diff options
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 84 |
1 files changed, 44 insertions, 40 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index e017d60767..6face9910a 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -548,14 +548,14 @@ also flexible enough to handle most nonstandard requirements.") (define-public r-matrix (package (name "r-matrix") - (version "1.2-15") + (version "1.2-16") (source (origin (method url-fetch) (uri (cran-uri "Matrix" version)) (sha256 (base32 - "1mshhyia6imh939p8labxi0wv21lal7csmccxi42klpgdh1j89kv")))) + "10fh0y1wd0bvnqbzlyck08pn1vxcd58bskx2lrf9m42v5792ba9p")))) (properties `((upstream-name . "Matrix"))) (build-system r-build-system) (propagated-inputs @@ -593,14 +593,14 @@ nonlinear mixed-effects models.") (define-public r-mgcv (package (name "r-mgcv") - (version "1.8-27") + (version "1.8-28") (source (origin (method url-fetch) (uri (cran-uri "mgcv" version)) (sha256 (base32 - "06vx1z52gcdmji0phmphfa0sg62gwxkw590prplxgv4da7xrk2y8")))) + "1snkpnkkigwrj9zm31j1nlivv9ls56imz263cv167hnmghiahpmm")))) (build-system r-build-system) (propagated-inputs `(("r-matrix" ,r-matrix) @@ -916,14 +916,14 @@ Munsell colour system.") (define-public r-permute (package (name "r-permute") - (version "0.9-4") + (version "0.9-5") (source (origin (method url-fetch) (uri (cran-uri "permute" version)) (sha256 (base32 - "1w8wzk1fg9q7wvisnfp2js70dg0m9wi12gkdhpyngpbdcgssahd5")))) + "0ra8p5mf2590azrkas8z2ry7mif77xqxd29n4zgyi5vll225726j")))) (build-system r-build-system) ;; Tests do not run correctly, but running them properly would entail a ;; circular dependency with vegan. @@ -1021,14 +1021,14 @@ solution for sending email, including attachments, from within R.") (define-public r-stringi (package (name "r-stringi") - (version "1.3.1") + (version "1.4.3") (source (origin (method url-fetch) (uri (cran-uri "stringi" version)) (sha256 (base32 - "0qn3xy6vnz11vv2prbm55vkbgxr6dl8w5vk5q8d7wlp9nqxndprj")))) + "1vbr6g9p1iyzdj7wfw6afyizvnd1a2srfvkl72pq23vhdcwwpkhk")))) (build-system r-build-system) (inputs `(("icu4c" ,icu4c))) (native-inputs `(("pkg-config" ,pkg-config))) @@ -1234,13 +1234,13 @@ considerably faster, produces smaller files, and leaves text as is.") (define-public r-assertthat (package (name "r-assertthat") - (version "0.2.0") + (version "0.2.1") (source (origin (method url-fetch) (uri (cran-uri "assertthat" version)) (sha256 (base32 - "1wp5znk3xy338x6hknppk702jn596yr735d9i7c3wabm3sdzfgnp")))) + "17wy5bdfzg73sg2clisg1k3zyn1adkj59x56m5nwia2k8z67zkw5")))) (build-system r-build-system) (home-page "https://github.com/hadley/assertthat") (synopsis "Easy pre and post assertions") @@ -1254,13 +1254,13 @@ wrong.") (define-public r-lazyeval (package (name "r-lazyeval") - (version "0.2.1") + (version "0.2.2") (source (origin (method url-fetch) (uri (cran-uri "lazyeval" version)) (sha256 (base32 - "0q9zx78ncy2ffzrf9sh053069kd3w1xn1ss3gsbyf3y4jhza9cw3")))) + "1m10i059csrcqkcn59a8wspn784alxsq3symzhn24mhhl894346n")))) (build-system r-build-system) (home-page "https://github.com/hadley/lazyeval") (synopsis "Lazy (non-standard) evaluation in R") @@ -1350,13 +1350,13 @@ There is also a Shiny app as a user interface in this package.") (define-public r-highr (package (name "r-highr") - (version "0.7") + (version "0.8") (source (origin (method url-fetch) (uri (cran-uri "highr" version)) (sha256 (base32 - "1dzknqk4x7iiiq1jkh9bqm5qcvs7mbqxbkn5955050payavabfya")))) + "0my6idnhmmgs4q1vs40y2lh56yij2p59mpwvm53wjs2zk6x1zl2b")))) (build-system r-build-system) (home-page "https://github.com/yihui/highr") (synopsis "Syntax highlighting for R source code") @@ -1431,13 +1431,13 @@ emitter (http://pyyaml.org/wiki/LibYAML) for R.") (define-public r-knitr (package (name "r-knitr") - (version "1.21") + (version "1.22") (source (origin (method url-fetch) (uri (cran-uri "knitr" version)) (sha256 (base32 - "0xzymi4gkilqaa5b2ay9zk1advavzkwxf7mb064bqfb09y8rak0j")))) + "1iks80g1cj25rvgyf0y2jc2pmfvsq4sbgdp788w9016bk71wzdcs")))) (build-system r-build-system) (propagated-inputs `(("r-evaluate" ,r-evaluate) @@ -1635,13 +1635,13 @@ defined in different packages.") (define-public r-rlang (package (name "r-rlang") - (version "0.3.1") + (version "0.3.2") (source (origin (method url-fetch) (uri (cran-uri "rlang" version)) (sha256 (base32 - "0lbi66bavca866k26dnpkxj3l106xr4a6khcsfn8i3i8w8mpnhih")))) + "13s8dh7nryjacp9jpi092icxf5ffkp16qxv59m923g5nkf8f03hi")))) (build-system r-build-system) (home-page "http://rlang.tidyverse.org") (synopsis "Functions for base types, core R and Tidyverse features") @@ -1653,14 +1653,14 @@ like tidy evaluation.") (define-public r-tibble (package (name "r-tibble") - (version "2.0.1") + (version "2.1.1") (source (origin (method url-fetch) (uri (cran-uri "tibble" version)) (sha256 (base32 - "04rxf5x9awwa9c00v9p7d3a2lqnn7j2rjg4r219hmw7cbqlwrcks")))) + "111jl0hdjhh7hkydxvsr5l19gb0ylxq7xrkc28awnc9pzglpgis5")))) (build-system r-build-system) (propagated-inputs `(("r-cli" ,r-cli) @@ -2375,13 +2375,13 @@ functions make it easy to control additional request components.") (define-public r-git2r (package (name "r-git2r") - (version "0.24.0") + (version "0.25.2") (source (origin (method url-fetch) (uri (cran-uri "git2r" version)) (sha256 (base32 - "0vfc25z4j53pc49cnp3zjwzjb72kvc0aq96wgyg10xpgvhl3z0gg")))) + "15kpvz6ry2r8ii5hzinjwkggc5kgmkbcpsdwzahsf8gha52w80p0")))) (build-system r-build-system) ;; This R package contains modified sources of libgit2. This modified ;; version of libgit2 is built as the package is built. Hence libgit2 is @@ -2403,13 +2403,13 @@ pure C implementation of the Git core methods.") (define-public r-rstudioapi (package (name "r-rstudioapi") - (version "0.9.0") + (version "0.10") (source (origin (method url-fetch) (uri (cran-uri "rstudioapi" version)) (sha256 (base32 - "0gn1pvaxfh2gh2ikvxcr8f6k97ygcfr68iz6dhwlq4z71a1s4jai")))) + "15mbw607ncdf53mgga76n3va5zzdcjqz14nb0jcn9axwccqamic0")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/rstudioapi") (synopsis "Safely access the RStudio API") @@ -2580,17 +2580,21 @@ well as additional utilities such as panel and axis annotation functions.") (define-public r-rcpparmadillo (package (name "r-rcpparmadillo") - (version "0.9.200.7.0") + (version "0.9.200.7.1") (source (origin (method url-fetch) (uri (cran-uri "RcppArmadillo" version)) (sha256 (base32 - "11m04yvdh6086567dzzxchbf68fl5hxf2y32acf3f43bjqgwbv2p")))) + "1gy3ywzw1cx344a8xihnmflgxphy2fhci7ng85msqd1iv9gzxyk4")))) (properties `((upstream-name . "RcppArmadillo"))) (build-system r-build-system) + ;; All needed for vignettes (native-inputs - `(("r-knitr" ,r-knitr))) ; needed for vignettes + `(("r-knitr" ,r-knitr) + ("r-rmarkdown" ,r-rmarkdown) + ("ghc-pandoc" ,ghc-pandoc) + ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc))) (propagated-inputs `(("r-rcpp" ,r-rcpp))) (home-page "https://github.com/RcppCore/RcppArmadillo") @@ -2674,14 +2678,14 @@ certain criterion, e.g., it contains a certain regular file.") (define-public r-rmarkdown (package (name "r-rmarkdown") - (version "1.11") + (version "1.12") (source (origin (method url-fetch) (uri (cran-uri "rmarkdown" version)) (sha256 (base32 - "0yyjbh891mdqzpjkblz8510ng71i7mxmyiqr69x3rwlwk2vakk79")))) + "0milpdaf4nd36kq6sci9wc5dhwswl4w9c9fychfbppgjsgfp6kfv")))) (properties `((upstream-name . "rmarkdown"))) (build-system r-build-system) (propagated-inputs @@ -3343,14 +3347,14 @@ Stochastic Neighbor Embedding using a Barnes-Hut implementation.") (define-public r-e1071 (package (name "r-e1071") - (version "1.7-0.1") + (version "1.7-1") (source (origin (method url-fetch) (uri (cran-uri "e1071" version)) (sha256 (base32 - "11fqm4shmksalkazcwvzfknp3amigw7fr8wdwanqa5v5kx7ihyq9")))) + "1zlxz3da216q6v6r4ff60il121xwz7g7m639vzdwglhw3jjh8psw")))) (build-system r-build-system) (propagated-inputs `(("r-class" ,r-class))) @@ -3778,14 +3782,14 @@ It uses and relies on grid graphics and formal (S4) classes and methods.") (define-public r-purrr (package (name "r-purrr") - (version "0.3.1") + (version "0.3.2") (source (origin (method url-fetch) (uri (cran-uri "purrr" version)) (sha256 (base32 - "0fw8nyrwf009fpj3457binw5s02si226yrvn96hdivwj268ck8y2")))) + "0ccs78a2ylr60f3z0f7iywi8h1pwr8mz4ga78bs4pwgnwkclvir7")))) (build-system r-build-system) (propagated-inputs `(("r-magrittr" ,r-magrittr) @@ -4292,13 +4296,13 @@ mechanism.") (define-public r-zoo (package (name "r-zoo") - (version "1.8-4") + (version "1.8-5") (source (origin (method url-fetch) (uri (cran-uri "zoo" version)) (sha256 (base32 - "1pywcp86kqijdrvl42qwdy75szrag9pzj0p88zbrj2r1klb8rn5i")))) + "09p8gmd5ifz80ahnhiianarsr5xx3nz76jzp90d7v3fjffcrcww7")))) (build-system r-build-system) (propagated-inputs `(("r-lattice" ,r-lattice))) @@ -4726,14 +4730,14 @@ models, generalized linear models and model-based clustering.") (define-public r-mclust (package (name "r-mclust") - (version "5.4.2") + (version "5.4.3") (source (origin (method url-fetch) (uri (cran-uri "mclust" version)) (sha256 (base32 - "09152swfpa3fzhmrq5cwb5kxgvrxvigv1m4v6rhcibrdhfd1x8x4")))) + "18x5ych9zi3y87rxi4pf6f23sl2918dp9xxpw1pqa7p7drw817p6")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) @@ -4796,16 +4800,16 @@ can be efficiently implemented directly in the R language.") (define-public r-robustbase (package (name "r-robustbase") - (version "0.93-3") + (version "0.93-4") (source (origin (method url-fetch) (uri (cran-uri "robustbase" version)) (sha256 (base32 - "1nqh1qg1qd1qrxl1w585dqx7ql55qzjny1r4f9hqxpwd7lml07cc")))) + "1q56y0iqp7qhavm4xnpzhs64q7l893y7yiq3b20fllpghka077pa")))) (build-system r-build-system) - (inputs + (native-inputs `(("gfortran" ,gfortran))) (propagated-inputs `(("r-deoptimr" ,r-deoptimr))) |