diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 6709987658..7a69a5e43d 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -13910,6 +13910,34 @@ mappings functionalities.") information networks from data.") (license license:artistic2.0))) +(define-public r-genetclassifier + (package + (name "r-genetclassifier") + (version "1.32.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "geNetClassifier" version)) + (sha256 + (base32 + "1i1cavbbvxzqgqxfmikghnls18jrq12hb953mjrwa95lkhzdxm2d")))) + (properties + `((upstream-name . "geNetClassifier"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-e1071" ,r-e1071) + ("r-ebarrays" ,r-ebarrays) + ("r-minet" ,r-minet))) + (home-page "https://www.cicancer.org") + (synopsis "Classify diseases and build gene networks using expression profiles") + (description + "This is a comprehensive package to automatically train and validate a +multi-class SVM classifier based on gene expression data. It provides +transparent selection of gene markers, their coexpression networks, and an +interface to query the classifier.") + (license license:gpl2+))) + (define-public r-tximeta (package (name "r-tximeta") |