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2015-11-22doc: Mention 'guix environment guix'.Ludovic Courtès
* doc/contributing.texi (Building from Git): Mention 'guix environment guix'. Remove outdated description of ./bootstrap. Clarify a few things.
2015-11-21environment: Correctly handle abnormal exits.Ludovic Courtès
Fixes <http://bugs.gnu.org/21958>. * guix/scripts/environment.scm (status->exit-code): New procedure. (exit/status, primitive-exit/status): Use it. * tests/guix-environment-container.sh: Add test.
2015-11-21tests: Skip 'guix-container-environment.sh' when support is missing.Ludovic Courtès
Fixes <http://bugs.gnu.org/21410>. Reported by Alex Vong <alexvong1995@gmail.com>. * tests/guix-environment-container.sh: Exit with 77 when '((@@ (guix scripts environment) assert-container-features))' fails.
2015-11-21doc: Remove extraneous "See."Ludovic Courtès
* doc/contributing.texi (Building from Git): Remove extra "See" and use @xref instead of @pxref.
2015-11-21gnu: tig: Update to 2.1.1.Efraim Flashner
* gnu/packages/version-control.scm (tig): Update to 2.1.1.
2015-11-21gnu: cvs: Use external zlib.Efraim Flashner
* gnu/packages/version-control.scm (cvs)[arguments]: add configure flag --with-exernal-zlib.
2015-11-21gnu: nano: Update to 2.4.3.Efraim Flashner
* gnu/packages/nano.scm (nano): Update to 2.4.3.
2015-11-21refresh: Rewrite '--list-dependent' in terms of (guix graph).Ludovic Courtès
* guix/scripts/refresh.scm (all-packages, list-dependents): New procedures. (guix-refresh): Use it.
2015-11-21graph: Add procedures to query a node's edges.Ludovic Courtès
* guix/graph.scm (%node-edges, node-edges, node-back-edges) (node-transitive-edges): New procedures. * tests/graph.scm ("node-edges") ("node-transitive-edges + node-back-edges"): New tests.
2015-11-21Add (guix graph).Ludovic Courtès
* guix/scripts/graph.scm (<node-type>, <graph-backend>, emit-prologue) (emit-epilogue, emit-node, emit-edge, %graphviz-backend, export-graph): Move to... * guix/graph.scm: ... here. New file. * guix/scripts/system.scm, tests/graph.scm: Use it. * Makefile.am (MODULES): Add it.
2015-11-21gnu: parted: Update to 3.2.Mathieu Lirzin
* gnu/packages/disk.scm (parted): Update to 3.2. [inputs]: Add lvm2 and remove check. Replace readline-6.2 with its latest version. [native-inputs]: Add perl and python for the tests. [arguments]: Use `modify-phases' and adapt to the new tests. [home-page]: Use https.
2015-11-21gnu: Add qemu-minimal.Ludovic Courtès
* gnu/packages/qemu.scm (qemu): Exchange with former QEMU-HEADLESS. (qemu-headless): Rename to... (qemu-minimal): ... this. New variable. Pass --target-list. * gnu/packages/debug.scm (qemu-2.3.0): Inherit from QEMU-MINIMAL. * gnu/packages/grub.scm (qemu-for-tests): Likewise. * gnu/system/vm.scm (expression->derivation-in-linux-vm, qemu-image): Update to name change.
2015-11-21doc: Fix 'geiser-guile-load-path' example.Alex Kost
Reported by marusich on #guix. * doc/contributing.texi (The Perfect Setup): Wrap modifying 'geiser-guile-load-path' into 'with-eval-after-load'.
2015-11-20gnu: Add Synfig Studio.Ricardo Wurmus
* gnu/packages/animation.scm (synfigstudio): New variable.
2015-11-20gnu: Add Synfig.Ricardo Wurmus
* gnu/packages/animation.scm (synfig): New variable. * gnu/packages/patches/synfig-build-fix.patch: New file. * gnu-system.am (dist_patch_DATA): Add it.
2015-11-20gnu: Add ETL.Ricardo Wurmus
* gnu/packages/animation.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-11-20gnu: Add MLT.Ricardo Wurmus
* gnu/packages/video.scm (mlt): New variable.
2015-11-20gnu: Add libxml++.Ricardo Wurmus
* gnu/packages/gnome.scm (libxml++): New variable.
2015-11-20gnu: slepc: Update to 3.6.2.Eric Bavier
* gnu/packages/maths.scm (slepc): Update to 3.6.2. [arguments]: Append "/lib" to arpack configure flag. Use 'inputs' rather than '%build-inputs' in 'configure phase.
2015-11-20gnu: petsc: Update to 3.6.2.Eric Bavier
* gnu/packages/maths.scm (petsc): Update to 3.6.2.
2015-11-20gnu: mumps: Update to 5.0.1.Eric Bavier
* gnu/packages/maths.scm (mumps): Update to 5.0.1.
2015-11-20gnu: openmpi: Update to 1.10.1.Eric Bavier
* gnu/packages/mpi.scm (openmpi): Update to 1.10.1. [arguments]: Remove now-unsupported configure flags. Add --enable-builtin-atomics. Remove development-oriented --enable-debug.
2015-11-20gnu: hwloc: Update to 1.11.1.Eric Bavier
* gnu/packages/mpi.scm (hwloc): Update to 1.11.1. [source]: Remove patch. * gnu/packages/patches/hwloc-gather-topology-lstopo.patch: Delete it. * gnu-system.am (dist_patch_DATA): Remove it.
2015-11-20gnu: guitarix: Update to 0.34.0.Ricardo Wurmus
* gnu/packages/audio.scm (guitarix): Update to 0.34.0. [source]: Remove patch. [inputs]: Add webkitgtk/gtk+-2. * gnu/packages/patches/guitarix-c++11: Remove file. * gnu-system.am (dist_patch_DATA): Remove it.
2015-11-20gnu: services: Fix typo in gpm-dmd-service.David Thompson
* gnu/services/base.scm (gpm-dmd-service): s/dmd/gpm/
2015-11-20gnu: Add emulation-station.David Thompson
* gnu/packages/games.scm (emulation-station): New variable.
2015-11-20gnu: preseq: Update to 2.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (preseq): Update to 2.0. [source]: Add file-name field, remove patches. [arguments]: Remove unused build phases, add make flags. [inputs]: Add smithlab-cpp. * gnu/packages/patches/preseq-1.0.2-link-with-libbam.patch: Remove file. * gnu/packages/patches/preseq-1.0.2-install-to-PREFIX.patch: Remove file. * gnu-system.am (dist_patch_DATA): Remove them.
2015-11-20gnu: Add smithlab-cpp.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (smithlab-cpp): New variable.
2015-11-20gnu: edirect: Update home page.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (edirect)[home-page]: Append trailing slash to home page.
2015-11-20gnu: sra-tools: Update to 2.5.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (sra-tools): Update to 2.5.4.
2015-11-20gnu: ncbi-vdb: Update to 2.5.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ncbi-vdb): Update to 2.5.4.
2015-11-20gnu: ngs-java: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ngs-java): Update to 1.2.2. [arguments]: Remove build phase "fix-java-symlink-installation".
2015-11-20gnu: ngs-sdk: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ngs-sdk): Update to 1.2.2.
2015-11-20gnu: Add ruby-net-ssh.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-net-ssh): New variable.
2015-11-20gnu: Add ruby-mocha.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-mocha): New variable.
2015-11-20gnu: Add ruby-redcarpet.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-redcarpet): New variable.
2015-11-20gnu: Add ruby-introspection.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-introspection): New variable.
2015-11-20gnu: Add ruby-instantiator.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-instantiator): New variable.
2015-11-20gnu: Add ruby-blankslate.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-blankslate): New variable.
2015-11-20gnu: Add ruby-metaclass.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-metaclass): New variable.
2015-11-20gnu: Add ruby-test-unit.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-test-unit): New variable.
2015-11-20gnu: Add ruby-packnga.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-packnga): New variable.
2015-11-20gnu: Add ruby-gettext.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-gettext): New variable.
2015-11-20gnu: Add ruby-text.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-text): New variable.
2015-11-20gnu: Add ruby-locale.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-locale): New variable.
2015-11-20gnu: Add ruby-power-assert.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-power-assert): New variable.
2015-11-20gnu: bless: Build only for x86_64.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bless): Add supported-systems field.
2015-11-20gnu: htseq: Propagate numpy.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (htseq)[inputs]: Move python2-numpy from here ... [propagated-inputs]: ... to here.
2015-11-20gnu: ant: Update to 1.9.6.Ricardo Wurmus
* gnu/packages/java.scm (ant): Update to 1.9.6.
2015-11-19gnu: guix: Update development snapshot to 5c36edc.Ludovic Courtès
* gnu/packages/package-management.scm (guix-devel): Update to 5c36edc.
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