diff options
Diffstat (limited to 'gnu/packages/python.scm')
| -rw-r--r-- | gnu/packages/python.scm | 737 |
1 files changed, 584 insertions, 153 deletions
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index 9388534c98..bfd003ba3e 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -11,7 +11,7 @@ ;;; Copyright © 2015, 2016 Christopher Allan Webber <cwebber@dustycloud.org> ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr> ;;; Copyright © 2015, 2016 David Thompson <davet@gnu.org> -;;; Copyright © 2015, 2016 Leo Famulari <leo@famulari.name> +;;; Copyright © 2015, 2016, 2017 Leo Famulari <leo@famulari.name> ;;; Copyright © 2015 Ben Woodcroft <donttrustben@gmail.com> ;;; Copyright © 2015, 2016 Erik Edrosa <erik.edrosa@gmail.com> ;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il> @@ -32,7 +32,8 @@ ;;; Copyright © 2016 Alex Vong <alexvong1995@gmail.com> ;;; Copyright © 2016 Arun Isaac <arunisaac@systemreboot.net> ;;; Copyright © 2016 Julien Lepiller <julien@lepiller.eu> -;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2016, 2017 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2016 Thomas Danckaert <post@thomasdanckaert.be> ;;; ;;; This file is part of GNU Guix. ;;; @@ -651,14 +652,14 @@ on localhost.") (define-public python-pytz (package (name "python-pytz") - (version "2016.3") + (version "2016.10") (source (origin (method url-fetch) (uri (pypi-uri "pytz" version ".tar.bz2")) (sha256 (base32 - "1mjmrkk4vc5xzppw7fm0pli1nnbj57cvqv7jjv5whcmccyhxz4y1")))) + "0az099cyp6p5xbsvfcdacj4hvxncbwm2ayn3h55mcp07zb2b45kh")))) (build-system python-build-system) (arguments `(#:tests? #f)) ; no test target (home-page "http://pythonhosted.org/pytz") @@ -675,14 +676,14 @@ using Python 2.4 or higher and provides access to the Olson timezone database.") (define-public python-babel (package (name "python-babel") - (version "2.3.2") + (version "2.3.4") (source (origin (method url-fetch) (uri (pypi-uri "Babel" version)) (sha256 (base32 - "0k43pi0p1dwpds2w0km3fw92wixzxv2vw7p09capxmjz5cfh23lw")))) + "0x98qqqw35xllpcama013a9788ly84z8dm1w2wwfpxh2710c8df5")))) (build-system python-build-system) (propagated-inputs `(("python-pytz" ,python-pytz))) @@ -728,6 +729,51 @@ certificate returned by the server to which a connection has been established, and verifies that it matches the intended target hostname.") (license license:psfl))) +(define-public python-hdf4 + (package + (name "python-hdf4") + (version "0.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri name version)) + (sha256 + (base32 + "1hjiyrxvxk9817qyqky3nar4y3fs4z8wxz0n884zzb5wi6skrjks")))) + (build-system python-build-system) + (native-inputs `(("nose" ,python-nose))) + (propagated-inputs `(("numpy" ,python-numpy))) + (inputs + `(("hdf4" ,hdf4) + ("libjpeg" ,libjpeg) + ("zlib" ,zlib))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + ;; The 'runexamples' script sets PYTHONPATH to CWD, then goes + ;; on to import numpy. Somehow this works on their CI system. + ;; Let's just manage PYTHONPATH here instead. + (substitute* "runexamples.sh" + (("export PYTHONPATH=.*") "")) + (setenv "PYTHONPATH" + (string-append (getcwd) ":" + (getenv "PYTHONPATH"))) + (and (zero? (system* "./runexamples.sh")) + (zero? (system* "nosetests" "-v")))))))) + (home-page "https://github.com/fhs/python-hdf4") + (synopsis "Python interface to the NCSA HDF4 library") + (description + "Python-HDF4 is a python wrapper around the NCSA HDF version 4 library, +which implements the SD (Scientific Dataset), VS (Vdata) and V (Vgroup) API’s. +NetCDF files can also be read and modified. Python-HDF4 is a fork of +@url{http://hdfeos.org/software/pyhdf.php,pyhdf}.") + (license license:expat))) + +(define-public python2-hdf4 + (package-with-python2 python-hdf4)) + (define-public python-h5py (package (name "python-h5py") @@ -777,6 +823,57 @@ concepts.") (define-public python2-h5py (package-with-python2 python-h5py)) +(define-public python-netcdf4 + (package + (name "python-netcdf4") + (version "1.2.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "netCDF4" version)) + (sha256 + (base32 + "1qcymsfxsdfr4sx0vl7ih5d14z66k6c9sjy4gb6rjaksk5387zvg")))) + (build-system python-build-system) + (native-inputs + `(("python-cython" ,python-cython))) + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (inputs + `(("netcdf" ,netcdf) + ("hdf4" ,hdf4) + ("hdf5" ,hdf5))) + (arguments + '(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ + (setenv "NO_NET" "1") ; disable opendap tests + (with-directory-excursion "test" + (setenv "PYTHONPATH" ; find and add the library we just built + (string-append + (car (find-files "../build" "lib.*" + #:directories? #:t + #:fail-on-error? #:t)) + ":" (getenv "PYTHONPATH"))) + (zero? (system* "python" "run_all.py")))))))) + (home-page + "https://github.com/Unidata/netcdf4-python") + (synopsis "Python/numpy interface to the netCDF library") + (description "Netcdf4-python is a Python interface to the netCDF C +library. netCDF version 4 has many features not found in earlier +versions of the library and is implemented on top of HDF5. This module +can read and write files in both the new netCDF 4 and the old netCDF 3 +format, and can create files that are readable by HDF5 clients. The +API is modelled after @code{Scientific.IO.NetCDF}, and should be familiar +to users of that module.") + ;; The software is mainly ISC, but includes some files covered + ;; by the Expat license. + (license (list license:isc license:expat)))) + +(define-public python2-netcdf4 + (package-with-python2 python-netcdf4)) + (define-public python-lockfile (package (name "python-lockfile") @@ -810,14 +907,13 @@ API for locking files.") (source (origin (method url-fetch) - (uri (string-append "https://pypi.python.org/packages/source/m/mock/" - "mock-" version ".tar.gz")) + (uri (pypi-uri "mock" version)) (sha256 (base32 "0kzlsbki6q0awf89rc287f3aj8x431lrajf160a70z0ikhnxsfdq")))) (build-system python-build-system) (arguments '(#:test-target "check")) - (home-page "http://code.google.com/p/mock/") + (home-page "https://github.com/testing-cabal/mock") (synopsis "Python mocking and patching library for testing") (description "Mock is a library for testing in Python. It allows you to replace parts @@ -875,7 +971,11 @@ Python 3 support.") (define-public python2-setuptools (package-with-python2 python-setuptools)) - +;;; Pycrypto is abandoned upstream: +;;; +;;; https://github.com/dlitz/pycrypto/issues/173 +;;; +;;; TODO Remove this package from GNU Guix. (define-public python-pycrypto (package (name "python-pycrypto") @@ -883,8 +983,8 @@ Python 3 support.") (source (origin (method url-fetch) - (uri (string-append "https://pypi.python.org/packages/source/p/" - "pycrypto/pycrypto-" version ".tar.gz")) + (uri (pypi-uri "pycrypto" version)) + (patches (search-patches "python-pycrypto-CVE-2013-7459.patch")) (sha256 (base32 "0g0ayql5b9mkjam8hym6zyg6bv77lbh66rv1fyvgqb17kfc1xkpj")))) @@ -1176,15 +1276,14 @@ Python 3.3+.") (define-public python-pyicu (package (name "python-pyicu") - (version "1.9.2") + (version "1.9.5") (source (origin (method url-fetch) - (uri (string-append "https://pypi.python.org/packages/source/P/PyICU/PyICU-" - version ".tar.gz")) + (uri (pypi-uri "PyICU" version)) (sha256 (base32 - "1diba0g8md614fvm9yf50paiwdkhj6rd7xwf1rg9mc0pxc0hhn4v")))) + "16rmxy9y0qhqqna2v49i7nzwm09as699rbyvh4raw7w602w55c3k")))) (build-system python-build-system) (inputs `(("icu4c" ,icu4c))) @@ -2292,14 +2391,14 @@ is used by the Requests library to verify HTTPS requests.") (define-public python-click (package (name "python-click") - (version "6.6") + (version "6.7") (source (origin (method url-fetch) (uri (pypi-uri "click" version)) (sha256 (base32 - "1sggipyz52crrybwbr9xvwxd4aqigvplf53k9w3ygxmzivd1jsnc")))) + "02qkfpykbq35id8glfgwc38yc430427yd05z1wc5cnld8zgicmgi")))) (build-system python-build-system) (arguments `(#:phases @@ -2462,6 +2561,34 @@ version numbers.") (propagated-inputs `(("python2-functools32" ,python2-functools32)))))) +(define-public python-kitchen + (package + (name "python-kitchen") + (version "1.2.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "kitchen" version)) + (sha256 + (base32 + "0ggv3p4x8jvmmzhp0xm00h6pvh1g0gmycw71rjwagnrj8n23vxrq")))) + (build-system python-build-system) + (propagated-inputs + `(("python-chardet" ,python-chardet))) + (home-page "https://fedorahosted.org/kitchen") + (synopsis "Python API for snippets") + (description "@code{kitchen} module provides a python API for all sorts of +little useful snippets of code that everybody ends up writing for their projects +but never seem big enough to build an independent release. Use kitchen and stop +cutting and pasting that code over and over.") + (license (list license:lgpl2.1+ + ;; subprocess.py, test_subprocess.py, + ;; kitchen/pycompat25/defaultdict.py: + license:psfl)))) + +(define-public python2-kitchen + (package-with-python2 python-kitchen)) + (define-public python-unidecode (package (name "python-unidecode") @@ -2570,16 +2697,14 @@ environments and back.") (define-public python-pyyaml (package (name "python-pyyaml") - (version "3.11") + (version "3.12") (source (origin (method url-fetch) - (uri (string-append - "https://pypi.python.org/packages/source/P/PyYAML/PyYAML-" - version ".tar.gz")) + (uri (pypi-uri "PyYAML" version)) (sha256 (base32 - "1s26125vfnskng58ym37xhwv8v0mm95b2cwbjfag8prfhy596v63")))) + "1aqjl8dk9amd4zr99n8v2qxzgmr2hdvqfma4zh7a41rj6336c9sr")))) (build-system python-build-system) (inputs `(("libyaml" ,libyaml))) @@ -2769,16 +2894,14 @@ logging and tracing of the execution.") (define-public python-docutils (package (name "python-docutils") - (version "0.12") + (version "0.13.1") (source (origin (method url-fetch) - (uri (string-append - "https://pypi.python.org/packages/source/d/docutils/docutils-" - version ".tar.gz")) + (uri (pypi-uri "docutils" version)) (sha256 (base32 - "1ylnjnw1x4b2y7blr6x35ncdzn69k253kw4cdkv6asdb21w73ny7")))) + "1gkma47i609jfs7dssxn4y9vsz06qi0l5q41nws0zgkpnrghz33i")))) (build-system python-build-system) (arguments '(#:tests? #f)) ; no setup.py test command @@ -2798,14 +2921,14 @@ reStructuredText.") (define-public python-pygments (package (name "python-pygments") - (version "2.0.2") + (version "2.1.3") (source (origin (method url-fetch) (uri (pypi-uri "Pygments" version)) (sha256 (base32 - "0lagrwifsgn0s8bzqahpr87p7gd38xja8f06akscinp6hj89283k")))) + "10axnp2wpjnq9g8wg53fx0c70dfxqrz498jyz8mrdx9a3flwir48")))) (build-system python-build-system) (arguments ;; FIXME: Tests require sphinx, which depends on this. @@ -3008,7 +3131,7 @@ and is very extensible.") (define-public python-scikit-learn (package (name "python-scikit-learn") - (version "0.16.1") + (version "0.18.1") (source (origin (method url-fetch) @@ -3018,7 +3141,7 @@ and is very extensible.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "140skabifgc7lvvj873pnzlwx0ni6q8qkrsyad2ccjb3h8rxzkih")))) + "1hwswckdmd27f7k1jvwdc0m4mqrgxl2s245yq1scq34v124bjqgq")))) (build-system python-build-system) (arguments `(#:phases @@ -3026,21 +3149,12 @@ and is very extensible.") 'check 'set-HOME ;; some tests require access to "$HOME" (lambda _ (setenv "HOME" "/tmp")) - ;; Tests can only be run after the library has been installed and not - ;; within the source directory. - (alist-cons-after - 'install 'check - (lambda _ - (with-directory-excursion "/tmp" - ;; With Python 3 one test of 3334 fails - ;; (sklearn.tests.test_common.test_transformers); see - ;; https://github.com/scikit-learn/scikit-learn/issues/3693 - (system* "nosetests" "-v" "sklearn"))) - (alist-delete 'check %standard-phases))))) + %standard-phases))) (inputs `(("openblas" ,openblas))) (native-inputs - `(("python-nose" ,python-nose))) + `(("python-nose" ,python-nose) + ("python-cython" ,python-cython))) (propagated-inputs `(("python-numpy" ,python-numpy) ("python-scipy" ,python-scipy))) @@ -3276,17 +3390,38 @@ capabilities.") (define python2-numpy-bootstrap (package-with-python2 python-numpy-bootstrap)) +(define-public python-munch + (package + (name "python-munch") + (version "2.0.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "munch" version)) + (sha256 + (base32 + "1cmqg91xnqx8gvnh4pmp0bfl1dfcm65d5p9mg73zz8pkjhx6h80l")))) + (build-system python-build-system) + (home-page "https://github.com/Infinidat/munch") + (synopsis "Dot-accessible dictionary") + (description "Munch is a dot-accessible dictionary similar to JavaScript +objects.") + (license license:expat))) + +(define-public python2-munch + (package-with-python2 python-munch)) + (define-public python2-fastlmm (package (name "python2-fastlmm") - (version "0.2.21") + (version "0.2.26") (source (origin (method url-fetch) (uri (pypi-uri "fastlmm" version ".zip")) (sha256 (base32 - "1q8c34rpmwkfy3r4d5172pzdkpfryj561897z9r3x22gq7813x1m")))) + "0yxrx9xzai4fyrsi7c2p31kxvpq9czmv1p0wax5ic07m6izbszxg")))) (build-system python-build-system) (arguments `(#:python ,python-2)) ; only Python 2.7 is supported @@ -3374,6 +3509,33 @@ association studies (GWAS) on extremely large data sets.") (define-public python2-numpy (package-with-python2 python-numpy)) +(define-public python-pygit2 + (package + (name "python-pygit2") + (version "0.25.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pygit2" version)) + (sha256 + (base32 + "0wf5rp0fvrw7j3j18dvwjq6xqlbm611wd55aphrfpps0v1gxh3ny")))) + (build-system python-build-system) + (propagated-inputs + `(("python-six" ,python-six) + ("python-cffi" ,python-cffi) + ("libgit2" ,libgit2) + ("python-tox" ,python-tox))) + (home-page "https://github.com/libgit2/pygit2") + (synopsis "Python bindings for libgit2") + (description "Pygit2 is a set of Python bindings to the libgit2 shared +library, libgit2 implements Git plumbing.") + ;; GPL2.0 only, with linking exception. + (license license:gpl2))) + +(define-public python2-pygit2 + (package-with-python2 python-pygit2)) + (define-public python-pyparsing (package (name "python-pyparsing") @@ -3462,14 +3624,14 @@ that client code uses to construct the grammar directly in Python code.") (define-public python-numexpr (package (name "python-numexpr") - (version "2.6.0") + (version "2.6.1") (source (origin (method url-fetch) (uri (pypi-uri "numexpr" version)) (sha256 (base32 - "0i6iagl2hhbr8q4qzbbjd859v5806vqylq87fq7pi914ps6d6cag")))) + "01lsja72m32z0i5p8rwxbfyzk4mplh72k2a140nwh8vv4wpyfbnv")))) (build-system python-build-system) (arguments `(#:tests? #f)) ; no tests included (propagated-inputs @@ -4172,38 +4334,36 @@ a general image processing tool.") (define-public python-pycparser (package (name "python-pycparser") - (version "2.14") + (version "2.17") (source (origin (method url-fetch) (uri (pypi-uri "pycparser" version)) (sha256 (base32 - "0wvzyb6rxsfj3xcnpa4ynbh9qc7rrbk2277d5wqpphmx9akv8nbr")))) + "1dkkjri0miidqb1zcqhqljfa34fcy9k5akasgwsv6k622zlk3b0a")))) (outputs '("out" "doc")) (build-system python-build-system) (native-inputs `(("pkg-config" ,pkg-config))) (arguments `(#:phases - (alist-replace - 'check - (lambda _ - (with-directory-excursion "tests" - (zero? (system* "python" "all_tests.py")))) - (alist-cons-after - 'install 'install-doc - (lambda* (#:key outputs #:allow-other-keys) - (let* ((data (string-append (assoc-ref outputs "doc") "/share")) - (doc (string-append data "/doc/" ,name "-" ,version)) - (examples (string-append doc "/examples"))) - (mkdir-p examples) - (for-each (lambda (file) - (copy-file (string-append "." file) - (string-append doc file))) - '("/README.rst" "/CHANGES" "/LICENSE")) - (copy-recursively "examples" examples))) - %standard-phases)))) + (modify-phases %standard-phases + (replace 'check + (lambda _ + (with-directory-excursion "tests" + (zero? (system* "python" "all_tests.py"))))) + (add-after 'install 'install-doc + (lambda* (#:key outputs #:allow-other-keys) + (let* ((data (string-append (assoc-ref outputs "doc") "/share")) + (doc (string-append data "/doc/" ,name "-" ,version)) + (examples (string-append doc "/examples"))) + (mkdir-p examples) + (for-each (lambda (file) + (copy-file (string-append "." file) + (string-append doc file))) + '("/README.rst" "/CHANGES" "/LICENSE")) + (copy-recursively "examples" examples))))))) (home-page "https://github.com/eliben/pycparser") (synopsis "C parser in Python") (description @@ -4361,13 +4521,13 @@ PNG, PostScript, PDF, and SVG file output.") (define-public python-decorator (package (name "python-decorator") - (version "4.0.9") + (version "4.0.10") (source (origin (method url-fetch) (uri (pypi-uri "decorator" version)) (sha256 - (base32 "1a5vwhflfd9sh3rfb40xlyipldgdzfff6brman57hqv3661jw0lh")))) + (base32 "0w7hg59hlpq74jpyja4yfryap0ccjvchgpkfp20rhj9krgnrhvlw")))) (build-system python-build-system) (arguments '(#:tests? #f)) ; no test target (home-page "https://pypi.python.org/pypi/decorator/") @@ -4687,14 +4847,14 @@ without using the configuration machinery.") (define-public python-jupyter-core (package (name "python-jupyter-core") - (version "4.2.0") + (version "4.2.1") (source (origin (method url-fetch) (uri (string-append (pypi-uri "jupyter_core" version))) (sha256 (base32 - "177d9csqldzhsh6xs1p4nf6lzvhzyg6gklqjf69lxgxyadx87v24")))) + "1cy7inv218dgh4m1fbzbsiqpz733ylgjrj62jxqpfzs3r2cm7ic9")))) (build-system python-build-system) ;; FIXME: not sure how to run the tests (arguments `(#:tests? #f)) @@ -4744,13 +4904,13 @@ installing @code{kernelspec}s for use with Jupyter frontends.") (define-public python-ipykernel (package (name "python-ipykernel") - (version "4.5.0") + (version "4.5.2") (source (origin (method url-fetch) (uri (pypi-uri "ipykernel" version)) (sha256 - (base32 "15c2bp1x3i6s4xb7vz7742h3kmvdfdfn9n2haywm3mwgvf77jni4")))) + (base32 "0qllv0k6zzv1r1cj1x2ygxmlrrqhbslzj8rc6r6fg3kc1rgz4m2s")))) (build-system python-build-system) ;; The tests load a submodule of IPython. However, IPython itself depends ;; on ipykernel. @@ -5065,6 +5225,27 @@ features useful for text console applications.") (define-public python2-urwid (package-with-python2 python-urwid)) +(define-public python2-openid + (package + (name "python2-openid") + (version "2.2.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-openid" version)) + (sha256 + (base32 + "1vvhxlghjan01snfdc4k7ykd80vkyjgizwgg9bncnin8rqz1ricj")))) + (build-system python-build-system) + (arguments + ;; Python 3 support is in `python3-openid`, a separate package. + `(#:python ,python-2)) + (home-page "https://github.com/openid/python-openid") + (synopsis "OpenID support for servers and consumers") + (description "This library provides OpenID authentication for Python, both +for clients and servers.") + (license license:asl2.0))) + (define-public python-urwidtrees (package (name "python-urwidtrees") @@ -5298,6 +5479,49 @@ another XPath engine to find the matching elements in an XML or HTML document.") (define-public python2-cssselect (package-with-python2 python-cssselect)) +(define-public python-openid-cla + (package + (name "python-openid-cla") + (version "1.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-openid-cla" version)) + (sha256 + (base32 + "102hy2qisvjxp5s0v9lvwqi4f2dk0dhns40vjgn008yxc7k0h3cr")))) + (build-system python-build-system) + (home-page "https://github.com/puiterwijk/python-openid-cla/") + (synopsis "Implementation of the OpenID CLA extension for python-openid") + (description "@code{openid-cla} is an implementation of the OpenID +contributor license agreement extension for python-openid.") + (license license:bsd-3))) + +(define-public python2-openid-cla + (package-with-python2 python-openid-cla)) + +(define-public python-openid-teams + (package + (name "python-openid-teams") + (version "1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-openid-teams" version)) + (sha256 + (base32 + "05zrh78alav24rxkbqlpbad6d3x2nljk6z6j7kflxf3vdqa7w969")))) + (build-system python-build-system) + (home-page "https://github.com/puiterwijk/python-openid-teams/") + (synopsis "Implementation of the OpenID teams extension for python-openid") + (description + "@code{openid-teams} is an implementation of the OpenID +teams extension for python-openid.") + (license license:bsd-3))) + +(define-public python2-openid-teams + (package-with-python2 python-openid-teams)) + (define-public python-netifaces (package (name "python-netifaces") @@ -5608,14 +5832,14 @@ connection to each user.") (define-public python-backports-abc (package (name "python-backports-abc") - (version "0.4") + (version "0.5") (source (origin (method url-fetch) (uri (pypi-uri "backports_abc" version)) (sha256 (base32 - "19fh75lni9pb673n2fn505m1rckm0af0szcv5xx1qm1xpa940glb")))) + "1pkv8d1zxj5f9i227dxbjczncbv7ks7ywnjwyxfjagm02i2yafq3")))) (build-system python-build-system) (home-page "https://github.com/cython/backports_abc") (synopsis "Backport of additions to the 'collections.abc' module") @@ -5920,14 +6144,14 @@ Python.") (define-public python-markdown (package (name "python-markdown") - (version "2.6.5") + (version "2.6.7") (source (origin (method url-fetch) (uri (pypi-uri "Markdown" version)) (sha256 (base32 - "0q758a3fiiawr20b3hhjfs677cwj6xi284yb7xspcvv0fdicz54d")))) + "1h055llfd0ps0ig7qb3v1j9068xv90dc9s7xkhkgz9zg8r4g5sys")))) (build-system python-build-system) (arguments `(#:phases @@ -6020,6 +6244,28 @@ term.js Javascript terminal emulator library.") ,python2-backport-ssl-match-hostname) ,@(package-propagated-inputs terminado)))))) +(define-public python-straight-plugin + (package + (name "python-straight-plugin") + (version "1.4.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "straight.plugin" version)) + (sha256 + (base32 + "069pjll4383p4kkgvcc40hgyvf79j2wdbpgwz77yigzxksh1gj62")))) + (build-system python-build-system) + (home-page "https://github.com/ironfroggy/straight.plugin") + (synopsis "Simple namespaced plugin facility") + (description "Straight Plugin provides a type of plugin you can create from +almost any existing Python modules, and an easy way for outside developers to +add functionality and customization to your projects with their own plugins.") + (license license:expat))) + +(define-public python2-straight-plugin + (package-with-python2 python-straight-plugin)) + (define-public python-fonttools (package (name "python-fonttools") @@ -6461,7 +6707,7 @@ suitable for a wide range of protocols based on the ASN.1 specification.") (build-system python-build-system) (propagated-inputs `(("python-pyasn1" ,python-pyasn1))) - (home-page "http://sourceforge.net/projects/pyasn1/") + (home-page "https://sourceforge.net/projects/pyasn1/") (synopsis "ASN.1 codec implementations") (description "Pyasn1-modules is a collection of Python modules providing ASN.1 types and @@ -6579,14 +6825,14 @@ responses, rather than doing any computation.") (define-public python-cryptography-vectors (package (name "python-cryptography-vectors") - (version "1.6") + (version "1.7.1") (source (origin (method url-fetch) (uri (pypi-uri "cryptography_vectors" version)) (sha256 (base32 - "0xgn3yvlmv5rs92wgjj39qscr6s7mwbbsx7j683sfa6ijmyb1k01")))) + "1x2mz4wggja5ih45c6cw0kzyad4jr8avg327dawjr1gnpdq1psa7")))) (build-system python-build-system) (home-page "https://github.com/pyca/cryptography") (synopsis "Test vectors for the cryptography package") @@ -6601,29 +6847,15 @@ responses, rather than doing any computation.") (define-public python-cryptography (package (name "python-cryptography") - (version "1.6") + (version "1.7.1") (source (origin (method url-fetch) (uri (pypi-uri "cryptography" version)) (sha256 (base32 - "0gwvmz6w5ml0bjbgmdiscsv5i948lrjd381z7h9qkz6kr398c3ad")))) + "0k6v7wq4h0yk9r0x0bl2x9fyrg4a6gj5qp4m9mgpk6m481yyygwm")))) (build-system python-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-before 'check 'disable-failing-test - (lambda _ - ;; This test is known to fail with OpenSSL >= 1.0.2i and older - ;; versions of python-cryptography: - ;; https://github.com/pyca/cryptography/issues/3196 - ;; TODO: Try re-enabling the test when upgrading - ;; python-cryptography. - (substitute* "tests/hazmat/backends/test_openssl.py" - (("def test_numeric_string_x509_name_entry") - "@pytest.mark.xfail\n def test_numeric_string_x509_name_entry")) - #t))))) (inputs `(("openssl" ,openssl))) (propagated-inputs @@ -6705,26 +6937,21 @@ library.") (define-public python-pip (package (name "python-pip") - (version "8.0.2") + (version "9.0.1") (source (origin (method url-fetch) (uri (pypi-uri "pip" version)) (sha256 (base32 - "08cm8d4228fj0qnrysy3qv1a6022zr3dcs25amd14lgxil6vvx26")))) + "03clr9c1dih5n9c00c592zzvf6r1ffimywkaq9agcqdllzhl7wh9")))) (build-system python-build-system) - (native-inputs - `(;; Tests - ("python-virtualenv" ,python-virtualenv) - ("python-mock" ,python-mock) - ("python-pytest" ,python-pytest) - ("python-scripttest" ,python-scripttest))) + (arguments + '(#:tests? #f)) ; there are no tests in the pypi archive. (home-page "https://pip.pypa.io/") - (synopsis - "Package manager for Python software") + (synopsis "Package manager for Python software") (description - "Pip is a package manager for Python software, that finds packages on the + "Pip is a package manager for Python software, that finds packages on the Python Package Index (PyPI).") (license license:expat))) @@ -7721,14 +7948,14 @@ timestamps.") (define-public python-werkzeug (package (name "python-werkzeug") - (version "0.11.11") + (version "0.11.15") (source (origin (method url-fetch) (uri (pypi-uri "Werkzeug" version)) (sha256 (base32 - "1rgpq8a2qv26d75v9j3b074inirlyy6y4b5x4rxblp202jy4cb77")))) + "1h5wycw8yj7q0grqsjnsqflmrlsdagvl2j4dsgdncci6mjc7fpa5")))) (build-system python-build-system) (native-inputs `(("python-pytest" ,python-pytest))) @@ -7802,15 +8029,13 @@ be set via config files and/or environment variables.") (define-public python-ndg-httpsclient (package (name "python-ndg-httpsclient") - (version "0.4.0") + (version "0.4.2") (source (origin (method url-fetch) - (uri (string-append - "https://pypi.python.org/packages/source/n/ndg-httpsclient/" - "ndg_httpsclient-" version ".tar.gz")) + (uri (pypi-uri "ndg_httpsclient" version)) (sha256 (base32 - "0x32ibixm3vv5m9xfk83xsqm8xcqw4dd0khbh6qbri6rxgymbhg8")))) + "1b5qirv46v4dpnmfqviwq42mdwfcby4dxmz0i41wad2337pqf2aq")))) (build-system python-build-system) (arguments '(;; The tests appear to require networking. @@ -7981,13 +8206,13 @@ applications.") (define-public python-click-log (package (name "python-click-log") - (version "0.1.3") + (version "0.1.8") (source (origin (method url-fetch) (uri (pypi-uri "click-log" version)) (sha256 (base32 - "0kdd1vminxpcfczxl2kkf285n0dr1gxh2cdbx1p6vkj7b7bci3gx")))) + "14ikfjfgnzf21mjniq9lfk2igzykgzfvwwrk85nw2b9fq44109sp")))) (build-system python-build-system) (propagated-inputs `(("python-click" ,python-click))) @@ -8057,6 +8282,28 @@ minimal and fast API targetting the following uses: (define-public python2-execnet (package-with-python2 python-execnet)) +(define-public python-trollius-redis + (package + (name "python-trollius-redis") + (version "0.1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "trollius_redis" version)) + (sha256 + (base32 + "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy")))) + (build-system python-build-system) + (home-page "https://github.com/benjolitz/trollius-redis") + (synopsis "Port of asyncio-redis to trollius") + (description "@code{trollius-redis} is a Redis client for Python + trollius. It is an asynchronious IO (PEP 3156) implementation of the + Redis protocol.") + (license license:bsd-2))) + +(define-public python2-trollius-redis + (package-with-python2 python-trollius-redis)) + ;;; The software provided by this package was integrated into pytest 2.8. (define-public python-pytest-cache (package @@ -8168,13 +8415,13 @@ processes across test runs.") (define-public python-icalendar (package (name "python-icalendar") - (version "3.11") + (version "3.11.1") (source (origin (method url-fetch) (uri (pypi-uri "icalendar" version)) (sha256 (base32 - "01v2f3swd5s72x65cdihw83dx1z799b4i49a6ncg7vqmcm20wapd")))) + "1bvi7rzh7scl4nmgj2n2cy7k0v3p29y15cqy2hcdnfq9mnhdr63y")))) (build-system python-build-system) (propagated-inputs `(("python-dateutil" ,python-dateutil) @@ -8646,14 +8893,14 @@ interface to the Amazon Web Services (AWS) API.") (define-public awscli (package (name "awscli") - (version "1.11.5") + (version "1.11.35") (source (origin (method url-fetch) (uri (pypi-uri name version)) (sha256 (base32 - "0lclasm0wnayd3b8zl9l91i32nbgrhh0ncf9lksss4cv0myfwmfg")))) + "0k6y8cg311bqak5x9pilg80w6f76dcbzm6xcdrw6rjnk6v4xwy70")))) (build-system python-build-system) (propagated-inputs `(("python-colorama" ,python-colorama) @@ -8729,10 +8976,10 @@ normally the case.") (define-public python2-pytest-subtesthack (package-with-python2 python-pytest-subtesthack)) -(define-public python2-xdo +(define-public python-xdo (package - (name "python2-xdo") - (version "0.2") + (name "python-xdo") + (version "0.3") (source (origin (method url-fetch) (uri (string-append @@ -8740,11 +8987,10 @@ normally the case.") "python-xdo_" version ".orig.tar.gz")) (sha256 (base32 - "1kl5c1p0dyxf62plnk6fl77ycfb4whwjms16r14dxx8kn90hlqz4")))) + "1vqh1n5yy5dhnq312kwrl90fnck4v26is3lq3lxdvcn60vv19da0")))) (build-system python-build-system) (arguments - `(#:python ,python-2 - #:tests? #f)) ; no tests provided + `(#:tests? #f)) ; no tests provided (inputs `(("xdotool" ,xdotool) ("libX11" ,libx11))) @@ -8755,6 +9001,9 @@ input. (Note that this is mostly a legacy library; you may wish to look at python-xdo for newer bindings.)") (license license:bsd-3))) +(define-public python2-xdo + (package-with-python2 python-xdo)) + (define-public python-wtforms (package (name "python-wtforms") @@ -8795,14 +9044,14 @@ available in Django, but is a standalone package.") (define-public python-mako (package (name "python-mako") - (version "1.0.3") + (version "1.0.6") (source (origin (method url-fetch) (uri (pypi-uri "Mako" version)) (sha256 (base32 - "136kcjbs0s98qkx8a418b05dfblqp0kiiqyx8vhx4rarwc7bqi3n")))) + "03dyxgjknp4ffsv7vwfd28l5bbpzi0ylp20543wpg3iahyyrwma8")))) (build-system python-build-system) (propagated-inputs `(("python-markupsafe" ,python-markupsafe))) @@ -8985,14 +9234,14 @@ layouts.") (define-public python-pyquery (package (name "python-pyquery") - (version "1.2.13") + (version "1.2.17") (source (origin (method url-fetch) (uri (pypi-uri "pyquery" version)) (sha256 (base32 - "0j9fsisip21qv4xljsg5dmni1pgpvwrjyyhhql0glydc4bs5rjgv")))) + "1xia20wm0vx5dk85kcwgh13bylz8qh47ffjxssd2586r60xi783a")))) (build-system python-build-system) (native-inputs `(("python-webob" ,python-webob) @@ -9456,6 +9705,56 @@ presume or force a developer to use a particular tool or library.") (define-public python2-flask (package-with-python2 python-flask)) +(define-public python-flask-wtf + (package + (name "python-flask-wtf") + (version "0.13.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Flask-WTF" version)) + (sha256 + (base32 + "04l5743j2dici46038sqlzvf0xzpg8rf7s9ld2x24xv7f4idg990")))) + (build-system python-build-system) + (propagated-inputs + `(("python-flask-babel" ,python-flask-babel) + ("python-babel" ,python-babel) + ("python-wtforms" ,python-wtforms))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://github.com/lepture/flask-wtf") + (synopsis "Simple integration of Flask and WTForms") + (description "Flask-WTF integrates Flask and WTForms, including CSRF, file +upload, and reCAPTCHA.") + (license license:bsd-3))) + +(define-public python2-flask-wtf + (package-with-python2 python-flask-wtf)) + +(define-public python-flask-multistatic + (package + (name "python-flask-multistatic") + (version "1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "flask-multistatic" version)) + (sha256 + (base32 + "0p4v50rwv64wcd0zlq7rzl4waprwr4hj19s3cgf1isywa7jcisgm")))) + (build-system python-build-system) + (propagated-inputs + `(("python-flask" ,python-flask))) + (home-page "https://pagure.io/flask-multistatic") + (synopsis "Flask plugin to allow overriding static files") + (description "@code{flask-multistatic} is a flask plugin that adds support +for overriding static files.") + (license license:gpl3+))) + +(define-public python2-flask-multistatic + (package-with-python2 python-flask-multistatic)) + (define-public python-cookies (package (name "python-cookies") @@ -10074,7 +10373,7 @@ different processes. This allows better error handling when running code over multiple processes (imagine multiprocessing, billiard, futures, celery etc). @item Parse traceback strings and raise with the parsed tracebacks. -@end itemize") +@end enumerate\n") (license license:bsd-3))) (define-public python2-tblib @@ -10116,13 +10415,13 @@ provides support for parsing, splitting and formatting SQL statements.") (define-public python-greenlet (package (name "python-greenlet") - (version "0.4.9") + (version "0.4.11") (source (origin (method url-fetch) (uri (pypi-uri "greenlet" version)) (sha256 (base32 - "04h0m54dyqg49vyarq26mry6kbivnpl47rnmmrk9qn8wpfxviybr")))) + "1xhik26j4f3kc4qw9xmj0c567rb5h1zryb4ijwqnqwwjvfhbv59h")))) (build-system python-build-system) (home-page "https://greenlet.readthedocs.io/") (synopsis "Lightweight in-process concurrent programming") @@ -10234,17 +10533,14 @@ network support library.") (define-public python-ply (package (name "python-ply") - (version "3.8") + (version "3.9") (source (origin (method url-fetch) - (uri (string-append - "https://pypi.python.org/packages/" - "96/e0/430fcdb6b3ef1ae534d231397bee7e9304be14a47a267e82ebcb3323d0b5" - "/ply-" version ".tar.gz")) + (uri (pypi-uri "ply" version)) (sha256 (base32 - "1f70ipynmiy09k6px2j7v4w5cdrc21za3xs2k6f1bsvb0bzvvlg7")))) + "0gpl0yli3w03ipyqfrp3w5nf0iawhsq65anf5wwm2wf5p502jzhd")))) (build-system python-build-system) (home-page "http://www.dabeaz.com/ply/") (synopsis "Python Lex & Yacc") @@ -10744,14 +11040,14 @@ implementation for Python.") (define-public python-prompt-toolkit (package (name "python-prompt-toolkit") - (version "1.0.7") + (version "1.0.9") (source (origin (method url-fetch) (uri (pypi-uri "prompt_toolkit" version ".tar.gz")) (sha256 (base32 - "1vyjd0b7wciv55i19l44zy0adx8q7ss79lhy2r9d1rwz2y4822zg")))) + "172r15k9kwdw2lnajvpz1632dd16nqz1kcal1p0lq5ywdarj6rfd")))) (build-system python-build-system) (arguments '(#:tests? #f)) ; The test suite uses some Windows-specific data types. @@ -10874,14 +11170,14 @@ provide an easy-to-use Python interface for building OAuth1 and OAuth2 clients." (define-public python-stem (package (name "python-stem") - (version "1.4.1b") + (version "1.5.3") (source (origin (method url-fetch) - (uri (pypi-uri "stem" version ".tar.bz2")) + (uri (pypi-uri "stem" version)) (sha256 (base32 - "09a3amp1y351nwz088ckiibbp666qi2lxwkyknavswfm400s0ns7")))) + "0fm67dfx6qaj0mg80r4yw2i72birpzn7cnbyz4p1857max3zfc97")))) (build-system python-build-system) (arguments `(#:phases @@ -10893,8 +11189,6 @@ provide an easy-to-use Python interface for building OAuth1 and OAuth2 clients." `(("python-mock" ,python-mock) ("python-pep8" ,python-pep8) ("python-pyflakes" ,python-pyflakes))) - (propagated-inputs - `(("python-pycrypto" ,python-pycrypto))) (home-page "https://stem.torproject.org/") (synopsis "Python controller library that allows applications to interact with Tor") @@ -11230,14 +11524,14 @@ List. Forked from and using the same API as the publicsuffix package.") (define-public python-freezegun (package (name "python-freezegun") - (version "0.3.7") + (version "0.3.8") (source (origin (method url-fetch) (uri (pypi-uri "freezegun" version)) (sha256 (base32 - "14l19x06v5jkq4rdwbmfyw4x9lrjb2300afrk21r1ash7y1y9a0w")))) + "1sf38d3ibv1jhhvr52x7dhrsiyqk1hm165dfv8w8wh0fhmgxg151")))) (build-system python-build-system) (native-inputs `(("python-mock" ,python-mock) @@ -11545,14 +11839,14 @@ to Python.") (define-public python-graphql-relay (package (name "python-graphql-relay") - (version "0.4.4") + (version "0.4.5") (source (origin (method url-fetch) (uri (pypi-uri "graphql-relay" version)) (sha256 (base32 - "04wr9ayshxjjdcg2v21c7ffbz36kif1wjl3604fqd3qignb3fbxi")))) + "1nv5dxcj59zv31qvl8bd142njmxcmymny2dz3br1l2cpbljbf5i7")))) (build-system python-build-system) (native-inputs `(("python-pytest" ,python-pytest))) @@ -11647,6 +11941,74 @@ provide extendible implementations of common aspects of a cloud so that you can focus on building massively scalable web applications.") (license license:expat))) +(define-public python-snowballstemmer + (package + (name "python-snowballstemmer") + (version "1.2.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "snowballstemmer" version)) + (sha256 + (base32 + "0a0idq4y5frv7qsg2x62jd7rd272749xk4x99misf5rcifk2d7wi")))) + (build-system python-build-system) + (arguments + `(;; No tests exist + #:tests? #f)) + (home-page "https://github.com/shibukawa/snowball_py") + (synopsis "Snowball stemming library collection for Python") + (description "This package provides 16 word stemmer algorithms generated +from Snowball algorithms. It includes the 15 original ones plus the Poerter +English stemmer.") + (license license:bsd-3))) + +(define-public python2-snowballstemmer + (package-with-python2 python-snowballstemmer)) + +(define-public python-sphinx-cloud-sptheme + (package + (name "python-sphinx-cloud-sptheme") + (version "1.7.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "cloud_sptheme" version)) + (sha256 + (base32 + "0zm9ap4p5dzln8f1m2immadaxv2xpg8jg4w53y52rhfl7pdb58vy")))) + (build-system python-build-system) + (native-inputs + `(("python-sphinx" ,python-sphinx))) + (home-page "https://bitbucket.org/ecollins/cloud_sptheme") + (synopsis "'Cloud' theme for Sphinx documenter") + (description "This package contains the \"Cloud\" theme for Sphinx and some +related extensions.") + (license license:bsd-3))) + +(define-public python2-sphinx-cloud-sptheme + (package-with-python2 python-sphinx-cloud-sptheme)) + +(define-public python-sphinx-alabaster-theme + (package + (name "python-sphinx-alabaster-theme") + (version "0.7.9") + (source (origin + (method url-fetch) + (uri (pypi-uri "alabaster" version)) + (sha256 + (base32 + "027anxzcb951gjlcc43y3rbn9qrw36d16vj9wd2smv5410xx9bs7")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pygments" ,python-pygments))) + (home-page "https://alabaster.readthedocs.io/") + (synopsis "Configurable sidebar-enabled Sphinx theme") + (description "Alabaster is a visually (c)lean, responsive, configurable +theme for the Sphinx documentation system. It's the default theme of Sphinx.") + (license license:bsd-3))) + +(define-public python2-sphinx-alabaster-theme + (package-with-python2 python-sphinx-alabaster-theme)) + (define-public python-betamax (package (name "python-betamax") @@ -11676,13 +12038,13 @@ replay them during future tests. It is designed to work with python-requests.") (define-public python-s3transfer (package (name "python-s3transfer") - (version "0.1.8") + (version "0.1.10") (source (origin (method url-fetch) (uri (pypi-uri "s3transfer" version)) (sha256 (base32 - "1jivjkp3xqif9gzr5fiq28jsskmh50vzzd7ldsb4rbyiw1iyv3hy")))) + "1h8g9bknvxflxkpbnxyfxmk8pvgykbbk9ljdvhqh6z4vjc2926ms")))) (build-system python-build-system) (arguments `(#:phases @@ -12210,3 +12572,72 @@ network.") (define-public python2-argcomplete (package-with-python2 python-argcomplete)) + +(define-public python-xopen + (package + (name "python-xopen") + (version "0.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "xopen" version)) + (sha256 + (base32 + "1wx6mylzcsyhjl19ycb83qq6iqpmr927lz62njfsar6ldsj0qcni")) + (file-name (string-append name "-" version ".tar.gz")))) + (build-system python-build-system) + (home-page "https://github.com/marcelm/xopen/") + (synopsis "Open compressed files transparently") + (description "This module provides an @code{xopen} function that works like +Python's built-in @code{open} function, but can also deal with compressed files. +Supported compression formats are gzip, bzip2 and, xz, and are automatically +recognized by their file extensions. The focus is on being as efficient as +possible on all supported Python versions.") + (license license:expat))) + +(define-public python2-xopen + (package-with-python2 python-xopen)) + +(define-public python2-cheetah + (package + (name "python2-cheetah") + (version "2.4.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Cheetah" version)) + (sha256 + (base32 + "0l5mm4lnysjkzpjr95q5ydm9xc8bv43fxmr79ypybrf1y0lq4c5y")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (propagated-inputs + `(("python2-markdown" ,python2-markdown))) + (home-page "https://pythonhosted.org/Cheetah/") + (synopsis "Template engine") + (description "Cheetah is a text-based template engine and Python code +generator. + +Cheetah can be used as a standalone templating utility or referenced as +a library from other Python applications. It has many potential uses, +but web developers looking for a viable alternative to ASP, JSP, PHP and +PSP are expected to be its principle user group. + +Features: +@enumerate +@item Generates HTML, SGML, XML, SQL, Postscript, form email, LaTeX, or any other + text-based format. +@item Cleanly separates content, graphic design, and program code. +@item Blends the power and flexibility of Python with a simple template language + that non-programmers can understand. +@item Gives template writers full access to any Python data structure, module, + function, object, or method in their templates. +@item Makes code reuse easy by providing an object-orientated interface to + templates that is accessible from Python code or other Cheetah templates. + One template can subclass another and selectively reimplement sections of it. +@item Provides a simple, yet powerful, caching mechanism that can dramatically + improve the performance of a dynamic website. +@item Compiles templates into optimized, yet readable, Python code. +@end enumerate") + (license (license:x11-style "file://LICENSE")))) |