,37 @@ validation testing and application logic.") (define-public python-numba (package (name "python-numba") - (version "0.46.0") + (version "0.51.2") (source (origin (method url-fetch) (uri (pypi-uri "numba" version)) (sha256 (base32 - "1vnfzcq6fcnkmdms6114d49awvvj5181fl7z1wlha27qc2paxjy2")))) + "0s0777m8kq4l96i88zj78np7283v1n4878qfc1gvzb8l45bmkg8n")))) (build-system python-build-system) (arguments - `(#:modules ((guix build utils) - (guix build python-build-system) - (ice-9 ftw) - (srfi srfi-1) - (srfi srfi-26)) - #:phases + `(#:phases (modify-phases %standard-phases (add-after 'unpack 'disable-proprietary-features (lambda _ (setenv "NUMBA_DISABLE_HSA" "1") (setenv "NUMBA_DISABLE_CUDA" "1") #t)) - (add-after 'unpack 'remove-failing-tests - (lambda _ - ;; FIXME: These tests fail for unknown reasons: - ;; test_non_writable_pycache, test_non_creatable_pycache, and - ;; test_frozen (all in numba.tests.test_dispatcher.TestCache). - (substitute* "numba/tests/test_dispatcher.py" - (("def test(_non_writable_pycache)" _ m) - (string-append "def guix_skip" m)) - (("def test(_non_creatable_pycache)" _ m) - (string-append "def guix_skip" m)) - (("def test(_frozen)" _ m) - (string-append "def guix_skip" m))) - - ;; These tests fail because we don't run the tests from the build - ;; directory: test_setup_py_distutils, test_setup_py_setuptools - ;; They are in numba.tests.test_pycc.TestDistutilsSupport. - (substitute* "numba/tests/test_pycc.py" - (("def test(_setup_py_distutils|_setup_py_setuptools)" _ m) - (string-append "def guix_skip" m))) - - ;; These tests fail because our version of Python does not have - ;; a recognizable front-end for the Numba distribution to use - ;; to check against. - (substitute* "numba/tests/test_entrypoints.py" - (("def test(_init_entrypoint)" _ m) - (string-append "def guix_skip" m))) - (substitute* "numba/tests/test_jitclasses.py" - (("def test(_jitclass_longlabel_not_truncated)" _ m) - (string-append "def guix_skip" m))) - #t)) (replace 'check - (lambda _ - (let ((cwd (getcwd))) - (setenv "PYTHONPATH" - (string-append cwd "/build/" - (find (cut string-prefix? "lib" <>) - (scandir (string-append cwd "/build"))) - ":" - (getenv "PYTHONPATH"))) - ;; Something is wrong with the PYTHONPATH when running the - ;; tests from the build directory, as it complains about not being - ;; able to import certain modules. - (with-directory-excursion "/tmp" - (invoke "python3" "-m" "numba.runtests" "-v" "-m"))) - #t))))) + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + ;; Something is wrong with the PYTHONPATH when running the + ;; tests from the build directory, as it complains about not being + ;; able to import certain modules. + (with-directory-excursion "/tmp" + (setenv "HOME" (getcwd)) + (invoke "python3" "-m" "numba.runtests" "-v" "-m"))))))) (propagated-inputs `(("python-llvmlite" ,python-llvmlite) ("python-numpy" ,python-numpy) ("python-singledispatch" ,python-singledispatch))) - ;; Needed for tests. - (inputs + (native-inputs ;for tests `(("python-jinja2" ,python-jinja2) ("python-pygments" ,python-pygments))) (home-page "https://numba.pydata.org") @@ -20131,14 +20619,14 @@ register custom encoders and decoders.") (define-public python-ujson (package (name "python-ujson") - (version "2.0.3") + (version "4.0.1") (source (origin (method url-fetch) (uri (pypi-uri "ujson" version)) (sha256 (base32 - "18z9gb9ggy1r464b9q1gqs078mqgrkj6dys5a47529rqk3yfybdx")) + "1lr9lbm76y3ah1463jggwg2hjcb709mpns5f752wxxbgnd0n5kr6")) (modules '((guix build utils))) (snippet '(begin (delete-file-recursively "deps") #t)))) @@ -20172,28 +20660,6 @@ register custom encoders and decoders.") bindings for Python 3.") (license license:bsd-3))) -(define-public python-ujson-1 - (package - (inherit python-ujson) - (version "1.35") - (source - (origin - (method url-fetch) - (uri (pypi-uri "ujson" version)) - (sha256 - (base32 - "11jz5wi7mbgqcsz52iqhpyykiaasila4lq8cmc2d54bfa3jp6q7n")))) - (arguments - '(#:phases %standard-phases)) - (native-inputs '()) - (home-page "http://www.esn.me") - (description - "UltraJSON is an ultra fast JSON encoder and decoder written in pure C with -bindings for Python 2.5+ and 3."))) - -(define-public python2-ujson-1 - (package-with-python2 python-ujson-1)) - (define-public python-iocapture ;; The latest release is more than a year older than this commit. (let ((commit "fdc021c431d0840303908dfc3ca8769db383595c") @@ -21289,13 +21755,13 @@ information for your operating system.") (define-public python-canonicaljson (package (name "python-canonicaljson") - (version "1.1.4") + (version "1.4.0") (source (origin (method url-fetch) (uri (pypi-uri "canonicaljson" version)) (sha256 - (base32 "09cpacc8yvcc74i63pdmlfaahh77dnvbyw9zf29wml2zzwqfbg25")))) + (base32 "0c86g0vvzdcg3nrcsqnbzlfhpprc2i894p8i14hska56yl27d6w9")))) (build-system python-build-system) (propagated-inputs `(("python-six" ,python-six) @@ -21717,13 +22183,13 @@ dictionaries.") (define-public pyzo (package (name "pyzo") - (version "4.10.2") + (version "4.11.2") (source (origin (method url-fetch) (uri (pypi-uri "pyzo" version)) (sha256 - (base32 "1zplxcb78qy8qibifmnsx5i9gnlfmw9n6nr4yflsabpxw57mx4m1")))) + (base32 "1jk5f79lj09vnsdk9h01w21p9h49z2hhf8xhkx8471pjbg9vrlzr")))) (build-system python-build-system) (arguments `(#:phases @@ -21733,8 +22199,8 @@ dictionaries.") ;; Tests fail with "Permission denied: '/homeless-shelter'". (setenv "HOME" "/tmp") #t))) - ;; Tests fail with "Uncaught Python exception: invalid literal for - ;; int() with base 10: 'test'". + ;; Tests fail with "Uncaught Python exception: python: undefined + ;; symbol: objc_getClass". #:tests? #f)) (propagated-inputs `(("python-pyqt" ,python-pyqt))) @@ -21886,7 +22352,7 @@ allows you, from Python code, to “fix” invalid (X)HTML markup.") (build-system python-build-system) (home-page "https://github.com/mattgiles/mujson") (synopsis "Use the fastest JSON functions available at import time") - (description "This packages selects the fastest JSON functions available + (description "This package selects the fastest JSON functions available at import time.") (license license:expat))) @@ -22223,8 +22689,6 @@ It adds a simple and readable way to print stuff during development.") (base32 "1ypbyqxlk7n6zibk90js3ybz37xmin3kk0i35g8c51bwqpcfyxg8")))) (build-system python-build-system) - (inputs - `(("tzdata" ,tzdata))) (propagated-inputs `(("python-dateutil" ,python-dateutil) ("python-pytz" ,python-pytz) @@ -22233,7 +22697,8 @@ It adds a simple and readable way to print stuff during development.") ("python-tzlocal" ,python-tzlocal))) (native-inputs `(("python-mock" ,python-mock) - ("python-parameterized" ,python-parameterized))) + ("python-parameterized" ,python-parameterized) + ("tzdata" ,tzdata-for-tests))) (arguments `(;; TODO: Of 23320 tests, 6 fail and 53 error. #:tests? #f @@ -22414,6 +22879,41 @@ a Python library to convert RELAX NG schemata in Compact syntax (rnc) to equivalent schemata in the XML-based default RELAX NG syntax.") (license license:expat))) +(define-public python-telethon + (package + (name "python-telethon") + (version "1.17.5") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/LonamiWebs/Telethon") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0l9fhdrq576vllgi9aam45xzw5xi6jhgdv5zz8i4ygssdp7cm8jl")))) + (build-system python-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "py.test" "-v")) + #t))))) + (propagated-inputs + `(("python-rsa" ,python-rsa) + ("python-pyaes" ,python-pyaes))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-pytest-asyncio" ,python-pytest-asyncio) + ("python-pytest-trio" ,python-pytest-trio))) + (home-page "https://docs.telethon.dev") + (synopsis "Full-featured Telegram client library for Python 3") + (description "This library is designed to make it easy to write Python +programs that can interact with Telegram.") + (license license:expat))) + (define-public python-citeproc-py (package (name "python-citeproc-py") @@ -22495,3 +22995,124 @@ NestedText is both simple and natural. Only a small number of concepts and rule be kept in mind when creating it. It is easily created, modified, or viewed with a text editor and easily understood and used by both programmers and non-programmers.") (license license:expat))) ; MIT license + +(define-public python-parallel + (package + (name "python-parallel") + (version "1.6.4.4") + (source + (origin + (method url-fetch) + (uri (string-append + "https://www.parallelpython.com/downloads/pp/pp-" + version ".zip")) + (sha256 + (base32 + "1mzk4yabxj6r149fswhis18hd8dnag5sj8i4wb06450zq3pi8dh7")))) + (native-inputs + `(("unzip" ,unzip))) + (build-system python-build-system) + (arguments '(#:tests? #f)) ; No test suite. + (home-page "https://www.parallelpython.com") + (synopsis "Parallel and distributed programming for Python") + (description "Parallel Python module (PP) provides an easy and efficient +way to create parallel-enabled applications for SMP computers and clusters. +PP module features cross-platform portability and dynamic load balancing. +Thus applications written with PP will parallelize efficiently even on +heterogeneous and multi-platform clusters (including clusters running other +applications with variable CPU loads).") + (license license:bsd-3))) + +(define-public python2-parallel + (package-with-python2 python-parallel)) + +(define-public python-djvulibre + (package + (name "python-djvulibre") + (version "0.8.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-djvulibre" version)) + (sha256 + (base32 "1c0lvpg7j2525cv52s3q5sg7hfnakkb8rmghg0jc02gshsxmrj4f")))) + (build-system python-build-system) + (native-inputs + `(("ghostscript" ,ghostscript) + ("pkg-config" ,pkg-config) + ("python-nose" ,python-nose))) + (inputs + `(("djvulibre" ,djvulibre) + ("python-cython" ,python-cython))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-tests + (lambda _ + ;; Unit tests try to load the 'dllpath.py' and fail, because it + ;; doesn't make sense on GNU/Linux. + (delete-file "djvu/dllpath.py") + #t))))) + (synopsis "Python bindings for DjVuLibre") + (description "This is a set of Python bindings for the DjVuLibre library.") + (home-page "https://jwilk.net/software/python-djvulibre") + (license license:gpl2))) + +(define-public python2-djvulibre + (package-with-python2 python-djvulibre)) + +(define-public python-versioneer + (package + (name "python-versioneer") + (version "0.19") + (source + (origin + (method url-fetch) + (uri (pypi-uri "versioneer" version)) + (sha256 + (base32 + "1bmg8y78am371rd9b4clf11b8g1h7xvq8q58z03jvgdwpsdx7zm4")))) + (build-system python-build-system) + (home-page + "https://github.com/python-versioneer/python-versioneer") + (synopsis + "Version-string management for VCS-controlled trees") + (description + "@code{versioneer} is a tool for managing a recorded version number in +distutils-based python projects. The goal is to remove the tedious and +error-prone \"update the embedded version string\" step from your release +process.") + (license license:public-domain))) + +(define-public python2-gamera + (package + (name "python2-gamera") + (version "3.4.4") + (source + (origin + (method url-fetch) + (uri (string-append "https://gamera.informatik.hsnr.de/download/" + "gamera-" version ".tar.gz")) + (sha256 + (base32 "1g4y1kxk1hmxfsiz682hbxvwryqilnb21ci509m559yp7hcliiyy")) + (modules '((guix build utils))) + (snippet + '(begin + ;; Remove bundled libraries. + (for-each delete-file-recursively + '("src/libpng-1.2.5" + "src/libtiff" + "src/zlib-1.2.8")))))) + (build-system python-build-system) + (inputs + `(("libpng" ,libpng) + ("libtiff" ,libtiff) + ("python2-wxpython" ,python2-wxpython) + ("zlib" ,zlib))) + (arguments + `(#:python ,python-2)) + (synopsis "Framework for building document analysis applications") + (description + "Gamera is a toolkit for building document image recognition systems.") + (home-page "https://gamera.informatik.hsnr.de/") + (license license:gpl2+))) |