diff options
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 1221 |
1 files changed, 542 insertions, 679 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index edb1bd4405..7435866ec6 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -152,8 +152,7 @@ be output in text, PostScript, PDF or HTML.") (build-system gnu-build-system) (home-page "http://mcmc-jags.sourceforge.net/") (native-inputs - `(("gfortran" ,gfortran) - ("lapack" ,lapack))) + (list gfortran lapack)) (synopsis "Gibbs sampler") (description "JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) @@ -515,7 +514,7 @@ Applied Statistics with S\" (4th edition, 2002) by Venables and Ripley.") "0dxyxk59fs90713qisanlvk4p0d3l8n8n7zdd4d5c290naaaw83q")))) (build-system r-build-system) (propagated-inputs - `(("r-mass" ,r-mass))) + (list r-mass)) (home-page "http://www.stats.ox.ac.uk/pub/MASS4/") (synopsis "R functions for classification") (description @@ -537,7 +536,7 @@ k-nearest neighbour, Learning Vector Quantization and Self-Organizing Maps.") "168l653ygkg21fwrqrf7lsqi5p6jzhgmcvhrwv7lznkdzdhag2jw")))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "https://cran.r-project.org/web/packages/cluster") (synopsis "Methods for cluster analysis") (description @@ -599,7 +598,7 @@ for reading and writing some dBase files.") (properties `((upstream-name . "KernSmooth"))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "https://cran.r-project.org/web/packages/KernSmooth") (synopsis "Functions for kernel smoothing") (description @@ -643,7 +642,7 @@ also flexible enough to handle most nonstandard requirements.") (properties `((upstream-name . "Matrix"))) (build-system r-build-system) (propagated-inputs - `(("r-lattice" ,r-lattice))) + (list r-lattice)) (home-page "http://Matrix.R-forge.R-project.org/") (synopsis "Sparse and dense matrix classes and methods") (description @@ -663,9 +662,9 @@ and operations on them using LAPACK and SuiteSparse.") (base32 "1qw0sq64iybyidj0s8m76z4i1gxb1fn27s29i63fw5hvvy7aj9rx")))) (build-system r-build-system) (propagated-inputs - `(("r-lattice" ,r-lattice))) + (list r-lattice)) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "https://cran.r-project.org/web/packages/nlme") (synopsis "Linear and nonlinear mixed effects models") (description @@ -685,8 +684,7 @@ nonlinear mixed-effects models.") (base32 "1fyx8b0xjyx75mp90v314gayzydkca5y90p76jnwxzfnhxbys4nd")))) (build-system r-build-system) (propagated-inputs - `(("r-matrix" ,r-matrix) - ("r-nlme" ,r-nlme))) + (list r-matrix r-nlme)) (home-page "https://cran.r-project.org/web/packages/mgcv") (synopsis "Mixed generalised additive model computation") (description @@ -767,7 +765,7 @@ analysis.") "0zrikancm9shixvgng89f1610sphlwljczi0fnjbdqn4l85rrarz")))) (build-system r-build-system) (propagated-inputs - `(("r-matrix" ,r-matrix))) + (list r-matrix)) (home-page "https://github.com/therneau/survival") (synopsis "Survival analysis") (description @@ -783,22 +781,22 @@ curves, Cox models, and parametric accelerated failure time models.") (build-system trivial-build-system) (arguments '(#:builder (begin (mkdir %output) #t))) (propagated-inputs - `(("r-minimal" ,r-minimal) - ("r-boot" ,r-boot) - ("r-class" ,r-class) - ("r-cluster" ,r-cluster) - ("r-codetools" ,r-codetools) - ("r-foreign" ,r-foreign) - ("r-kernsmooth" ,r-kernsmooth) - ("r-lattice" ,r-lattice) - ("r-mass" ,r-mass) - ("r-matrix" ,r-matrix) - ("r-mgcv" ,r-mgcv) - ("r-nlme" ,r-nlme) - ("r-nnet" ,r-nnet) - ("r-rpart" ,r-rpart) - ("r-spatial" ,r-spatial) - ("r-survival" ,r-survival))))) + (list r-minimal + r-boot + r-class + r-cluster + r-codetools + r-foreign + r-kernsmooth + r-lattice + r-mass + r-matrix + r-mgcv + r-nlme + r-nnet + r-rpart + r-spatial + r-survival)))) (define-public r-bit (package @@ -813,7 +811,7 @@ curves, Cox models, and parametric accelerated failure time models.") "0s7isadibxp2wr62r5cpbyh9z31sczzfz4j3rm7gxgjfpqgq8174")))) (build-system r-build-system) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "http://ff.r-forge.r-project.org") (synopsis "Class for vectors of 1-bit booleans") (description @@ -836,7 +834,7 @@ binary booleans, @code{TRUE} and @code{FALSE} can be stored with 1 bit only.") "0y0m7q1rwam1g88cjx7zyi07mj5dipxd9jkl90f294syx8k6ipr5")))) (build-system r-build-system) (propagated-inputs - `(("r-bit" ,r-bit))) + (list r-bit)) (home-page "http://ff.r-forge.r-project.org/") (synopsis "S3 class for vectors of 64 bit integers") (description @@ -969,7 +967,7 @@ see package vignette. To quote Rene Magritte, \"Ceci n'est pas un pipe.\"") (base32 "16g1fzisbpqb15yh3pqf3iia4csppva5dnv1z88x9dg263xskwyh")))) (build-system r-build-system) (propagated-inputs - `(("r-colorspace" ,r-colorspace))) + (list r-colorspace)) (home-page "https://cran.r-project.org/web/packages/munsell") (synopsis "Munsell colour system") (description @@ -1011,7 +1009,7 @@ in which the whole-plots or split-plots or both can be freely exchangeable.") (sha256 (base32 "11sjjdn146w95s1vsfmmgdls082cbnm1slv98xvyjhsl2mpx4mga")))) (build-system r-build-system) - (propagated-inputs `(("r-rcpp" ,r-rcpp))) + (propagated-inputs (list r-rcpp)) (home-page "http://had.co.nz/plyr") (synopsis "Tools for Splitting, Applying and Combining Data") (description @@ -1073,7 +1071,7 @@ designed by Cynthia Brewer as described at http://colorbrewer2.org") (properties `((upstream-name . "sendmailR"))) (build-system r-build-system) (propagated-inputs - `(("r-base64enc" ,r-base64enc))) + (list r-base64enc)) (home-page "https://cran.r-project.org/web/packages/sendmailR") (synopsis "Send email using R") @@ -1094,8 +1092,8 @@ solution for sending email, including attachments, from within R.") (base32 "0r959gzyqkq9683qdfy95g9plwpj3c73n9lhf0a6byybw4scq519")))) (build-system r-build-system) - (inputs `(("icu4c" ,icu4c))) - (native-inputs `(("pkg-config" ,pkg-config))) + (inputs (list icu4c)) + (native-inputs (list pkg-config)) (home-page "http://stringi.rexamine.com/") (synopsis "Character string processing facilities") (description @@ -1120,9 +1118,7 @@ transliteration, concatenation, date-time formatting and parsing, etc.") (base32 "1p9ip7p87gbbg4s6d3d392svvzz2b5dqdq2c8ilgvn4s78nlsq47")))) (build-system r-build-system) (propagated-inputs - `(("r-glue" ,r-glue) - ("r-magrittr" ,r-magrittr) - ("r-stringi" ,r-stringi))) + (list r-glue r-magrittr r-stringi)) (home-page "https://github.com/hadley/stringr") (synopsis "Simple, consistent wrappers for common string operations") (description @@ -1145,9 +1141,7 @@ the input of another.") (base32 "1n0jrajpvc8hjkh9z4g8bwq63qy5vy5cgl2pzjardyih4ngcz3fq")))) (build-system r-build-system) (propagated-inputs - `(("r-plyr" ,r-plyr) - ("r-rcpp" ,r-rcpp) - ("r-stringr" ,r-stringr))) + (list r-plyr r-rcpp r-stringr)) (home-page "https://github.com/hadley/reshape") (synopsis "Flexibly reshape data: a reboot of the \"reshape\" package") (description @@ -1167,19 +1161,19 @@ using just two functions: melt and dcast (or acast).") (base32 "1si46bf9p09qzs208hqffwcb40305p361whmwhc1pwrsmx7jjxdh")))) (build-system r-build-system) (propagated-inputs - `(("r-digest" ,r-digest) - ("r-glue" ,r-glue) - ("r-gtable" ,r-gtable) - ("r-isoband" ,r-isoband) - ("r-mass" ,r-mass) - ("r-mgcv" ,r-mgcv) - ("r-tibble" ,r-tibble) - ("r-rlang" ,r-rlang) - ("r-scales" ,r-scales) - ("r-svglite" ,r-svglite) ; Needed for 'ggsave' - ("r-withr" ,r-withr))) + (list r-digest + r-glue + r-gtable + r-isoband + r-mass + r-mgcv + r-tibble + r-rlang + r-scales + r-svglite ; Needed for 'ggsave' + r-withr)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://ggplot2.tidyverse.org") (synopsis "An implementation of the grammar of graphics") (description @@ -1203,10 +1197,9 @@ aesthetic attributes.") "0skbj487b6f6pj2iz4yq2b9gbgb39cv5dyzhdl3w7ay1k0s5z9ph")))) (build-system r-build-system) (propagated-inputs - `(("r-ggplot2" ,r-ggplot2) - ("r-mass" ,r-mass))) + (list r-ggplot2 r-mass)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/andrie/ggdendro") (synopsis "Create Dendrograms and Tree Diagrams Using ggplot2") (description "This is a set of tools for dendrograms and tree plots using @@ -1231,14 +1224,13 @@ agnes cluster diagrams.") "1p3ip0qwpg8f63jfx0b8vbac6l20ddid8xvxzkfi6i858pybnawp")))) (build-system r-build-system) (native-inputs - `(("pkg-config" ,pkg-config))) + (list pkg-config)) (inputs `(("cairo" ,cairo) ("freetype2" ,freetype) ("zlib" ,zlib))) (propagated-inputs - `(("r-rcpp" ,r-rcpp) - ("r-systemfonts" ,r-systemfonts))) + (list r-rcpp r-systemfonts)) (home-page "https://cran.r-project.org/web/packages/gdtools") (synopsis "Utilities for graphical rendering") (description @@ -1259,13 +1251,11 @@ and to generate base64 encoded string from raster matrix.") "19ggknw5322yw7r1bzhw0bqggcrpn0qxddk7kblpqnra2zz2brkn")))) (build-system r-build-system) (inputs - `(("libpng" ,libpng) - ("zlib" ,zlib))) + (list libpng zlib)) (propagated-inputs - `(("r-cpp11" ,r-cpp11) - ("r-systemfonts" ,r-systemfonts))) + (list r-cpp11 r-systemfonts)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/hadley/svglite") (synopsis "SVG graphics device") (description @@ -1325,7 +1315,7 @@ evaluation (NSE) in R.") "0i0kfyg43nryyka2bjlgz4x75w965224qp36wz1hl7a2lswb6ajp")))) (build-system r-build-system) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/rstats-db/DBI") (synopsis "R database interface") (description @@ -1385,7 +1375,7 @@ adapted for other output formats, such as HTML or LaTeX.") "0353aj975mj0yjc91z76bbfy86y7d5cvlqqyfr93cdng14nnd0dx")))) (build-system r-build-system) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://yihui.org/formatr/") (synopsis "Format R code automatically") (description @@ -1407,7 +1397,7 @@ There is also a Shiny app as a user interface in this package.") "0kgdv2vf1lz3b5kbal9s83gg6812nw7fvrq0rkyr0v4k1lwi3zxy")))) (build-system r-build-system) (propagated-inputs - `(("r-xfun" ,r-xfun))) + (list r-xfun)) ;; We cannot add knitr to the inputs, because highr depends on xfun, which ;; is an input to knitr. #; @@ -1456,8 +1446,7 @@ data derived from /etc/mime.types in UNIX-type systems.") ;; package. (arguments `(#:tests? #f)) (propagated-inputs - `(("r-mime" ,r-mime) - ("r-xfun" ,r-xfun))) + (list r-mime r-xfun)) (home-page "https://github.com/rstudio/markdown") (synopsis "Markdown rendering for R") (description @@ -1496,11 +1485,7 @@ emitter (http://pyyaml.org/wiki/LibYAML) for R.") "0hcf5gii0qlvv15f86y6h08qp0hd9lcrykzj0mdfjdfi52sgbkkf")))) (build-system r-build-system) (propagated-inputs - `(("r-evaluate" ,r-evaluate) - ("r-highr" ,r-highr) - ("r-stringr" ,r-stringr) - ("r-xfun" ,r-xfun) - ("r-yaml" ,r-yaml))) + (list r-evaluate r-highr r-stringr r-xfun r-yaml)) (home-page "https://yihui.org/knitr/") (synopsis "General-purpose package for dynamic report generation in R") (description @@ -1525,9 +1510,7 @@ generation in R using Literate Programming techniques.") (properties `((upstream-name . "knitrBootstrap"))) (build-system r-build-system) (propagated-inputs - `(("r-knitr" ,r-knitr) - ("r-rmarkdown" ,r-rmarkdown) - ("r-markdown" ,r-markdown))) + (list r-knitr r-rmarkdown r-markdown)) (home-page "https://github.com/jimhester/knitrBootstrap") (synopsis "Knitr bootstrap framework") (description @@ -1565,10 +1548,7 @@ the execution time of R expressions.") "02vp1y7zhv22id43j5c0gdcgn9171dyypqp8rqrlc3w5a7n565kv")))) (build-system r-build-system) (propagated-inputs - `(("r-codetools" ,r-codetools) - ("r-lobstr" ,r-lobstr) - ("r-rcpp" ,r-rcpp) - ("r-stringr" ,r-stringr))) + (list r-codetools r-lobstr r-rcpp r-stringr)) (home-page "https://github.com/hadley/pryr") (synopsis "Tools for computing on the R language") (description @@ -1588,8 +1568,7 @@ understand the language at a deeper level.") "1bzcv7pmls3bx2w5ccv1pm20wycbfqba1v76k0fjgmjsm6hy76pz")))) (build-system r-build-system) (propagated-inputs - `(("r-cachem" ,r-cachem) - ("r-rlang" ,r-rlang))) + (list r-cachem r-rlang)) (home-page "https://github.com/hadley/memoise") (synopsis "Memoise functions for R") (description @@ -1649,27 +1628,27 @@ R packages that praise their users.") "11s98q0gm37z1cqzwvdm9pq26v0zbdq9vc5ssl1nsxhsi42v2577")))) (build-system r-build-system) (propagated-inputs - `(("r-brio" ,r-brio) - ("r-callr" ,r-callr) - ("r-cli" ,r-cli) - ("r-crayon" ,r-crayon) - ("r-desc" ,r-desc) - ("r-digest" ,r-digest) - ("r-ellipsis" ,r-ellipsis) - ("r-evaluate" ,r-evaluate) - ("r-jsonlite" ,r-jsonlite) - ("r-lifecycle" ,r-lifecycle) - ("r-magrittr" ,r-magrittr) - ("r-pkgload" ,r-pkgload) - ("r-praise" ,r-praise) - ("r-processx" ,r-processx) - ("r-ps" ,r-ps) - ("r-r6" ,r-r6) - ("r-rlang" ,r-rlang) - ("r-waldo" ,r-waldo) - ("r-withr" ,r-withr))) + (list r-brio + r-callr + r-cli + r-crayon + r-desc + r-digest + r-ellipsis + r-evaluate + r-jsonlite + r-lifecycle + r-magrittr + r-pkgload + r-praise + r-processx + r-ps + r-r6 + r-rlang + r-waldo + r-withr)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/hadley/testthat") (synopsis "Unit testing for R") (description @@ -1730,16 +1709,16 @@ like tidy evaluation.") "14l2i6ri3v5y0h8g0ahc4kz0pdqsp5yabxk2w8wavss6y44xjcsv")))) (build-system r-build-system) (propagated-inputs - `(("r-ellipsis" ,r-ellipsis) - ("r-fansi" ,r-fansi) - ("r-lifecycle" ,r-lifecycle) - ("r-magrittr" ,r-magrittr) - ("r-pkgconfig" ,r-pkgconfig) - ("r-pillar" ,r-pillar) - ("r-rlang" ,r-rlang) - ("r-vctrs" ,r-vctrs))) + (list r-ellipsis + r-fansi + r-lifecycle + r-magrittr + r-pkgconfig + r-pillar + r-rlang + r-vctrs)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/hadley/tibble") (synopsis "Simple data frames") (description @@ -1759,19 +1738,19 @@ and printing capabilities than traditional data frames.") "0g8jsxclj9cgm7a2lyazy78sj62rbzw812lsw3fdsbz0pknkmznj")))) (build-system r-build-system) (propagated-inputs - `(("r-ellipsis" ,r-ellipsis) - ("r-generics" ,r-generics) - ("r-glue" ,r-glue) - ("r-lifecycle" ,r-lifecycle) - ("r-magrittr" ,r-magrittr) - ("r-pillar" ,r-pillar) - ("r-r6" ,r-r6) - ("r-rlang" ,r-rlang) - ("r-tibble" ,r-tibble) - ("r-tidyselect" ,r-tidyselect) - ("r-vctrs" ,r-vctrs))) + (list r-ellipsis + r-generics + r-glue + r-lifecycle + r-magrittr + r-pillar + r-r6 + r-rlang + r-tibble + r-tidyselect + r-vctrs)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/hadley/dplyr") (synopsis "Tools for working with data frames in R") (description @@ -1797,23 +1776,23 @@ database.") "025wqpmxdhzblb0pf58m3qh5h6bf5x8qvkf47vyl1cjsp13wz95b")))) (build-system r-build-system) (propagated-inputs - `(("r-assertthat" ,r-assertthat) - ("r-blob" ,r-blob) - ("r-dbi" ,r-dbi) - ("r-dplyr" ,r-dplyr) - ("r-ellipsis" ,r-ellipsis) - ("r-glue" ,r-glue) - ("r-lifecycle" ,r-lifecycle) - ("r-magrittr" ,r-magrittr) - ("r-purrr" ,r-purrr) - ("r-r6" ,r-r6) - ("r-rlang" ,r-rlang) - ("r-tibble" ,r-tibble) - ("r-tidyselect" ,r-tidyselect) - ("r-vctrs" ,r-vctrs) - ("r-withr" ,r-withr))) + (list r-assertthat + r-blob + r-dbi + r-dplyr + r-ellipsis + r-glue + r-lifecycle + r-magrittr + r-purrr + r-r6 + r-rlang + r-tibble + r-tidyselect + r-vctrs + r-withr)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/tidyverse/dbplyr") (synopsis "Dplyr back end for databases") (description @@ -1836,7 +1815,7 @@ features require SQL translation to be provided by the package author.") "1f98rpfjmhd92rdc3j004plyfpjailz6j0ycysbac0kgj83haxc2")))) (build-system r-build-system) (inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "https://cran.r-project.org/web/packages/acepack") (synopsis "Functions for regression transformations") (description @@ -1879,7 +1858,7 @@ side.") "1vcw16qww4v4547w0gfvhqg60l051bsdlxa6zfcgcj9xbxf6dlyr")))) (build-system r-build-system) (propagated-inputs - `(("r-lattice" ,r-lattice))) + (list r-lattice)) (home-page "https://cran.r-project.org/web/packages/locfit") (synopsis "Local regression, likelihood and density estimation") (description @@ -1917,10 +1896,9 @@ times.") "0arx5wna0sh0vf5q8rjhh8nqdmnvg2pdpbhljl9l0x4kwm8vjhgp")))) (build-system r-build-system) (inputs - `(("zlib" ,zlib))) + (list zlib)) (native-inputs - `(("pkg-config" ,pkg-config) - ("r-knitr" ,r-knitr))) + (list pkg-config r-knitr)) (home-page "https://github.com/Rdatatable/data.table/wiki") (synopsis "Enhanced version of data.frame R object") (description @@ -1943,7 +1921,7 @@ and fast file reading.") "077xfm0gphvhsay75amd9v90zk57kjgrrlgih04fyrbqqblc1gjs")))) (build-system r-build-system) (native-inputs - `(("r-knitr" ,r-knitr))) ; for vignettes + (list r-knitr)) ; for vignettes (home-page "http://xtable.r-forge.r-project.org/") (synopsis "Export R tables to LaTeX or HTML") (description @@ -1968,11 +1946,9 @@ and fast file reading.") (lambda* (#:key tests? #:allow-other-keys) (when tests? (invoke "pytest" "-vv"))))))) (propagated-inputs - `(("python-numpy" ,python-numpy) - ("python-scipy" ,python-scipy) - ("python-six" ,python-six))) + (list python-numpy python-scipy python-six)) (native-inputs - `(("python-pytest" ,python-pytest))) + (list python-pytest)) (home-page "https://github.com/pydata/patsy") (synopsis "Describe statistical models and build design matrices") (description @@ -2017,15 +1993,10 @@ building design matrices.") line))) #t))))) (propagated-inputs - `(("python-numpy" ,python-numpy) - ("python-scipy" ,python-scipy) - ("python-pandas" ,python-pandas) - ("python-patsy" ,python-patsy) - ("python-matplotlib" ,python-matplotlib))) + (list python-numpy python-scipy python-pandas python-patsy + python-matplotlib)) (native-inputs - `(("python-cython" ,python-cython) - ("python-nose" ,python-nose) - ("python-sphinx" ,python-sphinx))) + (list python-cython python-nose python-sphinx)) (home-page "http://statsmodels.sourceforge.net/") (synopsis "Statistical modeling and econometrics in Python") (description @@ -2067,7 +2038,7 @@ inference for statistical models.") "13z5dwfpnyyhpsbpg4xr9g5c1685jhqj90f4x4qkcykr6kykqba2")))) (build-system r-build-system) (propagated-inputs - `(("r-lattice" ,r-lattice))) + (list r-lattice)) (home-page "https://cran.r-project.org/web/packages/coda") (synopsis "This is a package for Output Analysis and Diagnostics for MCMC") (description "This package provides functions for summarizing and plotting @@ -2089,9 +2060,7 @@ chain.") "09f5kh2mwygqpnvf53k0r54k0cvaafxm9x4nm819gwv05k2g9dpc")))) (build-system r-build-system) (propagated-inputs - `(("r-mass" ,r-mass) - ("r-pixmap" ,r-pixmap) - ("r-sp" ,r-sp))) + (list r-mass r-pixmap r-sp)) (home-page "http://pbil.univ-lyon1.fr/ADE-4") (synopsis "Multivariate data analysis and graphical display") (description @@ -2112,11 +2081,9 @@ and environmental data in the framework of Euclidean exploratory methods.") "1kx400v62xkd5xal7rzz7jcarz94ac8g1sh4i2dqr78qwgkzj8nz")))) (build-system r-build-system) (inputs - `(("libxml2" ,libxml2) - ("zlib" ,zlib))) + (list libxml2 zlib)) (native-inputs - `(("pkg-config" ,pkg-config) - ("r-knitr" ,r-knitr))) + (list pkg-config r-knitr)) (home-page "https://github.com/hadley/xml2") (synopsis "Parse XML with R") (description @@ -2137,7 +2104,7 @@ files in R. It is built on top of the libxml2 C library.") "1gm3wr8xqpqiby7q1dr3zxim77v0bvvrqi0hlazf5g3gnkrp2zc3")))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "https://github.com/wesleyburr/multitaper/") (synopsis "Multitaper spectral analysis tools") (description @@ -2162,8 +2129,7 @@ jackknifed confidence intervals are available for most estimates.") "1cbwwbz8lqx2n33xr4q904whvld22s63rpyy1nn93395l7ssrakr")))) (build-system r-build-system) (propagated-inputs - `(("r-curl" ,r-curl) - ("r-xml2" ,r-xml2))) + (list r-curl r-xml2)) (home-page "https://github.com/metacran/rversions") (synopsis "Query R versions, including 'r-release' and 'r-oldrel'") (description @@ -2226,7 +2192,7 @@ R version.") "193gkifr9spp0x0rwnjq1spdhjkfkh4mv27iklskcj604075phhd")))) (build-system r-build-system) (propagated-inputs - `(("r-backports" ,r-backports))) + (list r-backports)) (home-page "https://github.com/mllg/checkmate") (synopsis "Fast and versatile argument checks") (description @@ -2249,7 +2215,7 @@ worries about execution time overhead.") (properties `((upstream-name . "BBmisc"))) (build-system r-build-system) (propagated-inputs - `(("r-checkmate" ,r-checkmate))) + (list r-checkmate)) (home-page "https://github.com/berndbischl/BBmisc") (synopsis "Miscellaneous functions for R package development") (description @@ -2270,8 +2236,7 @@ of R packages.") "0vfm6kmpmgsamda5p0sl771kbnsscan31l2chzssyw93kwmams7d")))) (build-system r-build-system) (propagated-inputs - `(("r-bbmisc" ,r-bbmisc) - ("r-checkmate" ,r-checkmate))) + (list r-bbmisc r-checkmate)) (home-page "https://github.com/mllg/fail") (synopsis "File abstraction interface layer (FAIL)") (description @@ -2293,16 +2258,16 @@ or source files in a key-value fashion.") (properties `((upstream-name . "BatchJobs"))) (build-system r-build-system) (propagated-inputs - `(("r-backports" ,r-backports) - ("r-bbmisc" ,r-bbmisc) - ("r-brew" ,r-brew) - ("r-checkmate" ,r-checkmate) - ("r-data-table" ,r-data-table) - ("r-dbi" ,r-dbi) - ("r-digest" ,r-digest) - ("r-rsqlite" ,r-rsqlite) - ("r-sendmailr" ,r-sendmailr) - ("r-stringi" ,r-stringi))) + (list r-backports + r-bbmisc + r-brew + r-checkmate + r-data-table + r-dbi + r-digest + r-rsqlite + r-sendmailr + r-stringi)) (home-page "https://github.com/tudo-r/BatchJobs") (synopsis "Batch computing with R") (description @@ -2343,9 +2308,7 @@ module, Java Server Pages, and Python's psp module.") "0jfnwn1kpiill8v4hmzdk90yz4gk2ha0prr2p0hq36s40v3y8842")))) (build-system r-build-system) (propagated-inputs - `(("r-crayon" ,r-crayon) - ("r-r6" ,r-r6) - ("r-rprojroot" ,r-rprojroot))) + (list r-crayon r-r6 r-rprojroot)) (home-page "https://github.com/r-pkgs/desc") (synopsis "Manipulate DESCRIPTION Files") (description @@ -2389,21 +2352,21 @@ tables, autolinks and strikethrough text.") "1zf55wywlpy7mk7zfyi3s9fhhg1m9kvafzj46iqw5cbvnlg3ssdk")))) (build-system r-build-system) (propagated-inputs - `(("r-brew" ,r-brew) - ("r-commonmark" ,r-commonmark) - ("r-cpp11" ,r-cpp11) - ("r-desc" ,r-desc) - ("r-digest" ,r-digest) - ("r-knitr" ,r-knitr) - ("r-pkgload" ,r-pkgload) - ("r-purrr" ,r-purrr) - ("r-r6" ,r-r6) - ("r-rlang" ,r-rlang) - ("r-stringi" ,r-stringi) - ("r-stringr" ,r-stringr) - ("r-xml2" ,r-xml2))) + (list r-brew + r-commonmark + r-cpp11 + r-desc + r-digest + r-knitr + r-pkgload + r-purrr + r-r6 + r-rlang + r-stringi + r-stringr + r-xml2)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/klutometis/roxygen") (synopsis "In-source documentation system for R") (description @@ -2424,12 +2387,11 @@ collation, and NAMESPACE files.") "1xy1w0rljzsgvsg91fh9hs6h9rx58mza1vg6rig9ykp9m2ml3hag")))) (build-system r-build-system) (inputs - `(("libressl" ,libressl))) + (list libressl)) (native-inputs - `(("pkg-config" ,pkg-config) - ("r-knitr" ,r-knitr))) + (list pkg-config r-knitr)) (propagated-inputs - `(("r-askpass" ,r-askpass))) + (list r-askpass)) (home-page "https://github.com/jeroenooms/openssl") (synopsis "Toolkit for encryption, signatures and certificates") (description @@ -2457,13 +2419,9 @@ integers.") "1y8y1g1dkgv9jafrk1kj6pzxpw95c0rr9lplblfq2byrs1pfsas6")))) (build-system r-build-system) (propagated-inputs - `(("r-curl" ,r-curl) - ("r-jsonlite" ,r-jsonlite) - ("r-openssl" ,r-openssl) - ("r-mime" ,r-mime) - ("r-r6" ,r-r6))) + (list r-curl r-jsonlite r-openssl r-mime r-r6)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/hadley/httr") (synopsis "Tools for working with URLs and HTTP") (description @@ -2485,10 +2443,9 @@ functions make it easy to control additional request components.") "13nlrhma6kavvhranb43w3003vadfkyrn2f4l3r63iqavj0s3xzq")))) (build-system r-build-system) (inputs - `(("libgit2" ,libgit2) - ("zlib" ,zlib))) + (list libgit2 zlib)) (native-inputs - `(("pkg-config" ,pkg-config))) + (list pkg-config)) (home-page "https://github.com/ropensci/git2r") (synopsis "Access Git repositories with R") (description @@ -2509,7 +2466,7 @@ pure C implementation of the Git core methods.") "12vdfzzjc6mv4h105l8cp108j3hjk0mqmg23m6mqr3jarfymphxa")))) (build-system r-build-system) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://cran.r-project.org/web/packages/rstudioapi") (synopsis "Safely access the RStudio API") (description @@ -2529,28 +2486,28 @@ informative error messages when it's not available.") "01cg2ykg0av6z7bgl41njcxcii8vjj8ipch26xazp4yjai8abw3i")))) (build-system r-build-system) (propagated-inputs - `(("r-callr" ,r-callr) - ("r-cli" ,r-cli) - ("r-desc" ,r-desc) - ("r-ellipsis" ,r-ellipsis) - ("r-fs" ,r-fs) - ("r-httr" ,r-httr) - ("r-lifecycle" ,r-lifecycle) - ("r-memoise" ,r-memoise) - ("r-pkgbuild" ,r-pkgbuild) - ("r-pkgload" ,r-pkgload) - ("r-rcmdcheck" ,r-rcmdcheck) - ("r-remotes" ,r-remotes) - ("r-rlang" ,r-rlang) - ("r-roxygen2" ,r-roxygen2) - ("r-rstudioapi" ,r-rstudioapi) - ("r-rversions" ,r-rversions) - ("r-sessioninfo" ,r-sessioninfo) - ("r-testthat" ,r-testthat) - ("r-usethis" ,r-usethis) - ("r-withr" ,r-withr))) + (list r-callr + r-cli + r-desc + r-ellipsis + r-fs + r-httr + r-lifecycle + r-memoise + r-pkgbuild + r-pkgload + r-rcmdcheck + r-remotes + r-rlang + r-roxygen2 + r-rstudioapi + r-rversions + r-sessioninfo + r-testthat + r-usethis + r-withr)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/hadley/devtools") (synopsis "Tools to make developing R packages easier") (description "The devtools package is a collection of package development @@ -2569,7 +2526,7 @@ tools to simplify the devolpment of R packages.") "1j5srffi748yxphwli56lkbh4cga0kmz38dyzganzkw0nx66mya8")))) (build-system r-build-system) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/jimhester/withr") (synopsis "Run code with temporarily modified global state") (description @@ -2591,11 +2548,7 @@ were originally a part of the r-devtools package.") "0qlh4s1g9rbm6c3s906dhw3xsz28m8fg6cyynlkhvis533dk0pvb")))) (build-system r-build-system) (propagated-inputs - `(("r-ellipsis" ,r-ellipsis) - ("r-lifecycle" ,r-lifecycle) - ("r-pkgconfig" ,r-pkgconfig) - ("r-rlang" ,r-rlang) - ("r-vctrs" ,r-vctrs))) + (list r-ellipsis r-lifecycle r-pkgconfig r-rlang r-vctrs)) (home-page "https://github.com/rstats-db/hms") (synopsis "Pretty time of day") (description @@ -2615,19 +2568,19 @@ time-of-day values, based on the @code{difftime} class.") "03d7y4k9w5vcm7fwlcaw715ff7d953i92jwbp7ynrqcr09kw6zm0")))) (build-system r-build-system) (propagated-inputs - `(("r-cli" ,r-cli) - ("r-clipr" ,r-clipr) - ("r-cpp11" ,r-cpp11) - ("r-crayon" ,r-crayon) - ("r-hms" ,r-hms) - ("r-lifecycle" ,r-lifecycle) - ("r-tibble" ,r-tibble) - ("r-r6" ,r-r6) - ("r-rlang" ,r-rlang) - ("r-tzdb" ,r-tzdb) - ("r-vroom" ,r-vroom))) + (list r-cli + r-clipr + r-cpp11 + r-crayon + r-hms + r-lifecycle + r-tibble + r-r6 + r-rlang + r-tzdb + r-vroom)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/hadley/readr") (synopsis "Read tabular data") (description @@ -2684,10 +2637,7 @@ scaling functions for R.") (properties `((upstream-name . "latticeExtra"))) (build-system r-build-system) (propagated-inputs - `(("r-jpeg" ,r-jpeg) - ("r-lattice" ,r-lattice) - ("r-png" ,r-png) - ("r-rcolorbrewer" ,r-rcolorbrewer))) + (list r-jpeg r-lattice r-png r-rcolorbrewer)) (home-page "http://latticeextra.r-forge.r-project.org/") (synopsis "Extra graphical utilities based on lattice") (description @@ -2709,7 +2659,7 @@ well as additional utilities such as panel and axis annotation functions.") (properties `((upstream-name . "RcppArmadillo"))) (build-system r-build-system) (propagated-inputs - `(("r-rcpp" ,r-rcpp))) + (list r-rcpp)) (home-page "https://github.com/RcppCore/RcppArmadillo") (synopsis "Rcpp integration for the Armadillo linear algebra library") (description @@ -2755,7 +2705,7 @@ vectors.") (properties `((upstream-name . "caTools"))) (build-system r-build-system) (propagated-inputs - `(("r-bitops" ,r-bitops))) + (list r-bitops)) (home-page "https://cran.r-project.org/web/packages/caTools") (synopsis "Various tools including functions for moving window statistics") (description @@ -2778,7 +2728,7 @@ encoder/decoder, round-off-error-free sum and cumsum, etc.") "07wy07yhms8zln9qb0iwx69dq08h4lrdi8kavjcplfxcskq638az")))) (build-system r-build-system) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/krlmlr/rprojroot") (synopsis "Finding files in project subdirectories") (description @@ -2801,18 +2751,18 @@ certain criterion, e.g., it contains a certain regular file.") (properties `((upstream-name . "rmarkdown"))) (build-system r-build-system) (propagated-inputs - `(("r-evaluate" ,r-evaluate) - ("r-htmltools" ,r-htmltools) - ("r-jquerylib" ,r-jquerylib) - ("r-jsonlite" ,r-jsonlite) - ("r-knitr" ,r-knitr) - ("r-stringr" ,r-stringr) - ("r-tinytex" ,r-tinytex) - ("r-xfun" ,r-xfun) - ("r-yaml" ,r-yaml) - ("pandoc" ,pandoc))) + (list r-evaluate + r-htmltools + r-jquerylib + r-jsonlite + r-knitr + r-stringr + r-tinytex + r-xfun + r-yaml + pandoc)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://rmarkdown.rstudio.com") (synopsis "Convert R Markdown documents into a variety of formats") (description @@ -2852,9 +2802,9 @@ variety of formats.") (properties `((upstream-name . "gridExtra"))) (build-system r-build-system) (propagated-inputs - `(("r-gtable" ,r-gtable))) + (list r-gtable)) (native-inputs - `(("r-knitr" ,r-knitr))) ;for building vignettes + (list r-knitr)) ;for building vignettes (home-page "https://github.com/baptiste/gridextra") (synopsis "Miscellaneous functions for \"Grid\" graphics") (description @@ -2893,8 +2843,7 @@ that package, other packages are unaffected.") "1yn7f13icaix0apxp4drnciwdn8bx8xmbd129jd7ck4rcly0axj9")))) (build-system r-build-system) (propagated-inputs - `(("r-rlang" ,r-rlang) - ("r-vctrs" ,r-vctrs))) + (list r-rlang r-vctrs)) (home-page "https://github.com/hadley/blob") (synopsis "Simple S3 Class for representing vectors of binary data") (description "Raw vectors in R are useful for storing a single binary @@ -2916,15 +2865,15 @@ a column in data frame.") (properties `((upstream-name . "RSQLite"))) (build-system r-build-system) (propagated-inputs - `(("r-dbi" ,r-dbi) - ("r-memoise" ,r-memoise) - ("r-plogr" ,r-plogr) - ("r-rcpp" ,r-rcpp) - ("r-bit64" ,r-bit64) - ("r-blob" ,r-blob) - ("r-pkgconfig" ,r-pkgconfig))) + (list r-dbi + r-memoise + r-plogr + r-rcpp + r-bit64 + r-blob + r-pkgconfig)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/rstats-db/RSQLite") (synopsis "SQLite interface for R") (description @@ -2962,7 +2911,7 @@ if (certs != \"\") { .opts = merge.list(.opts, list(cainfo=certs)) } (inputs `(("libcurl" ,curl))) (propagated-inputs - `(("r-bitops" ,r-bitops))) + (list r-bitops)) (home-page "http://www.omegahat.net/RCurl") (synopsis "General network client interface for R") (description @@ -2990,10 +2939,9 @@ ldap, and also supports cookies, redirects, authentication, etc.") `((upstream-name . "XML"))) (build-system r-build-system) (inputs - `(("libxml2" ,libxml2) - ("zlib" ,zlib))) + (list libxml2 zlib)) (native-inputs - `(("pkg-config" ,pkg-config))) + (list pkg-config)) (home-page "http://www.omegahat.net/RSXML") (synopsis "Tools for parsing and generating XML within R") (description @@ -3043,7 +2991,7 @@ plotted and compared with the asymptotic curve.") (properties `((upstream-name . "lambda.r"))) (build-system r-build-system) (propagated-inputs - `(("r-formatr" ,r-formatr))) + (list r-formatr)) (home-page "https://cran.r-project.org/web/packages/lambda.r") (synopsis "Functional programming extension for R") (description @@ -3088,8 +3036,7 @@ options defined in other packages.") (properties `((upstream-name . "futile.logger"))) (build-system r-build-system) (propagated-inputs - `(("r-futile-options" ,r-futile-options) - ("r-lambda-r" ,r-lambda-r))) + (list r-futile-options r-lambda-r)) (home-page "https://cran.r-project.org/web/packages/futile.logger") (synopsis "Logging utility for R") (description @@ -3153,7 +3100,7 @@ worker processes and collect and return the results on the master.") (properties `((upstream-name . "SparseM"))) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (build-system r-build-system) (home-page "http://www.econ.uiuc.edu/~roger/research/sparse/sparse.html") (synopsis "Sparse linear algebra") @@ -3196,10 +3143,9 @@ data.") "1qb83b1jvpmk8d6kfibkm5q2hiki0x5gipy758mwa62n56gdcnpv")))) (build-system r-build-system) (propagated-inputs - `(("r-codetools" ,r-codetools) - ("r-iterators" ,r-iterators))) + (list r-codetools r-iterators)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://cran.r-project.org/web/packages/foreach") (synopsis "Foreach looping construct for R") (description @@ -3227,8 +3173,7 @@ parallel.") (properties `((upstream-name . "doParallel"))) (build-system r-build-system) (propagated-inputs - `(("r-foreach" ,r-foreach) - ("r-iterators" ,r-iterators))) + (list r-foreach r-iterators)) (home-page "https://cran.r-project.org/web/packages/doParallel") (synopsis "Foreach parallel adaptor for the 'parallel' package") (description @@ -3250,8 +3195,7 @@ using the parallel package.") (properties `((upstream-name . "doMC"))) (build-system r-build-system) (propagated-inputs - `(("r-foreach" ,r-foreach) - ("r-iterators" ,r-iterators))) + (list r-foreach r-iterators)) (home-page "https://cran.r-project.org/web/packages/doMC") (synopsis "Foreach parallel adaptor for the 'parallel' package") (description @@ -3601,15 +3545,15 @@ using the multicore functionality of the parallel package.") (string-append (assoc-ref inputs "js-selectize") "/share/javascript/selectize.min.js"))))))))) (propagated-inputs - `(("r-crosstalk" ,r-crosstalk) - ("r-htmltools" ,r-htmltools) - ("r-htmlwidgets" ,r-htmlwidgets) - ("r-jquerylib" ,r-jquerylib) - ("r-jsonlite" ,r-jsonlite) - ("r-magrittr" ,r-magrittr) - ("r-promises" ,r-promises))) + (list r-crosstalk + r-htmltools + r-htmlwidgets + r-jquerylib + r-jsonlite + r-magrittr + r-promises)) (inputs - `(("js-selectize" ,js-selectize))) + (list js-selectize)) (native-inputs `(("r-knitr" ,r-knitr) ("uglifyjs" ,node-uglify-js) @@ -3686,7 +3630,7 @@ flexible than the orphaned \"base64\" package.") "1h7mzrqdjc41814cf6c93sbyl7nxwvsf3x8apl9rhmydgdlk7qkf")))) (build-system r-build-system) (propagated-inputs - `(("r-matrix" ,r-matrix))) + (list r-matrix)) (home-page "https://cran.r-project.org/web/packages/irlba") (synopsis "Methods for eigendecomposition of large matrices") (description @@ -3707,15 +3651,14 @@ analysis of large sparse or dense matrices.") (base32 "0nij8v44b5dvp1vc843sfkl9ds83n6g687m2p37q1rdn82m3bg34")))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran) - ("r-knitr" ,r-knitr))) + (list gfortran r-knitr)) (propagated-inputs - `(("r-foreach" ,r-foreach) - ("r-matrix" ,r-matrix) - ("r-rcpp" ,r-rcpp) - ("r-rcppeigen" ,r-rcppeigen) - ("r-shape" ,r-shape) - ("r-survival" ,r-survival))) + (list r-foreach + r-matrix + r-rcpp + r-rcppeigen + r-shape + r-survival)) (home-page "https://www.jstatsoft.org/article/view/v033i01") (synopsis "Lasso and elastic-net regularized generalized linear models") (description @@ -3739,13 +3682,13 @@ path-wise fashion.") "14ggsd24n5g5rvn0wl4w90ipxzmywqikh28llj89q6kpxwnv4iff")))) (build-system r-build-system) (propagated-inputs - `(("r-assertthat" ,r-assertthat) - ("r-codetools" ,r-codetools) - ("r-digest" ,r-digest) - ("r-registry" ,r-registry) - ("r-stringr" ,r-stringr) - ("r-withr" ,r-withr) - ("r-xtable" ,r-xtable))) + (list r-assertthat + r-codetools + r-digest + r-registry + r-stringr + r-withr + r-xtable)) (home-page "https://renozao.github.io/pkgmaker") (synopsis "Package development utilities") (description @@ -3786,7 +3729,7 @@ package registries.") "0kd7x214cqw7hzpmk1iqy1bn7j6x0ady0yz2hsdbclbq9k57d33z")))) (build-system r-build-system) (propagated-inputs - `(("r-digest" ,r-digest))) + (list r-digest)) (home-page "https://renozao.github.io/rngtools") (synopsis "Utility functions for working with random number generators") (description @@ -3811,7 +3754,7 @@ the way current RNG settings can be changed.") (properties `((upstream-name . "Rtsne"))) (build-system r-build-system) (propagated-inputs - `(("r-rcpp" ,r-rcpp))) + (list r-rcpp)) (home-page "https://github.com/jkrijthe/Rtsne") (synopsis "T-distributed stochastic neighbor embedding") (description @@ -3834,8 +3777,7 @@ Stochastic Neighbor Embedding using a Barnes-Hut implementation.") "09i2hmyf1bxansqp24p9n9djlzzarclqs173gjjv3fg0giga3ycv")))) (build-system r-build-system) (propagated-inputs - `(("r-class" ,r-class) - ("r-proxy" ,r-proxy))) + (list r-class r-proxy)) (home-page "https://cran.r-project.org/web/packages/e1071") (synopsis "Miscellaneous functions for probability theory") (description @@ -3877,10 +3819,7 @@ bigmemory and synchronicity packages.") "1kgsk64aifjm3mfj102y3va7x1abypq2zi0cqbnjhl8fqyzp69hx")))) (build-system r-build-system) (propagated-inputs - `(("r-bh" ,r-bh) - ("r-bigmemory-sri" ,r-bigmemory-sri) - ("r-rcpp" ,r-rcpp) - ("r-uuid" ,r-uuid))) + (list r-bh r-bigmemory-sri r-rcpp r-uuid)) (home-page "http://www.bigmemory.org") (synopsis "Boost mutex functionality in R") (description "This package provides support for synchronization @@ -3902,9 +3841,7 @@ message passing.") "03pg8mxdc7q0249visjmc8bc3xmwxsfg3i2n6higicj4cfz7zihq")))) (build-system r-build-system) (propagated-inputs - `(("r-bh" ,r-bh) - ("r-rcpp" ,r-rcpp) - ("r-bigmemory-sri" ,r-bigmemory-sri))) + (list r-bh r-rcpp r-bigmemory-sri)) (home-page "http://www.bigmemory.org") (synopsis "Manage large matrices with shared memory or memory-mapped files") (description "This package provides methods to create, store, access, and @@ -3950,7 +3887,7 @@ want to migrate to S4.") (properties `((upstream-name . "R.oo"))) (build-system r-build-system) (propagated-inputs - `(("r-r-methodss3" ,r-r-methodss3))) + (list r-r-methodss3)) (home-page "https://github.com/HenrikBengtsson/R.oo") (synopsis "R object-oriented programming with or without references") (description @@ -3973,8 +3910,7 @@ maintenance for package developers.") (properties `((upstream-name . "R.utils"))) (build-system r-build-system) (propagated-inputs - `(("r-r-methodss3" ,r-r-methodss3) - ("r-r-oo" ,r-r-oo))) + (list r-r-methodss3 r-r-oo)) (home-page "https://github.com/HenrikBengtsson/R.utils") (synopsis "Various programming utilities") (description @@ -4000,10 +3936,7 @@ developing R packages.") (add-after 'unpack 'set-HOME (lambda _ (setenv "HOME" "/tmp")))))) (propagated-inputs - `(("r-digest" ,r-digest) - ("r-r-methodss3" ,r-r-methodss3) - ("r-r-oo" ,r-r-oo) - ("r-r-utils" ,r-r-utils))) + (list r-digest r-r-methodss3 r-r-oo r-r-utils)) (home-page "https://github.com/HenrikBengtsson/R.cache") (synopsis "Light-weight caching of objects and results") (description @@ -4031,11 +3964,7 @@ persistent (on the file system).") (add-after 'unpack 'set-HOME (lambda _ (setenv "HOME" "/tmp")))))) (propagated-inputs - `(("r-digest" ,r-digest) - ("r-r-cache" ,r-r-cache) - ("r-r-methodss3" ,r-r-methodss3) - ("r-r-oo" ,r-r-oo) - ("r-r-utils" ,r-r-utils))) + (list r-digest r-r-cache r-r-methodss3 r-r-oo r-r-utils)) (home-page "https://github.com/HenrikBengtsson/R.rsp") (synopsis "Dynamic generation of scientific reports") (description @@ -4062,7 +3991,7 @@ vignettes.") "0j14q2bkc14v35s5k03sw44zsssrd2qjljlwzj014qxs74hk0kpz")))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "http://mvtnorm.R-forge.R-project.org") (synopsis "Package for multivariate normal and t-distributions") (description "This package can compute multivariate normal and @@ -4087,7 +4016,7 @@ t-probabilities, quantiles, random deviates and densities.") (add-after 'unpack 'set-HOME (lambda _ (setenv "HOME" "/tmp")))))) (native-inputs - `(("r-r-rsp" ,r-r-rsp))) ;used to build vignettes + (list r-r-rsp)) ;used to build vignettes (home-page "https://github.com/HenrikBengtsson/matrixStats") (synopsis "Methods applying to vectors and matrix rows and columns") (description @@ -4110,11 +4039,9 @@ memory usage.") "048kwhbhd49g86cq11fl7vm0whwhjl5gs9xjn040lwcjv78qrdb9")))) (build-system r-build-system) (propagated-inputs - `(("r-ggplot2" ,r-ggplot2) - ("r-gridextra" ,r-gridextra) - ("r-viridislite" ,r-viridislite))) + (list r-ggplot2 r-gridextra r-viridislite)) (native-inputs - `(("r-knitr" ,r-knitr))) ; for vignettes + (list r-knitr)) ; for vignettes (home-page "https://github.com/sjmgarnier/viridis") (synopsis "Matplotlib default color map") (description @@ -4166,13 +4093,9 @@ more complete @code{viridis} package.") "0ss8mq05mwif64cj8zmrfx0ljgy3n0fvyv7f37782shr8rknmsqq")))) (build-system r-build-system) (propagated-inputs - `(("r-ellipsis" ,r-ellipsis) - ("r-glue" ,r-glue) - ("r-purrr" ,r-purrr) - ("r-rlang" ,r-rlang) - ("r-vctrs" ,r-vctrs))) + (list r-ellipsis r-glue r-purrr r-rlang r-vctrs)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://cran.r-project.org/web/packages/tidyselect") (synopsis "Select from a set of strings") (description @@ -4195,19 +4118,19 @@ selection.") "0h8jfsmn4r7zgfyjmg2qkjd54n0sncq07xjh4mdf2cx4k2z9h30b")))) (build-system r-build-system) (propagated-inputs - `(("r-cpp11" ,r-cpp11) - ("r-dplyr" ,r-dplyr) - ("r-ellipsis" ,r-ellipsis) - ("r-magrittr" ,r-magrittr) - ("r-glue" ,r-glue) - ("r-lifecycle" ,r-lifecycle) - ("r-purrr" ,r-purrr) - ("r-rlang" ,r-rlang) - ("r-tidyselect" ,r-tidyselect) - ("r-tibble" ,r-tibble) - ("r-vctrs" ,r-vctrs))) + (list r-cpp11 + r-dplyr + r-ellipsis + r-magrittr + r-glue + r-lifecycle + r-purrr + r-rlang + r-tidyselect + r-tibble + r-vctrs)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/hadley/tidyr") (synopsis "Tidy data with `spread()` and `gather()` functions") (description @@ -4232,10 +4155,9 @@ and tidyr provides no margins or aggregation.") "0bbhs5pwxh474w62sq6gqvih7habancxng9wd4f2rgn6lv9zhhb2")))) (build-system r-build-system) (propagated-inputs - `(("r-lattice" ,r-lattice))) + (list r-lattice)) (native-inputs - `(("gfortran" ,gfortran) - ("r-knitr" ,r-knitr))) ; for vignettes + (list gfortran r-knitr)) ; for vignettes (home-page "https://github.com/edzer/hexbin") (synopsis "Hexagonal binning routines") (description @@ -4256,10 +4178,9 @@ It uses and relies on grid graphics and formal (S4) classes and methods.") "1cj091rsjdj2xz16qhynyw72gh5cyhznifcfbrbygndfr4xwksr3")))) (build-system r-build-system) (propagated-inputs - `(("r-magrittr" ,r-magrittr) - ("r-rlang" ,r-rlang))) + (list r-magrittr r-rlang)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/hadley/purrr") (synopsis "Functional programming tools") (description @@ -4279,27 +4200,27 @@ features present in other programming languages.") "16iqj7sv49mva6siibsci7iijsbnk7pqvfns9al0k35w9mjmr6dx")))) (build-system r-build-system) (propagated-inputs - `(("r-base64enc" ,r-base64enc) - ("r-crosstalk" ,r-crosstalk) - ("r-digest" ,r-digest) - ("r-data-table" ,r-data-table) - ("r-dplyr" ,r-dplyr) - ("r-ggplot2" ,r-ggplot2) - ("r-htmltools" ,r-htmltools) - ("r-htmlwidgets" ,r-htmlwidgets) - ("r-httr" ,r-httr) - ("r-jsonlite" ,r-jsonlite) - ("r-lazyeval" ,r-lazyeval) - ("r-magrittr" ,r-magrittr) - ("r-promises" ,r-promises) - ("r-purrr" ,r-purrr) - ("r-rcolorbrewer" ,r-rcolorbrewer) - ("r-rlang" ,r-rlang) - ("r-scales" ,r-scales) - ("r-tibble" ,r-tibble) - ("r-tidyr" ,r-tidyr) - ("r-vctrs" ,r-vctrs) - ("r-viridislite" ,r-viridislite))) + (list r-base64enc + r-crosstalk + r-digest + r-data-table + r-dplyr + r-ggplot2 + r-htmltools + r-htmlwidgets + r-httr + r-jsonlite + r-lazyeval + r-magrittr + r-promises + r-purrr + r-rcolorbrewer + r-rlang + r-scales + r-tibble + r-tidyr + r-vctrs + r-viridislite)) (home-page "https://plot.ly/r") (synopsis "Create interactive web graphics") (description @@ -4365,8 +4286,7 @@ character vector.") "16fgi3annn34c3cxi0pxf62mmmmxi21hp0zzlv7bkfsjqy4g4f2x")))) (build-system r-build-system) (propagated-inputs - `(("r-rematch" ,r-rematch) - ("r-tibble" ,r-tibble))) + (list r-rematch r-tibble)) (home-page "https://github.com/rsheets/cellranger") (synopsis "Translate spreadsheet cell ranges to rows and columns") (description @@ -4387,16 +4307,16 @@ character vector.") "11q07nxys72wkxx9mawmjyf20gvwvrb7h3gpa73h6lgh2vgrwnv8")))) (build-system r-build-system) (propagated-inputs - `(("r-cellranger" ,r-cellranger) - ("r-dplyr" ,r-dplyr) - ("r-httr" ,r-httr) - ("r-jsonlite" ,r-jsonlite) - ("r-purrr" ,r-purrr) - ("r-readr" ,r-readr) - ("r-stringr" ,r-stringr) - ("r-tibble" ,r-tibble) - ("r-tidyr" ,r-tidyr) - ("r-xml2" ,r-xml2))) + (list r-cellranger + r-dplyr + r-httr + r-jsonlite + r-purrr + r-readr + r-stringr + r-tibble + r-tidyr + r-xml2)) (home-page "https://github.com/jennybc/googlesheets") (synopsis "Manage Google spreadsheets from R") (description "This package provides tools to interact with Google Sheets @@ -4429,8 +4349,7 @@ from within R.") (("-mtune=native") "")) #t))))) (propagated-inputs - `(("r-lattice" ,r-lattice) - ("r-matrix" ,r-matrix))) + (list r-lattice r-matrix)) (home-page "https://spams-devel.gforge.inria.fr") (synopsis "Toolbox for solving sparse estimation problems") (description "SPAMS (SPArse Modeling Software) is an optimization toolbox @@ -4461,7 +4380,7 @@ following problems: "1labh0ycdm2xcjssj8bhnyjvbk44mcdsi0rb2p8rfqa428mrq9cf")))) (build-system r-build-system) (propagated-inputs - `(("r-openssl" ,r-openssl))) + (list r-openssl)) (home-page "https://cran.r-project.org/web/packages/base64") (synopsis "Base64 encoder and decoder") (description @@ -4483,24 +4402,24 @@ package instead.") (properties `((upstream-name . "Hmisc"))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (propagated-inputs - `(("r-base64enc" ,r-base64enc) - ("r-cluster" ,r-cluster) - ("r-data-table" ,r-data-table) - ("r-foreign" ,r-foreign) - ("r-formula" ,r-formula) - ("r-ggplot2" ,r-ggplot2) - ("r-gridextra" ,r-gridextra) - ("r-gtable" ,r-gtable) - ("r-lattice" ,r-lattice) - ("r-latticeextra" ,r-latticeextra) - ("r-htmltable" ,r-htmltable) - ("r-htmltools" ,r-htmltools) - ("r-nnet" ,r-nnet) - ("r-rpart" ,r-rpart) - ("r-survival" ,r-survival) - ("r-viridis" ,r-viridis))) + (list r-base64enc + r-cluster + r-data-table + r-foreign + r-formula + r-ggplot2 + r-gridextra + r-gtable + r-lattice + r-latticeextra + r-htmltable + r-htmltools + r-nnet + r-rpart + r-survival + r-viridis)) (home-page "http://biostat.mc.vanderbilt.edu/Hmisc") (synopsis "Miscellaneous data analysis and graphics functions") (description @@ -4631,9 +4550,9 @@ tests for whether a value is missing, empty or contains only @code{NA} and "0zwdj7lscgxr8r62ii8hbdh4mb7sa9w4f5nv32zzrxdvymcpya2b")))) (build-system r-build-system) (inputs - `(("perl" ,perl))) + (list perl)) (propagated-inputs - `(("r-gtools" ,r-gtools))) + (list r-gtools)) (home-page "https://cran.r-project.org/web/packages/gdata") (synopsis "Various R programming tools for data manipulation") (description @@ -4671,11 +4590,9 @@ including: "0f8khaymz383w2ksnk80d4kpnvgmdk37pbycpsnl2vabaz11kbpr")))) (build-system r-build-system) (propagated-inputs - `(("r-catools" ,r-catools) - ("r-gtools" ,r-gtools) - ("r-kernsmooth" ,r-kernsmooth))) + (list r-catools r-gtools r-kernsmooth)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://cran.r-project.org/web/packages/gplots") (synopsis "Various R programming tools for plotting data") (description @@ -4713,9 +4630,9 @@ including: (properties `((upstream-name . "ROCR"))) (build-system r-build-system) (propagated-inputs - `(("r-gplots" ,r-gplots))) + (list r-gplots)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://rocr.bioinf.mpi-sb.mpg.de/") (synopsis "Visualizing the performance of scoring classifiers") (description @@ -4743,15 +4660,15 @@ mechanism.") "1ps7ix0hc84s0p0ra6bkjxky3cffs1rvdcagqzj78lbdq22dk5j8")))) (build-system r-build-system) (propagated-inputs - `(("r-flextable" ,r-flextable) - ("r-magrittr" ,r-magrittr) - ("r-officer" ,r-officer) - ("r-rcolorbrewer" ,r-rcolorbrewer) - ("r-rstudioapi" ,r-rstudioapi) - ("r-scales" ,r-scales) - ("r-stringr" ,r-stringr))) + (list r-flextable + r-magrittr + r-officer + r-rcolorbrewer + r-rstudioapi + r-scales + r-stringr)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://cran.r-project.org/web/packages/ztable") (synopsis "Zebra-striped tables in LaTeX and HTML formats for R") (description @@ -4832,9 +4749,7 @@ representation of R code.") "0crk29p5vi1r3a988kms4y7r0iqwgwzsikgvh18r9wbzyr98bb5v")))) (build-system r-build-system) (propagated-inputs - `(("r-beeswarm" ,r-beeswarm) - ("r-ggplot2" ,r-ggplot2) - ("r-vipor" ,r-vipor))) + (list r-beeswarm r-ggplot2 r-vipor)) (home-page "https://github.com/eclarke/ggbeeswarm") (synopsis "Categorical scatter (violin point) plots") (description @@ -4855,11 +4770,7 @@ data at that region, and avoids over-plotting.") "0rw5f6axyz1pqn6qx9jwm38hjzn8bqs1nfjkvm96z3xnyn61cdbv")))) (build-system r-build-system) (propagated-inputs - `(("r-ggplot2" ,r-ggplot2) - ("r-purrr" ,r-purrr) - ("r-scales" ,r-scales) - ("r-stringr" ,r-stringr) - ("r-tibble" ,r-tibble))) + (list r-ggplot2 r-purrr r-scales r-stringr r-tibble)) (home-page "https://cran.rstudio.com/web/packages/ggthemes") (synopsis "Extra themes, scales and geoms for @code{ggplot2}") (description "This package provides extra themes and scales for @@ -4882,7 +4793,7 @@ Wall Street Journal, among others. This package also provides (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/statmod") (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (synopsis "Statistical modeling") (description "This package provides a collection of algorithms and functions to aid @@ -4930,13 +4841,13 @@ approximate, exact searches, fixed radius searches, bd and kb trees.") "0fcc8rq745nsghp27dk0lgih90y4zx8hrzcvsn6ih786yv7qxhvl")))) (build-system r-build-system) (propagated-inputs - `(("r-knitr" ,r-knitr) - ("r-rmarkdown" ,r-rmarkdown) - ("r-dplyr" ,r-dplyr) - ("r-readr" ,r-readr) - ("r-ggplot2" ,r-ggplot2) - ("r-magrittr" ,r-magrittr) - ("r-stringr" ,r-stringr))) + (list r-knitr + r-rmarkdown + r-dplyr + r-readr + r-ggplot2 + r-magrittr + r-stringr)) (home-page "https://mran.microsoft.com/package/fivethirtyeight/") (synopsis "Data and code behind the stories at FiveThirtyEight") (description "This R package provides access to the code and data sets @@ -4977,12 +4888,9 @@ Farebrother's algorithm or Liu et al.'s algorithm.") "0j7d5vhzdxn1blrsfafx5z8lhq122rp8230hp9czrpsnnhjydp67")))) (build-system r-build-system) (propagated-inputs - `(("r-ggplot2" ,r-ggplot2) - ("r-gtable" ,r-gtable) - ("r-rlang" ,r-rlang) - ("r-scales" ,r-scales))) + (list r-ggplot2 r-gtable r-rlang r-scales)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/wilkelab/cowplot") (synopsis "Streamlined plot theme and plot annotations for ggplot2") (description @@ -5004,10 +4912,7 @@ letters, as is often required for scientific publications.") "08whic8hmmzi55b7azwj11l2x5r9s5qbyrv7s9jr08156vqkw0zg")))) (build-system r-build-system) (propagated-inputs - `(("r-mass" ,r-mass) - ("r-kernlab" ,r-kernlab) - ("r-segmented" ,r-segmented) - ("r-survival" ,r-survival))) + (list r-mass r-kernlab r-segmented r-survival)) (home-page "https://cran.r-project.org/web/packages/mixtools") (synopsis "Tools for analyzing finite mixture models") (description @@ -5028,7 +4933,7 @@ mixture models.") "0blj44wqrx6lmym1m9v6wkz8zxzbjax2zl6swgdczci0ixb5nx34")))) (build-system r-build-system) (inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "https://web.stanford.edu/~hastie/Papers/LARS/") (synopsis "Least angle regression software") (description @@ -5077,7 +4982,7 @@ perform @dfn{independent component analysis} (ICA) and projection pursuit.") (build-system r-build-system) (home-page "https://www.stat.berkeley.edu/~breiman/RandomForests/") (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (synopsis "Breiman and Cutler's random forests for classification and regression") (description "This package provides the Breiman and Cutler's random forests algorithm, based on a @@ -5137,9 +5042,7 @@ to change in the future.") "0jangf89174p0idh9afbicfiln2sz8jxc3bjc6n0j9036dw9n09n")))) (build-system r-build-system) (propagated-inputs - `(("r-lattice" ,r-lattice) - ("r-modeltools" ,r-modeltools) - ("r-nnet" ,r-nnet))) + (list r-lattice r-modeltools r-nnet)) (home-page "https://cran.r-project.org/web/packages/flexmix") (synopsis "Flexible mixture modeling") (description @@ -5163,8 +5066,7 @@ models, generalized linear models and model-based clustering.") "0j79a1nidwxl62x8j97k09qjxladp9irw5z1x1q5gyy6zxskvh8i")))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran) - ("r-knitr" ,r-knitr))) + (list gfortran r-knitr)) (home-page "https://www.stat.washington.edu/mclust/") (synopsis "Gaussian mixture modelling for model-based clustering etc.") (description @@ -5187,8 +5089,7 @@ and resampling-based inference.") "0hg4d7y1w18jpgvw10z8833bbbcnlkwiasx0wh6iwa2pnnybq8gl")))) (build-system r-build-system) (propagated-inputs - `(("r-mass" ,r-mass) - ("r-mclust" ,r-mclust))) + (list r-mass r-mclust)) (home-page "https://cran.r-project.org/web/packages/prabclus") (synopsis "Parametric bootstrap tests for spatial neighborhood clustering") (description @@ -5234,9 +5135,9 @@ can be efficiently implemented directly in the R language.") "0i9wf4aq8zpn2np6z2rjja21ks9n740dgkiv0qfwdzk3ah3vapyp")))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (propagated-inputs - `(("r-deoptimr" ,r-deoptimr))) + (list r-deoptimr)) (home-page "http://robustbase.r-forge.r-project.org/") (synopsis "Basic robust statistics") (description @@ -5258,7 +5159,7 @@ regression methodology including model selections and multivariate statistics.") (properties `((upstream-name . "pcaPP"))) (build-system r-build-system) (propagated-inputs - `(("r-mvtnorm" ,r-mvtnorm))) + (list r-mvtnorm)) (home-page "https://cran.r-project.org/web/packages/pcaPP") (synopsis "Robust PCA by projection pursuit") (description @@ -5279,12 +5180,9 @@ analysis} (PCA) by projection pursuit.") "0i69gv55c86gkclwhch0jzdfyb20l20mx1nx1xp9qz71nd4klpvr")))) (build-system r-build-system) (propagated-inputs - `(("r-lattice" ,r-lattice) - ("r-mvtnorm" ,r-mvtnorm) - ("r-pcapp" ,r-pcapp) - ("r-robustbase" ,r-robustbase))) + (list r-lattice r-mvtnorm r-pcapp r-robustbase)) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "https://cran.r-project.org/web/packages/rrcov") (synopsis "Scalable robust estimators with high breakdown Point") (description @@ -5306,7 +5204,7 @@ estimation and robust multivariate analysis with high breakdown point.") (properties `((upstream-name . "fit.models"))) (build-system r-build-system) (propagated-inputs - `(("r-lattice" ,r-lattice))) + (list r-lattice)) (home-page "https://cran.r-project.org/web/packages/fit.models") (synopsis "Compare fitted models") (description @@ -5333,13 +5231,9 @@ generally.") "0z8i0qqlsa6vpl457qir3dlsynhjfn2g22436d776vxwyqjx4vs9")))) (build-system r-build-system) (propagated-inputs - `(("r-fit-models" ,r-fit-models) - ("r-lattice" ,r-lattice) - ("r-mass" ,r-mass) - ("r-robustbase" ,r-robustbase) - ("r-rrcov" ,r-rrcov))) + (list r-fit-models r-lattice r-mass r-robustbase r-rrcov)) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "https://cran.r-project.org/web/packages/robust") (synopsis "Port of the S+ \"Robust Library\"") (description @@ -5382,15 +5276,15 @@ of the points.") "0f7sfmpcycr9y7cy5gasyjm2ardxa62kglqms92mcr68jrp01c19")))) (build-system r-build-system) (propagated-inputs - `(("r-class" ,r-class) - ("r-cluster" ,r-cluster) - ("r-diptest" ,r-diptest) - ("r-flexmix" ,r-flexmix) - ("r-kernlab" ,r-kernlab) - ("r-mass" ,r-mass) - ("r-mclust" ,r-mclust) - ("r-prabclus" ,r-prabclus) - ("r-robustbase" ,r-robustbase))) + (list r-class + r-cluster + r-diptest + r-flexmix + r-kernlab + r-mass + r-mclust + r-prabclus + r-robustbase)) (home-page "https://cran.r-project.org/web/packages/fpc") (synopsis "Flexible procedures for clustering") (description @@ -5414,7 +5308,7 @@ groupings.") (properties `((upstream-name . "VGAM"))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "https://www.stat.auckland.ac.nz/~yee/VGAM") (synopsis "Vector generalized linear and additive models") (description @@ -5458,9 +5352,9 @@ showing the progress is useful e.g. bootstrap.") "036drja6xz7awja9iwb76x91415p26fb0jmg7y7v0p65m6j978fg")))) (build-system r-build-system) (propagated-inputs - `(("r-rcpp" ,r-rcpp))) + (list r-rcpp)) (inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "http://optimizer.r-forge.r-project.org") (synopsis "Derivative-free optimization algorithms by quadratic approximation") (description @@ -5482,8 +5376,7 @@ based on an interface to Fortran implementations by M. J. D. Powell.") (properties `((upstream-name . "RcppEigen"))) (build-system r-build-system) (propagated-inputs - `(("r-rcpp" ,r-rcpp) - ("r-matrix" ,r-matrix))) + (list r-rcpp r-matrix)) (home-page "http://eigen.tuxfamily.org") (synopsis "Rcpp integration for the Eigen templated linear algebra library") (description @@ -5507,8 +5400,7 @@ decompositions of such matrices, and solutions of linear systems.") (properties `((upstream-name . "ModelMetrics"))) (build-system r-build-system) (propagated-inputs - `(("r-rcpp" ,r-rcpp) - ("r-data-table" ,r-data-table))) + (list r-rcpp r-data-table)) (home-page "https://cran.r-project.org/web/packages/ModelMetrics") (synopsis "Rapid calculation of model metrics") (description @@ -5530,7 +5422,7 @@ metrics for evaluating models.") (properties `((upstream-name . "MatrixModels"))) (build-system r-build-system) (propagated-inputs - `(("r-matrix" ,r-matrix))) + (list r-matrix)) (home-page "https://cran.r-project.org/web/packages/MatrixModels") (synopsis "Modelling with sparse and dense matrices") (description @@ -5550,12 +5442,9 @@ using modular prediction and response module classes.") (base32 "01fnp6ndh7npxj76xlynndacsgmcfr9kgh2waw0clx3mmwlwilbi")))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (propagated-inputs - `(("r-conquer" ,r-conquer) - ("r-matrix" ,r-matrix) - ("r-matrixmodels" ,r-matrixmodels) - ("r-sparsem" ,r-sparsem))) + (list r-conquer r-matrix r-matrixmodels r-sparsem)) (home-page "https://www.r-project.org") (synopsis "Quantile regression") (description @@ -5579,11 +5468,10 @@ expected shortfall risk are also included.") "1zznk9f2w2g02zqzay21k8xqzfvc6icxfzp6bx2wpd77sm7vf25g")))) (build-system r-build-system) (native-inputs - `(("r-knitr" ,r-knitr) ; for building vignettes - ("pkg-config" ,pkg-config) - ("gfortran" ,gfortran))) + (list r-knitr ; for building vignettes + pkg-config gfortran)) (inputs - `(("nlopt" ,nlopt))) + (list nlopt)) (home-page "https://cran.r-project.org/web/packages/nloptr") (synopsis "R interface to NLopt") (description @@ -5607,17 +5495,17 @@ algorithms.") "1i9f8kl2qj48j75dbn1vmwxz1xlbikdr7v2yq542w6dq74z8gyi5")))) (build-system r-build-system) (propagated-inputs - `(("r-boot" ,r-boot) - ("r-lattice" ,r-lattice) - ("r-mass" ,r-mass) - ("r-matrix" ,r-matrix) - ("r-minqa" ,r-minqa) - ("r-nloptr" ,r-nloptr) - ("r-nlme" ,r-nlme) - ("r-rcpp" ,r-rcpp) - ("r-rcppeigen" ,r-rcppeigen))) + (list r-boot + r-lattice + r-mass + r-matrix + r-minqa + r-nloptr + r-nlme + r-rcpp + r-rcppeigen)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://cran.r-project.org/web/packages/lme4") (synopsis "Linear mixed-effects models using eigen and S4") (description @@ -5640,15 +5528,15 @@ C++ library for numerical linear algebra and RcppEigen glue.") "1if7msv9i7jhg1as1f7m81a95dnwhwj3yfs24bqr0f6r0ch4b8xj")))) (build-system r-build-system) (propagated-inputs - `(("r-broom" ,r-broom) - ("r-dplyr" ,r-dplyr) - ("r-lme4" ,r-lme4) - ("r-magrittr" ,r-magrittr) - ("r-mass" ,r-mass) - ("r-matrix" ,r-matrix) - ("r-numderiv" ,r-numderiv))) + (list r-broom + r-dplyr + r-lme4 + r-magrittr + r-mass + r-matrix + r-numderiv)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://people.math.aau.dk/~sorenh/software/pbkrtest/") (synopsis "Methods for linear mixed model comparison") (description @@ -5688,18 +5576,18 @@ Companion to Applied Regression, Third Edition, Sage.") (base32 "00kk8l71508f73kyn21is1mx6kjbrzdq3ls94c5ajhiqmvpsd6dq")))) (build-system r-build-system) (propagated-inputs - `(("r-abind" ,r-abind) - ("r-cardata" ,r-cardata) - ("r-lme4" ,r-lme4) - ("r-maptools" ,r-maptools) - ("r-mass" ,r-mass) - ("r-mgcv" ,r-mgcv) - ("r-nlme" ,r-nlme) - ("r-nnet" ,r-nnet) - ("r-pbkrtest" ,r-pbkrtest) - ("r-quantreg" ,r-quantreg))) + (list r-abind + r-cardata + r-lme4 + r-maptools + r-mass + r-mgcv + r-nlme + r-nnet + r-pbkrtest + r-quantreg)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://r-forge.r-project.org/projects/car/") (synopsis "Companion to applied regression") (description @@ -5741,7 +5629,7 @@ even in multithreaded code, typically using OpenMP.") "03xsvsg9bqvgl98ywid3h91mmlhax5s6wvmypp3hq91vmc5kvxlp")))) (properties `((upstream-name . "tmvnsim"))) (build-system r-build-system) - (native-inputs `(("gfortran" ,gfortran))) + (native-inputs (list gfortran)) (home-page "https://www.r-project.org") (synopsis "Truncated multivariate normal simulation") (description @@ -5770,9 +5658,9 @@ normals.") "0d7ka4l4fl1wi77r2r81dc91n6cbj2xrb3lsizz5y0ziscva0sjw")))) (build-system r-build-system) (propagated-inputs - `(("r-tmvnsim" ,r-tmvnsim))) + (list r-tmvnsim)) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "http://azzalini.stat.unipd.it/SW/Pkg-mnormt") (synopsis "Multivariate normal and \"t\" distributions") (description @@ -5815,9 +5703,7 @@ first and second order derivatives.") "0sl8qzy9isy5fq8qxh1fg5285jzgy895nbgz8gdq5d0r6zdwrmmb")))) (build-system r-build-system) (propagated-inputs - `(("r-mnormt" ,r-mnormt) - ("r-numderiv" ,r-numderiv) - ("r-quantreg" ,r-quantreg))) + (list r-mnormt r-numderiv r-quantreg)) (home-page "http://azzalini.stat.unipd.it/SN") (synopsis "The skew-normal and skew-t distributions") (description @@ -5842,10 +5728,7 @@ multivariate case.") (build-system r-build-system) ;; These are all suggested packages, not build dependencies. (propagated-inputs - `(("r-cluster" ,r-cluster) - ("r-mclust" ,r-mclust) - ("r-mvtnorm" ,r-mvtnorm) - ("r-sn" ,r-sn))) + (list r-cluster r-mclust r-mvtnorm r-sn)) (home-page "https://cran.r-project.org/web/packages/tclust") (synopsis "Robust trimmed clustering") (description @@ -5867,9 +5750,7 @@ diagnostic tools (@code{ctlcurves} and @code{DiscrFact}).") "02idcc6zbdz4wsi1mcwh7qyhmlbwvnzxwkdvvppxw7n2rh54z4v0")))) (build-system r-build-system) (propagated-inputs - `(("r-rcpp" ,r-rcpp) - ("r-matrix" ,r-matrix) - ("r-rcppeigen" ,r-rcppeigen))) + (list r-rcpp r-matrix r-rcppeigen)) (home-page "https://github.com/imbs-hl/ranger") (synopsis "Fast implementation of random forests") (description @@ -5911,11 +5792,9 @@ genome-wide association studies can be analyzed efficiently.") (properties `((upstream-name . "Cairo"))) (build-system r-build-system) (inputs - `(("cairo" ,cairo) - ("libxt" ,libxt) - ("zlib" ,zlib))) + (list cairo libxt zlib)) (native-inputs - `(("pkg-config" ,pkg-config))) + (list pkg-config)) (home-page "https://www.rforge.net/Cairo/") (synopsis "R graphics device using Cairo graphics library") (description @@ -5946,10 +5825,9 @@ is supported.") "199b00cql07gf3rf4hh5ba34amnk0ai40zhx73dq1mpkn7ynxml7")))) (build-system r-build-system) (propagated-inputs - `(("r-generics" ,r-generics) - ("r-cpp11" ,r-cpp11))) + (list r-generics r-cpp11)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://cran.r-project.org/web/packages/lubridate/") (synopsis "Make dealing with dates a little easier") (description @@ -6002,12 +5880,9 @@ and the corresponding decision threshold.") "12d2nv2w15085jscgidmjdnr1ryymciflcmal6ldmgp2fkl9dyy4")))) (build-system r-build-system) (propagated-inputs - `(("r-ellipsis" ,r-ellipsis) - ("r-magrittr" ,r-magrittr) - ("r-tibble" ,r-tibble) - ("r-rlang" ,r-rlang))) + (list r-ellipsis r-magrittr r-tibble r-rlang)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://forcats.tidyverse.org") (synopsis "Tools for working with factors") (description "This package provides helpers for reordering factor @@ -6044,7 +5919,7 @@ manually \"recoding\").") "#define isnan std::isnan")) #t))))) (propagated-inputs - `(("r-rcpp" ,r-rcpp))) + (list r-rcpp)) (home-page "https://bitbucket.org/tanaylab/tgstat/") (synopsis "Tanay's group statistical utilities") (description @@ -6070,7 +5945,7 @@ tools.") "0xy6c7s7mn1yx191154bwbv1bl424bnvc80syqpl1vdl28ba46rj")))) (build-system r-build-system) (propagated-inputs - `(("r-yaml" ,r-yaml))) + (list r-yaml)) (home-page "https://bitbucket.org/tanaylab/tgconfig/") (synopsis "Infrastructure for managing package parameters") (description @@ -6095,7 +5970,7 @@ parameters.") "0qa8liylffpxgdg8xcgjar5dsvczqhn3akd4w35113hnyg1m4xyg")))) (build-system r-build-system) (propagated-inputs - `(("r-png" ,r-png))) + (list r-png)) (home-page "https://github.com/Gibbsdavidl/CatterPlots") (synopsis "Scatter plots with cat shaped points") (description "Did you ever wish you could make scatter plots with cat @@ -6157,28 +6032,27 @@ to any arbitrary string. In this case, it is up to you to set valid values.") (invoke "pytest" "-v" "rpy2/tests/" "-k" "not test_vector_complex")))))) (propagated-inputs - `(("python-cffi" ,python-cffi) - ("python-six" ,python-six) - ("python-jinja2" ,python-jinja2) - ("python-numpy" ,python-numpy) - ("python-pandas" ,python-pandas) - ("python-pytz" ,python-pytz) - ("python-ipython" ,python-ipython) - ("python-tzlocal" ,python-tzlocal))) + (list python-cffi + python-six + python-jinja2 + python-numpy + python-pandas + python-pytz + python-ipython + python-tzlocal)) (inputs - `(("readline" ,readline) - ("icu4c" ,icu4c) - ("pcre" ,pcre) - ("r-minimal" ,r-minimal) - ("r-survival" ,r-survival) - ("r-ggplot2" ,r-ggplot2) - ("r-rsqlite" ,r-rsqlite) - ("r-dplyr" ,r-dplyr) - ("r-dbplyr" ,r-dbplyr) - ("python-numpy" ,python-numpy))) + (list readline + icu4c + pcre + r-minimal + r-survival + r-ggplot2 + r-rsqlite + r-dplyr + r-dbplyr + python-numpy)) (native-inputs - `(("zlib" ,zlib) - ("python-pytest" ,python-pytest))) + (list zlib python-pytest)) (home-page "https://rpy2.github.io") (synopsis "Python interface to the R language") (description "rpy2 is a redesign and rewrite of rpy. It is providing a @@ -6215,9 +6089,9 @@ functions.") (("Scheff.+-Tukey") "Scheffe-Tukey"))) #t))))) (propagated-inputs - `(("java-jtransforms" ,java-jtransforms))) + (list java-jtransforms)) (native-inputs - `(("java-junit" ,java-junit))) + (list java-junit)) (home-page "http://jdistlib.sourceforge.net/") (synopsis "Java library of statistical distributions") (description "JDistlib is the Java Statistical Distribution Library, a @@ -6291,14 +6165,12 @@ Java package that provides routines for various statistical distributions.") (replace 'check (lambda _ (invoke "make" "test"))))))) (native-inputs - `(("perl" ,perl) - ("r-roxygen2" ,r-roxygen2) - ("texinfo" ,texinfo))) + (list perl r-roxygen2 texinfo)) (inputs `(("emacs" ,emacs-minimal) ("r-minimal" ,r-minimal))) (propagated-inputs - `(("emacs-julia-mode" ,emacs-julia-mode))) + (list emacs-julia-mode)) (home-page "https://ess.r-project.org/") (synopsis "Emacs mode for statistical analysis programs") (description @@ -6322,10 +6194,8 @@ statistical analysis programs such as R, Julia, and JAGS.") (base32 "0a4wx73jkngw5nbq1fa4jfhba6bsmyn6vnsf887x3xhb5v3ykhsg")))) (build-system emacs-build-system) (propagated-inputs - `(("emacs-ess" ,emacs-ess) - ("emacs-poly-noweb" ,emacs-poly-noweb) - ("emacs-polymode-markdown" ,emacs-polymode-markdown) - ("emacs-polymode" ,emacs-polymode))) + (list emacs-ess emacs-poly-noweb emacs-polymode-markdown + emacs-polymode)) (properties '((upstream-name . "poly-R"))) (home-page "https://github.com/polymode/poly-markdown") (synopsis "Polymodes for the R language") @@ -6349,12 +6219,9 @@ files, including Rmarkdown files.") (base32 "00sdmaq0qzp6kyv53fpfi6jf3iv4pd0ap0gmw3mbfip52bbnl55w")))) (build-system gnu-build-system) (native-inputs - `(("autoconf" ,autoconf) - ("automake" ,automake) - ("gettext" ,gnu-gettext) - ("libtool" ,libtool))) + (list autoconf automake gnu-gettext libtool)) (inputs - `(("zlib" ,zlib))) ; libz + (list zlib)) ; libz (synopsis "Convert SAS, Stata, and SPSS files") (description "Command-line tool and C library for reading files from popular stats packages like SAS, Stata and SPSS.") @@ -6375,7 +6242,7 @@ popular stats packages like SAS, Stata and SPSS.") (properties `((upstream-name . "QuantPsyc"))) (build-system r-build-system) (propagated-inputs - `(("r-boot" ,r-boot) ("r-mass" ,r-mass))) + (list r-boot r-mass)) (home-page "https://cran.r-project.org/web/packages/QuantPsyc/") (synopsis "Quantitative Psychology Tools") (description @@ -6397,8 +6264,8 @@ mediation and estimating power.") (properties `((upstream-name . "clubSandwich"))) (build-system r-build-system) (propagated-inputs - `(("r-sandwich" ,r-sandwich))) - (native-inputs `(("r-knitr" ,r-knitr))) + (list r-sandwich)) + (native-inputs (list r-knitr)) (home-page "https://github.com/jepusto/clubSandwich") (synopsis "Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections") @@ -6435,10 +6302,7 @@ Methods are provided for a variety of fitted models, including @code{lm()} and (properties `((upstream-name . "puniform"))) (build-system r-build-system) (propagated-inputs - `(("r-adgoftest" ,r-adgoftest) - ("r-metafor" ,r-metafor) - ("r-rcpp" ,r-rcpp) - ("r-rcpparmadillo" ,r-rcpparmadillo))) + (list r-adgoftest r-metafor r-rcpp r-rcpparmadillo)) (home-page "https://github.com/RobbievanAert/puniform") (synopsis @@ -6528,7 +6392,7 @@ or eta squared effect size.") (properties `((upstream-name . "kknn"))) (build-system r-build-system) (propagated-inputs - `(("r-igraph" ,r-igraph) ("r-matrix" ,r-matrix))) + (list r-igraph r-matrix)) (home-page "https://github.com/KlausVigo/kknn") (synopsis "Weighted k-Nearest Neighbors") (description @@ -6548,7 +6412,7 @@ or eta squared effect size.") "12hkdi77vkic05p2vhap025xdcg1n53ywm239v18713pihdlj63l")))) (properties `((upstream-name . "logspline"))) (build-system r-build-system) - (native-inputs `(("gfortran" ,gfortran))) + (native-inputs (list gfortran)) (home-page "https://cran.r-project.org/web/packages/logspline/") (synopsis @@ -6575,17 +6439,16 @@ interface). The recommended routine @code{logspline()} uses an algorithm from (properties `((upstream-name . "effects"))) (build-system r-build-system) (propagated-inputs - `(("r-cardata" ,r-cardata) - ("r-colorspace" ,r-colorspace) - ("r-estimability" ,r-estimability) - ("r-insight" ,r-insight) - ("r-lattice" ,r-lattice) - ("r-lme4" ,r-lme4) - ("r-nnet" ,r-nnet) - ("r-survey" ,r-survey))) + (list r-cardata + r-colorspace + r-estimability + r-insight + r-lattice + r-lme4 + r-nnet + r-survey)) (native-inputs - `(("r-knitr" ,r-knitr) - ("r-car", r-car))) + (list r-knitr r-car)) (home-page "https://www.r-project.org") (synopsis "Effect Displays for Linear, Generalized Linear, and Other Models") @@ -6608,17 +6471,17 @@ various statistical models with linear predictors.") (properties `((upstream-name . "BayesFactor"))) (build-system r-build-system) (propagated-inputs - `(("r-coda" ,r-coda) - ("r-gtools" ,r-gtools) - ("r-hypergeo" ,r-hypergeo) - ("r-matrix" ,r-matrix) - ("r-matrixmodels" ,r-matrixmodels) - ("r-mvtnorm" ,r-mvtnorm) - ("r-pbapply" ,r-pbapply) - ("r-rcpp" ,r-rcpp) - ("r-rcppeigen" ,r-rcppeigen) - ("r-stringr" ,r-stringr))) - (native-inputs `(("r-knitr" ,r-knitr))) + (list r-coda + r-gtools + r-hypergeo + r-matrix + r-matrixmodels + r-mvtnorm + r-pbapply + r-rcpp + r-rcppeigen + r-stringr)) + (native-inputs (list r-knitr)) (home-page "https://richarddmorey.github.io/BayesFactor/") (synopsis @@ -6641,7 +6504,7 @@ designs, one-way designs, general ANOVA designs, and linear regression.") "01j1h412yfjx5r4dd0w8rhlf55997spgb6zd6pawy19rgw0byp1h")))) (build-system r-build-system) (native-inputs - `(("gfortran" ,gfortran))) + (list gfortran)) (home-page "https://cran.r-project.org/web/packages/norm/") (synopsis "Analysis of multivariate normal datasets with missing values") (description "Multiple imputation of multivariate continuous data under a @@ -6661,21 +6524,21 @@ normal model.") "0l3l2x85v3srilww483kpgp4zlwixyml257b0cqly8kcpwawlinm")))) (build-system r-build-system) (propagated-inputs - `(("r-dplyr" ,r-dplyr) - ("r-norm" ,r-norm) - ("r-forcats" ,r-forcats) - ("r-ggplot2" ,r-ggplot2) - ("r-glue" ,r-glue) - ("r-magrittr" ,r-magrittr) - ("r-purrr" ,r-purrr) - ("r-rlang" ,r-rlang) - ("r-tibble" ,r-tibble) - ("r-tidyr" ,r-tidyr) - ("r-upsetr" ,r-upsetr) - ("r-viridis" ,r-viridis) - ("r-visdat" ,r-visdat))) + (list r-dplyr + r-norm + r-forcats + r-ggplot2 + r-glue + r-magrittr + r-purrr + r-rlang + r-tibble + r-tidyr + r-upsetr + r-viridis + r-visdat)) (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/njtierney/naniar") (synopsis "Data structures, summaries, and visualisations for missing data") @@ -6724,7 +6587,7 @@ Michael Lim & Trevor Hastie (2015)") "1w1yhwwrmh95bklacz44wjwynxd8cj3z8b9zvsnzmk18m5a4k0fl")))) (properties `((upstream-name . "datasauRus"))) (build-system r-build-system) - (native-inputs `(("r-knitr" ,r-knitr))) + (native-inputs (list r-knitr)) (home-page "https://github.com/lockedata/datasauRus") (synopsis "Datasets from the Datasaurus Dozen") @@ -6755,7 +6618,7 @@ Annealing\" @url{doi:10.1145/3025453.3025912}.") (base32 "1lnj41gynaar5isyijg5nbll64qdxa12dnqvz7lxhaclqcjskqna")))) (properties `((upstream-name . "lmom"))) (build-system r-build-system) - (native-inputs `(("gfortran" ,gfortran))) + (native-inputs (list gfortran)) (home-page "https://cran.r-project.org/package=lmom") (synopsis "L-Moments for R") (description @@ -6777,7 +6640,7 @@ extreme-value distribution.") (base32 "1wrw7i5bq7rb2ahadm57y9fmr697r7lp9ln7ajcd592b0nn60n4i")))) (properties `((upstream-name . "gld"))) (build-system r-build-system) - (propagated-inputs `(("r-e1071" ,r-e1071) ("r-lmom" ,r-lmom))) + (propagated-inputs (list r-e1071 r-lmom)) (home-page "https://cran.r-project.org/package=gld") (synopsis @@ -6810,7 +6673,7 @@ L-Moments and Distributional Least Absolutes.") (base32 "0acm01njg3arlzwknv5v1sdsz5ab0bdh04sn1bmf91hcg3li8qd7")))) (properties `((upstream-name . "Exact"))) (build-system r-build-system) - (propagated-inputs `(("r-rootsolve" ,r-rootsolve))) + (propagated-inputs (list r-rootsolve)) (home-page "https://cran.r-project.org/package=Exact") (synopsis "Unconditional Exact Test") (description @@ -6840,17 +6703,17 @@ Calculates confidence intervals for the difference in proportion.") (properties `((upstream-name . "DescTools"))) (build-system r-build-system) (propagated-inputs - `(("r-bh" ,r-bh) - ("r-boot" ,r-boot) - ("r-data-table" ,r-data-table) - ("r-exact" ,r-exact) - ("r-expm" ,r-expm) - ("r-gld" ,r-gld) - ("r-mass" ,r-mass) - ("r-mvtnorm" ,r-mvtnorm) - ("r-rcpp" ,r-rcpp) - ("r-rstudioapi" ,r-rstudioapi))) - (native-inputs `(("gfortran" ,gfortran))) + (list r-bh + r-boot + r-data-table + r-exact + r-expm + r-gld + r-mass + r-mvtnorm + r-rcpp + r-rstudioapi)) + (native-inputs (list gfortran)) (home-page "https://andrisignorell.github.io/DescTools/") (synopsis "Tools for Descriptive Statistics") (description @@ -6900,15 +6763,15 @@ from contributed R packages as well.") (with-output-to-file "exit.lsp" (lambda () (display "(exit)"))) (invoke "./xlisp" "tests/test" "exit"))))))) - (inputs `(("tcsh" ,tcsh) - ("libx11" ,libx11) - ("libxmu" ,libxmu) - ("libxext" ,libxext) - ("libxpm" ,libxpm) - ("libxaw" ,libxaw) - ("ncurses" ,ncurses) - ("gnuplot" ,gnuplot))) - (native-inputs `(("pkg-config" ,pkg-config))) + (inputs (list tcsh + libx11 + libxmu + libxext + libxpm + libxaw + ncurses + gnuplot)) + (native-inputs (list pkg-config)) (synopsis "Statistical analysis environment with interactive graphics") (description "XLISP-STAT is a statistical environment based on a Lisp dialect called XLISP. To facilitate statistical computations, standard |