diff options
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 234 |
1 files changed, 99 insertions, 135 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index c4b1f525e3..0fc6a912ca 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -183,7 +183,7 @@ This package also provides @command{xls2csv} to export Excel files to CSV.") (define r-with-tests (package (name "r-with-tests") - (version "3.6.2") + (version "3.6.3") (source (origin (method url-fetch) (uri (string-append "mirror://cran/src/base/R-" @@ -191,7 +191,7 @@ This package also provides @command{xls2csv} to export Excel files to CSV.") version ".tar.gz")) (sha256 (base32 - "0m69pfi0nxyriyb2yz74xfzaxwfkinnf9kpvf1rz727vvmfa8rdx")))) + "13xaxwfbzj0bd6rn2n27z0n04lb93mcyq991w4vdbbg8v282jc49")))) (build-system gnu-build-system) (arguments `(#:disallowed-references (,tzdata-for-tests) @@ -504,14 +504,14 @@ code for possible problems.") (define-public r-foreign (package (name "r-foreign") - (version "0.8-75") + (version "0.8-76") (source (origin (method url-fetch) (uri (cran-uri "foreign" version)) (sha256 (base32 - "0g4mi101srjbl17ydb2hl3854m3xj0llj6861lfr30sp08nkqavl")))) + "1z6x2x1z12wnv0z4p74d91r5wfaq30sdz4ynwx0lncz1q45mhbh5")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/foreign") (synopsis "Read data stored by other statistics software") @@ -548,13 +548,13 @@ estimation) corresponding to the book: Wand, M.P. and Jones, M.C. (1995) (define-public r-lattice (package (name "r-lattice") - (version "0.20-38") + (version "0.20-40") (source (origin (method url-fetch) (uri (cran-uri "lattice" version)) (sha256 (base32 - "0b8abkz7syscq883mrgv63pkwaqkcpwfx8rgbqy9vgfva0z5xszx")))) + "1w53sfzdy9zsifv44dqf9pl46fk14lnx3fha1k1p660h51lyv56m")))) (build-system r-build-system) (home-page "http://lattice.r-forge.r-project.org/") (synopsis "High-level data visualization system") @@ -590,13 +590,13 @@ and operations on them using LAPACK and SuiteSparse.") (define-public r-nlme (package (name "r-nlme") - (version "3.1-143") + (version "3.1-145") (source (origin (method url-fetch) (uri (cran-uri "nlme" version)) (sha256 - (base32 "13iixbs2ibldc75rl7rav5n5kx33zwm33xnfw1yvlkpcqf38bd22")))) + (base32 "1i9a3afdmn2ziks0imz0j09ay9n0zb9mhrymy9mg97vvlz5diwrh")))) (build-system r-build-system) (propagated-inputs `(("r-lattice" ,r-lattice))) @@ -635,14 +635,14 @@ distributions beyond the exponential family.") (define-public r-nnet (package (name "r-nnet") - (version "7.3-12") + (version "7.3-13") (source (origin (method url-fetch) (uri (cran-uri "nnet" version)) (sha256 (base32 - "17amqnw9dpap2w8ivx53hxha2xrm0drwfnj32li0xk41hlz548r7")))) + "1z0rj5cm4ycw1y0gd5wwwg8c2298v90iybgqdqh17967jbi2125f")))) (build-system r-build-system) (home-page "http://www.stats.ox.ac.uk/pub/MASS4/") (synopsis "Feed-forward neural networks and multinomial log-linear models") @@ -739,14 +739,14 @@ curves, Cox models, and parametric accelerated failure time models.") (define-public r-bit (package (name "r-bit") - (version "1.1-15.1") + (version "1.1-15.2") (source (origin (method url-fetch) (uri (cran-uri "bit" version)) (sha256 (base32 - "0y351ajlrn9ywbiai46mjpwmw5pqc9ik2z24rf0bnbdcvaxdr7r8")))) + "12xjkkkmflkz8s435by4r23b57cz7z67z84907f6qg99hn1yg0qb")))) (build-system r-build-system) (home-page "http://ff.r-forge.r-project.org") (synopsis "Class for vectors of 1-bit booleans") @@ -804,13 +804,13 @@ effects of different types of color-blindness.") (define-public r-digest (package (name "r-digest") - (version "0.6.23") + (version "0.6.25") (source (origin (method url-fetch) (uri (cran-uri "digest" version)) (sha256 - (base32 "18h5s8vkdcz2vhpsx6g3ig00zalrihr03skn95zw3lr2y56pafmp")))) + (base32 "1r9dkq0kxkps54gkmgcdngsd068p054va2vhnqhs5jmwp2vsvk0m")))) (build-system r-build-system) ;; Vignettes require r-knitr, which requires r-digest, so we have to ;; disable them and the tests. @@ -933,13 +933,13 @@ in which the whole-plots or split-plots or both can be freely exchangeable.") (define-public r-plyr (package (name "r-plyr") - (version "1.8.5") + (version "1.8.6") (source (origin (method url-fetch) (uri (cran-uri "plyr" version)) (sha256 - (base32 "0x4mbb3rgv1ayxqidw0p9i10khbg51fz5r62vw4il8d7licqq07a")))) + (base32 "11sjjdn146w95s1vsfmmgdls082cbnm1slv98xvyjhsl2mpx4mga")))) (build-system r-build-system) (propagated-inputs `(("r-rcpp" ,r-rcpp))) (home-page "http://had.co.nz/plyr") @@ -1015,14 +1015,14 @@ solution for sending email, including attachments, from within R.") (define-public r-stringi (package (name "r-stringi") - (version "1.4.5") + (version "1.4.6") (source (origin (method url-fetch) (uri (cran-uri "stringi" version)) (sha256 (base32 - "0gdmdf4i3ik8rcs7af1vlsfnilcmw3z28jx4278rpq2asigps89k")))) + "1mkgxzf000zdgbbbvg2vf4md4l501n5lfksffq8vdg6pbgd6fgv3")))) (build-system r-build-system) (inputs `(("icu4c" ,icu4c))) (native-inputs `(("pkg-config" ,pkg-config))) @@ -1177,14 +1177,14 @@ and to generate base64 encoded string from raster matrix.") (define-public r-svglite (package (name "r-svglite") - (version "1.2.2") + (version "1.2.3") (source (origin (method url-fetch) (uri (cran-uri "svglite" version)) (sha256 (base32 - "1gwv51wqp6pgm2f9gavsiq65njs77fr49n8y6y9ax60k3a4vvg14")))) + "1zivykbi1pxdxhrkc1if1ihdn5p27j0nai2q0abca1dwry3wg2yl")))) (build-system r-build-system) (propagated-inputs `(("r-bh" ,r-bh) @@ -1337,13 +1337,13 @@ supported via Andre Simon's highlight package.") (define-public r-mime (package (name "r-mime") - (version "0.8") + (version "0.9") (source (origin (method url-fetch) (uri (cran-uri "mime" version)) (sha256 (base32 - "18w98prfbivvygiyamsf9yg090kzbnvw2fn9b27823gmis4d08ny")))) + "107sqarmyhxlch5nrg796i5z03p9mshskisiq2fm628ajk99gkrc")))) (build-system r-build-system) (home-page "https://github.com/yihui/mime") (synopsis "R package to map filenames to MIME types") @@ -1382,13 +1382,13 @@ syntax that can be converted to XHTML or other formats.") (define-public r-yaml (package (name "r-yaml") - (version "2.2.0") + (version "2.2.1") (source (origin (method url-fetch) (uri (cran-uri "yaml" version)) (sha256 (base32 - "0in562nd0i23cg91a8kdbqgim656fgscykwi0icsnq53xj3srg2m")))) + "10r7g26x73am45niigm3k466030nymnr3v3fjljafzrr5aybf58i")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/yaml/") (synopsis "Methods to convert R data to YAML and back") @@ -1400,13 +1400,13 @@ emitter (http://pyyaml.org/wiki/LibYAML) for R.") (define-public r-knitr (package (name "r-knitr") - (version "1.27") + (version "1.28") (source (origin (method url-fetch) (uri (cran-uri "knitr" version)) (sha256 (base32 - "02nysgnx6xv0kd351s1d59yx4g0drsd9lmcgxs0rsw5f1jiycgdg")))) + "0ai382fmpz25qrhdgchs3vph2cdvyd73xyryg4jby5fp67d03vh5")))) (build-system r-build-system) (propagated-inputs `(("r-evaluate" ,r-evaluate) @@ -1555,13 +1555,13 @@ R packages that praise their users.") (define-public r-testthat (package (name "r-testthat") - (version "2.3.1") + (version "2.3.2") (source (origin (method url-fetch) (uri (cran-uri "testthat" version)) (sha256 (base32 - "0m8xchdpgn9iwj6gb2qw46zr85v9zf1gkbr9nnahmy5sp1s9bbky")))) + "0v70v2fs0f2ir962z9csbjlj8snrq9mbjfyhhb9dhz3zy26qs9hs")))) (build-system r-build-system) (propagated-inputs `(("r-cli" ,r-cli) @@ -1607,13 +1607,13 @@ defined in different packages.") (define-public r-rlang (package (name "r-rlang") - (version "0.4.3") + (version "0.4.5") (source (origin (method url-fetch) (uri (cran-uri "rlang" version)) (sha256 (base32 - "0qsqfikbsj55x5brghnkzzp7pz0japr4xnzm993f668mlls3f6i4")))) + "1a0h3dr519p3jj6aygbhwi9f2zwlan6d07f1gkh2db56y5vaq7yd")))) (build-system r-build-system) (home-page "http://rlang.tidyverse.org") (synopsis "Functions for base types, core R and Tidyverse features") @@ -1651,17 +1651,18 @@ and printing capabilities than traditional data frames.") (define-public r-dplyr (package (name "r-dplyr") - (version "0.8.3") + (version "0.8.4") (source (origin (method url-fetch) (uri (cran-uri "dplyr" version)) (sha256 (base32 - "032c89wa04g9rih9shyvwl3il0bsrv3xk489x6867sk9bb3amd38")))) + "1nd0mmvqjbzbknawa520f64p9zlj9lwdlq0hh7c1mciyy7ah6641")))) (build-system r-build-system) (propagated-inputs `(("r-assertthat" ,r-assertthat) ("r-bh" ,r-bh) + ("r-ellipsis" ,r-ellipsis) ("r-glue" ,r-glue) ("r-magrittr" ,r-magrittr) ("r-pkgconfig" ,r-pkgconfig) @@ -1781,13 +1782,13 @@ and density estimation.") (define-public r-chron (package (name "r-chron") - (version "2.3-54") + (version "2.3-55") (source (origin (method url-fetch) (uri (cran-uri "chron" version)) (sha256 (base32 - "0vc7dxqwx0jqzwszax6di3091npsxnhnbvr7sy7rlip0jqzarwqd")))) + "09gbs7c1ynlg0kl1m6nkbn75ysk16g13r17snnaws64qwywiywqg")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/chron") (synopsis "Chronological R objects which can handle dates and times") @@ -1958,17 +1959,19 @@ chain.") (define-public r-ade4 (package (name "r-ade4") - (version "1.7-13") + (version "1.7-15") (source (origin (method url-fetch) (uri (cran-uri "ade4" version)) (sha256 (base32 - "16z9jk4qj35ghsk4lwmq241dgc770y8a70dlmp9q4gz6d8ssgl7m")))) + "1xpxznlqm8wb4d5z2dcrl0wi3jjciq2hr5rcx2b5aaipiiyzm1ij")))) (build-system r-build-system) (propagated-inputs - `(("r-mass" ,r-mass))) + `(("r-mass" ,r-mass) + ("r-pixmap" ,r-pixmap) + ("r-sp" ,r-sp))) (home-page "http://pbil.univ-lyon1.fr/ADE-4") (synopsis "Multivariate data analysis and graphical display") (description @@ -2094,14 +2097,14 @@ R version.") (define-public r-checkmate (package (name "r-checkmate") - (version "1.9.4") + (version "2.0.0") (source (origin (method url-fetch) (uri (cran-uri "checkmate" version)) (sha256 (base32 - "08ddpgs4mv5d5y4j054pm8drmxkn7yvhfpbghwxlizjpnxa5g8ps")))) + "193gkifr9spp0x0rwnjq1spdhjkfkh4mv27iklskcj604075phhd")))) (build-system r-build-system) (propagated-inputs `(("r-backports" ,r-backports))) @@ -2375,13 +2378,13 @@ pure C implementation of the Git core methods.") (define-public r-rstudioapi (package (name "r-rstudioapi") - (version "0.10") + (version "0.11") (source (origin (method url-fetch) (uri (cran-uri "rstudioapi" version)) (sha256 (base32 - "15mbw607ncdf53mgga76n3va5zzdcjqz14nb0jcn9axwccqamic0")))) + "0srh0m4mw4k6s7spwb84l4cx4xnn04cp5cjxi0fwza7bwavpzq0k")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/rstudioapi") (synopsis "Safely access the RStudio API") @@ -2393,13 +2396,13 @@ informative error messages when it's not available.") (define-public r-devtools (package (name "r-devtools") - (version "2.2.1") + (version "2.2.2") (source (origin (method url-fetch) (uri (cran-uri "devtools" version)) (sha256 (base32 - "0i2f549hxkn0j1x1avkhwy68c9r48v9284j7x9cak2q6dfsqz61f")))) + "1bhb2j8ilpdzwd0c678mcgfpdw88vncsjma79afcikxmzcsz9279")))) (build-system r-build-system) (propagated-inputs `(("r-callr" ,r-callr) @@ -2565,13 +2568,13 @@ well as additional utilities such as panel and axis annotation functions.") (define-public r-rcpparmadillo (package (name "r-rcpparmadillo") - (version "0.9.800.4.0") + (version "0.9.850.1.0") (source (origin (method url-fetch) (uri (cran-uri "RcppArmadillo" version)) (sha256 (base32 - "1csh54v4d0ccwmk4bqj4rca1d5rqpafvb4459x3q6k9sys0charx")))) + "0q9clhmbwwph47hrhx5827m7njrcl2klihyqbkf0ihwlbqrjijwz")))) (properties `((upstream-name . "RcppArmadillo"))) (build-system r-build-system) ;; All needed for vignettes @@ -3056,14 +3059,14 @@ data.") (define-public r-foreach (package (name "r-foreach") - (version "1.4.7") + (version "1.4.8") (source (origin (method url-fetch) (uri (cran-uri "foreach" version)) (sha256 (base32 - "0q7iyniw5iri4hl57bhil3r69s5wnaijzn0q0x4h3z42245jqqwm")))) + "1xwf5l2fw62w80ji3dvgcc6m9m4s6zygkhi84ypb0gv0ppjffg5c")))) (build-system r-build-system) (propagated-inputs `(("r-codetools" ,r-codetools) @@ -3130,13 +3133,13 @@ using the multicore functionality of the parallel package.") (define-public r-dt (package (name "r-dt") - (version "0.11") + (version "0.12") (source (origin (method url-fetch) (uri (cran-uri "DT" version)) (sha256 (base32 - "09k9s07aah1apc308sj1abvr27mky6fkpl9j6lxl2x55n4immvkg")))) + "0089288ma1cj9nf4jscmpbagyqlg4r90mw8bwl4zv1d4hjl0d693")))) (properties `((upstream-name . "DT"))) (build-system r-build-system) @@ -3420,56 +3423,16 @@ memory-mapped files.") ;; Users can choose either LGPLv3 or ASL2.0. (license (list license:lgpl3 license:asl2.0)))) -(define-public r-nmf - (package - (name "r-nmf") - (version "0.21.0") - (source - (origin - (method url-fetch) - (uri (cran-uri "NMF" version)) - (sha256 - (base32 - "1qq25n3k5sgh3srlshb3ic6q92s12c1ilqf5cd5anvq6cqfchc1v")))) - (properties `((upstream-name . "NMF"))) - (build-system r-build-system) - (propagated-inputs - `(("r-cluster" ,r-cluster) - ("r-bigmemory" ,r-bigmemory) ; suggested - ("r-synchronicity" ,r-synchronicity) ; suggested - ("r-colorspace" ,r-colorspace) - ("r-digest" ,r-digest) - ("r-doparallel" ,r-doparallel) - ("r-foreach" ,r-foreach) - ("r-ggplot2" ,r-ggplot2) - ("r-gridbase" ,r-gridbase) - ("r-pkgmaker" ,r-pkgmaker) - ("r-rcolorbrewer" ,r-rcolorbrewer) - ("r-registry" ,r-registry) - ("r-reshape2" ,r-reshape2) - ("r-rngtools" ,r-rngtools) - ("r-stringr" ,r-stringr))) - (home-page "http://renozao.github.io/NMF") - (synopsis "Algorithms and framework for nonnegative matrix factorization") - (description - "This package provides a framework to perform Non-negative Matrix -Factorization (NMF). The package implements a set of already published -algorithms and seeding methods, and provides a framework to test, develop and -plug new or custom algorithms. Most of the built-in algorithms have been -optimized in C++, and the main interface function provides an easy way of -performing parallel computations on multicore machines.") - (license license:gpl2+))) - (define-public r-r-methodss3 (package (name "r-r-methodss3") - (version "1.7.1") + (version "1.8.0") (source (origin (method url-fetch) (uri (cran-uri "R.methodsS3" version)) (sha256 (base32 - "11z6v2i7jl647wxi9p5z66yvfnnqv6s7fxqmz7w2gkb6j8wl1f24")))) + "19c5870v7b59fs6xk58bh3rfkmhfralmgsax86zzpdmz47pga1g0")))) (properties `((upstream-name . "R.methodsS3"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/R.methodsS3") @@ -3590,13 +3553,13 @@ vignettes.") (define-public r-mvtnorm (package (name "r-mvtnorm") - (version "1.0-12") + (version "1.1-0") (source (origin (method url-fetch) (uri (cran-uri "mvtnorm" version)) (sha256 (base32 - "03rfmii9j8x8fjv7hp8qd28z0svl4w0x54k2f4jpwv4qa7079i24")))) + "0pfb6qk4yb6xaya8i1wvx6dnc3jj4s2g94sq2kzv4p8zn4pf24l1")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) @@ -3686,20 +3649,21 @@ more complete @code{viridis} package.") (define-public r-tidyselect (package (name "r-tidyselect") - (version "0.2.5") + (version "1.0.0") (source (origin (method url-fetch) (uri (cran-uri "tidyselect" version)) (sha256 (base32 - "0x3cp36byhfjajikr1lwffjm85ayw3bcs7d7kb0cydgs61ifiqjw")))) + "1bwwsljkg1bxh7xnqxv7n0n1s9y8x407i6lsv826vy1ss1k1fxpy")))) (build-system r-build-system) (propagated-inputs - `(("r-glue" ,r-glue) + `(("r-ellipsis" ,r-ellipsis) + ("r-glue" ,r-glue) ("r-purrr" ,r-purrr) - ("r-rcpp" ,r-rcpp) - ("r-rlang" ,r-rlang))) + ("r-rlang" ,r-rlang) + ("r-vctrs" ,r-vctrs))) (home-page "https://cran.r-project.org/web/packages/tidyselect") (synopsis "Select from a set of strings") (description @@ -3748,19 +3712,20 @@ and tidyr provides no margins or aggregation.") (define-public r-hexbin (package (name "r-hexbin") - (version "1.28.0") + (version "1.28.1") (source (origin (method url-fetch) (uri (cran-uri "hexbin" version)) (sha256 (base32 - "0b58jb1kz39wzrnkv077cfzns889xly7psvhxnm3xmnx6yvd986d")))) + "1ry6jm3lqz3mj0s5rzbs6mpkz2hxpnvbw8c1vwc4pj7b173r5l22")))) (build-system r-build-system) (propagated-inputs `(("r-lattice" ,r-lattice))) (native-inputs - `(("gfortran" ,gfortran))) + `(("gfortran" ,gfortran) + ("r-knitr" ,r-knitr))) ; for vignettes (home-page "https://github.com/edzer/hexbin") (synopsis "Hexagonal binning routines") (description @@ -3793,13 +3758,13 @@ features present in other programming languages.") (define-public r-plotly (package (name "r-plotly") - (version "4.9.1") + (version "4.9.2") (source (origin (method url-fetch) (uri (cran-uri "plotly" version)) (sha256 (base32 - "0gadam4qw81q9gpjp7sqrpd7ikmcdsc78d8vjn39g0xzs5j8r845")))) + "19zw3qnhfgqdxlvma8xyikir46aiqhfcwxf072z9xgq0hknpblm5")))) (build-system r-build-system) (propagated-inputs `(("r-base64enc" ,r-base64enc) @@ -3996,13 +3961,13 @@ package instead.") (define-public r-hmisc (package (name "r-hmisc") - (version "4.3-0") + (version "4.3-1") (source (origin (method url-fetch) (uri (cran-uri "Hmisc" version)) (sha256 - (base32 "0rb1m6138lqzb46nss9ggvhghipd10vdnwsy6iq2wzynrynzkwkz")))) + (base32 "02ni7719acdmc8pcbx07b7x2nqsjrwq4smnx9qlzqjmx4pmp3cwc")))) (properties `((upstream-name . "Hmisc"))) (build-system r-build-system) (native-inputs @@ -4125,14 +4090,14 @@ existing packages provide.") (define-public r-sfsmisc (package (name "r-sfsmisc") - (version "1.1-4") + (version "1.1-5") (source (origin (method url-fetch) (uri (cran-uri "sfsmisc" version)) (sha256 (base32 - "0zaw617zarmwir8l60riky0z6r1j3mwfnm1f32vqcbljb74akdj4")))) + "173qgm2bn84x544fc3x9gc2rv995sbsvji9lnn2drx8drvzyy8lf")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/sfsmisc") (synopsis "Utilities from \"Seminar fuer Statistik\" ETH Zurich") @@ -4214,14 +4179,14 @@ including: (define-public r-gplots (package (name "r-gplots") - (version "3.0.1.2") + (version "3.0.3") (source (origin (method url-fetch) (uri (cran-uri "gplots" version)) (sha256 (base32 - "0vrm7wqrmqsmfrc070r9chpzb0vv60pay2lyar9qxfry6bsrvx86")))) + "0hs6mk48i9yd43rg9wfjc2nxsjjwrnpifxqvxkv8ah18kvpd6xnp")))) (build-system r-build-system) (propagated-inputs `(("r-catools" ,r-catools) @@ -4266,7 +4231,7 @@ including: (build-system r-build-system) (propagated-inputs `(("r-gplots" ,r-gplots))) - (home-page "http://rocr.bioinf.mpi-sb.mpg.de/") + (home-page "https://rocr.bioinf.mpi-sb.mpg.de/") (synopsis "Visualizing the performance of scoring classifiers") (description "ROCR is a flexible tool for creating cutoff-parameterized 2D performance @@ -4440,13 +4405,13 @@ Wall Street Journal, among others. This package also provides (define-public r-statmod (package (name "r-statmod") - (version "1.4.33") + (version "1.4.34") (source (origin (method url-fetch) (uri (cran-uri "statmod" version)) (sha256 (base32 - "1fbi5m4c0lingm2vvi0g6jf8f2mg1h01xwyz5rnymrq7gs0ibiks")))) + "0yklg64aw5y8kfq5piafnrj1v3jv563iwzzl75g3kllrw23c508s")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/statmod") (native-inputs @@ -4560,17 +4525,18 @@ letters, as is often required for scientific publications.") (define-public r-mixtools (package (name "r-mixtools") - (version "1.1.0") + (version "1.2.0") (source (origin (method url-fetch) (uri (cran-uri "mixtools" version)) (sha256 (base32 - "13wdm0xs5bakhpa8ypg6lvhjaqkxyabwz4glxdwn0jwdvkcdhgsl")))) + "08whic8hmmzi55b7azwj11l2x5r9s5qbyrv7s9jr08156vqkw0zg")))) (build-system r-build-system) (propagated-inputs `(("r-mass" ,r-mass) + ("r-kernlab" ,r-kernlab) ("r-segmented" ,r-segmented) ("r-survival" ,r-survival))) (home-page "https://cran.r-project.org/web/packages/mixtools") @@ -4915,14 +4881,14 @@ multivariate analysis.") (define-public r-trimcluster (package (name "r-trimcluster") - (version "0.1-2.1") + (version "0.1-5") (source (origin (method url-fetch) (uri (cran-uri "trimcluster" version)) (sha256 (base32 - "0013bpyq6mkvjn38qsmwnsxfiwxgwngnqxycxvgpgmiadhm8fjmn")))) + "12siv8yx8dcavsz8jk96lwscbj257ar8jpaxksl2zb06987g4fcj")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/trimcluster") (synopsis "Cluster analysis with trimming") @@ -4936,14 +4902,14 @@ of the points.") (define-public r-fpc (package (name "r-fpc") - (version "2.2-4") + (version "2.2-5") (source (origin (method url-fetch) (uri (cran-uri "fpc" version)) (sha256 (base32 - "1gsnl5sbdg86b2wdrsy6wq83xj6mrziiq7rxa8cqksgljc7gp6yf")))) + "10504hzivbn89ip0cd5bcxd36ivbgin1lw1xhyh3xfckcm25v1a5")))) (build-system r-build-system) (propagated-inputs `(("r-class" ,r-class) @@ -5132,14 +5098,14 @@ expected shortfall risk are also included.") (define-public r-nloptr (package (name "r-nloptr") - (version "1.2.1") + (version "1.2.2") (source (origin (method url-fetch) (uri (cran-uri "nloptr" version)) (sha256 (base32 - "15yz60kljxwnhm2m3gryjzxl3ynhkhd5jiwc179b1hz6rlzf71hz")))) + "19k7nd3a7cg35k5i1cwj1lhgfs02jb7bc2gwlammpq6j41rh4vr7")))) (build-system r-build-system) (native-inputs `(("r-knitr" ,r-knitr) ; for building vignettes @@ -5191,17 +5157,18 @@ C++ library for numerical linear algebra and RcppEigen glue.") (define-public r-pbkrtest (package (name "r-pbkrtest") - (version "0.4-7") + (version "0.4-8.6") (source (origin (method url-fetch) (uri (cran-uri "pbkrtest" version)) (sha256 (base32 - "1si3bhi59xc51a0pgjjglccq3h4aljyhw2k1b8574s145fnh7fsw")))) + "0s5xhhrhv5i9680lw6af9lj2x4jc3fygmzzk0jjpxnb8g4b3p1jz")))) (build-system r-build-system) (propagated-inputs `(("r-lme4" ,r-lme4) + ("r-magrittr" ,r-magrittr) ("r-mass" ,r-mass) ("r-matrix" ,r-matrix))) (home-page "http://people.math.aau.dk/~sorenh/software/pbkrtest/") @@ -5264,19 +5231,16 @@ to Applied regression, Second Edition, Sage, 2011.") (define-public r-rcppprogress (package (name "r-rcppprogress") - (version "0.4.1") + (version "0.4.2") (source (origin (method url-fetch) (uri (cran-uri "RcppProgress" version)) (sha256 (base32 - "0yk01hfv961zyp569682k9igvhnwqyg5j0n5fm63sxigj82l2xhi")))) + "0j2b37gwjpgmrnr00srdzm751hzlpsjb54ph63xxmcdfnwhlnqmi")))) (properties `((upstream-name . "RcppProgress"))) (build-system r-build-system) - (propagated-inputs - `(("r-devtools" ,r-devtools) - ("r-rcpp" ,r-rcpp))) (home-page "https://github.com/kforner/rcpp_progress") (synopsis "Interruptible progress bar for C++ in R packages") (description @@ -5288,14 +5252,14 @@ even in multithreaded code, typically using OpenMP.") (define-public r-mnormt (package (name "r-mnormt") - (version "1.5-5") + (version "1.5-6") (source (origin (method url-fetch) (uri (cran-uri "mnormt" version)) (sha256 (base32 - "1b34xxrnf35khsx82mhvmk96sgfr2flyasaah7qkb2976pwxay7z")))) + "0k8y08gj6z525yvc7y3dl2kzgnafbj3i7lvpamypsmqxf74zql99")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) @@ -5331,14 +5295,14 @@ first and second order derivatives.") (define-public r-sn (package (name "r-sn") - (version "1.5-4") + (version "1.5-5") (source (origin (method url-fetch) (uri (cran-uri "sn" version)) (sha256 (base32 - "0x46gxkplxbnhaqbpiav1r4xlv4ib7n57kxmca7scqwj22y7wrs6")))) + "0ymyyc0di1g2b11wzljiih05z3rxck48wn74bygg3fiby973z49f")))) (build-system r-build-system) (propagated-inputs `(("r-mnormt" ,r-mnormt) @@ -5516,14 +5480,14 @@ and the corresponding decision threshold.") (define-public r-forcats (package (name "r-forcats") - (version "0.4.0") + (version "0.5.0") (source (origin (method url-fetch) (uri (cran-uri "forcats" version)) (sha256 (base32 - "1cnjh23z59fhbjmy7y95425hcq3m5wrwqvahsxwi7zm6d9bwp0vw")))) + "1i4hblsjgwkrcwgvgsb5yj33pw1hwdj3lr9dvxymkv1kjdw0x5lg")))) (build-system r-build-system) (propagated-inputs `(("r-ellipsis" ,r-ellipsis) @@ -5603,14 +5567,14 @@ parameters.") (define-public r-directlabels (package (name "r-directlabels") - (version "2018.05.22") + (version "2020.1.31") (source (origin (method url-fetch) (uri (cran-uri "directlabels" version)) (sha256 (base32 - "0xcpc56ssb9430b0xcdhayk3qaak2qcakyss2pz14y5w2027hblv")))) + "08s1gnwp4bn8xahwjaq0f1qzhwh2dvybzhq3z7xyzn8cnyzmis6c")))) (build-system r-build-system) (propagated-inputs `(("r-quadprog" ,r-quadprog))) |