diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 8be8976a15..b8676b0ece 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1138,6 +1138,37 @@ protocol. It provides a simple and reliable way to retrieve genomic data from servers supporting the protocol.") (license license:asl2.0))) +(define-public python-pegasusio + (package + (name "python-pegasusio") + (version "0.7.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "pegasusio" version)) + (sha256 + (base32 + "0gqygspdy398vjymdy6756jmk99s7fhwav9rivdx59kpqjcdxaz9")))) + (build-system pyproject-build-system) + (propagated-inputs + (list python-anndata + python-docopt + python-h5py + python-importlib-metadata + python-loompy + python-natsort + python-numpy + python-pandas + python-pillow + python-scipy + python-zarr)) + (native-inputs (list python-cython python-setuptools-scm)) + (home-page "https://github.com/lilab-bcb/pegasusio") + (synopsis "Read or write single-cell genomics data") + (description + "Pegasusio is a Python package for reading or writing single-cell +genomics data.") + (license license:bsd-3))) + (define-public python-phylophlan (package (name "python-phylophlan") |