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2019-08-29gnu: python-alembic: Update to 1.0.11.Marius Bakke
* gnu/packages/databases.scm (python-alembic): Update to 1.0.11.
2019-08-29gnu: Add rust-nodrop, rust-nodrop-union.Efraim Flashner
* gnu/packages/crates-io.scm (rust-nodrop, rust-nodrop-union): New variables.
2019-08-29gnu: Add rust-num-iter.Efraim Flashner
* gnu/packages/crates-io.scm (rust-num-iter): New variable.
2019-08-29gnu: Add rust-futures-cpupool.Efraim Flashner
* gnu/packages/crates-io.scm (rust-futures-cpupool): New variable.
2019-08-29gnu: Add rust-fuchsia-cprng.Efraim Flashner
* gnu/packages/crates-io.scm (rust-fuchsia-cprng): New variable.
2019-08-29gnu: Add rust-fucshia-zircon.Efraim Flashner
* gnu/packages/crates-io.scm (rust-fuchsia-zircon): New variable.
2019-08-29gnu: Add rust-fuchsia-zircon-sys.Efraim Flashner
* gnu/packages/crates-io.scm (rust-fuchsia-zircon-sys): New variable.
2019-08-29gnu: Add rust-clicolors-control.Efraim Flashner
* gnu/packages/crates-io.scm (rust-clicolors-control): New variable.
2019-08-29gnu: Add rust-atty.Efraim Flashner
* gnu/packages/crates-io.scm (rust-atty): New variable.
2019-08-29gnu: Add rust-ws2-32-sys.Efraim Flashner
* gnu/packages/cargo-io.scm (rust-ws2-32-sys): New variable.
2019-08-29gnu: Add rust-kernel32-sys.Efraim Flashner
* gnu/packages/crates-io.scm (rust-kernel32-sys): New variable.
2019-08-29gnu: Add rust-heapsize.Efraim Flashner
* gnu/packages/crates-io.scm (rust-heapsize): New variable.
2019-08-29gnu: Add rust-resolv-conf.Efraim Flashner
* gnu/packages/crates-io.scm (rust-resolv-conf): New variable.
2019-08-29gnu: Add rust-hostname.Efraim Flashner
* gnu/packages/crates-io.scm (rust-hostname): New variable.
2019-08-29gnu: Add rust-winutil.Efraim Flashner
* gnu/packages/crates-io.scm (rust-winutil): New variable.
2019-08-29gnu: rust-winapi: Update to 0.3.8.Efraim Flashner
* gnu/packages/crates-io.scm (rust-winapi): Update to 0.3.8.
2019-08-29gnu: Add rust-plugin.Efraim Flashner
* gnu/packages/crates-io.scm (rust-plugin): New variable.
2019-08-29gnu: Add rust-typemap.Efraim Flashner
* gnu/packages/crates-io.scm (rust-typemap): New variable.
2019-08-29gnu: Add rust-unsafe-any.Efraim Flashner
* gnu/packages/crates-io.scm (rust-unsafe-any): New variable.
2019-08-29gnu: Add rust-mime.Efraim Flashner
* gnu/packages/crates-io.scm (rust-mime): New variable.
2019-08-29gnu: Add rust-unicase.Efraim Flashner
* gnu/packages/crates-io.scm (rust-unicase): New variable.
2019-08-29gnu: Add rust-version-check-0.1.Efraim Flashner
* gnu/packages/crates-io.scm (rust-version-check-0.1): New variable.
2019-08-29gnu: Add rust-remove-dir-all.Efraim Flashner
* gnu/packages/crates-io.scm (rust-remove-dir-all): New variable.
2019-08-29doc: Do not refer to Bioconductor SVN.Ricardo Wurmus
* doc/guix.texi (Invoking guix import): Do not mention the now defunct Bioconductor SVN repository.
2019-08-29gnu: Add r-harmony.Ricardo Wurmus
* gnu/packages/cran.scm (r-harmony): New variable.
2019-08-29import: cran: Add support for git repositories.Ricardo Wurmus
* guix/import/cran.scm (vcs-file?): New procedure. (download): Support downloading from git. (fetch-description): Add a clause for the 'git repository type. (files-match-pattern?): New procedure. (tarball-files-match-pattern?): Implement in terms of FILES-MATCH-PATTERN?. (directory-needs-fortran?, directory-needs-zlib?, directory-needs-pkg-config?): New procedures. (needs-fortran?, needs-zlib?, needs-pkg-config?): Rename these procedures... (tarball-needs-fortran?, tarball-needs-zlib?, tarball-needs-pkg-config?): ...to this, and use them. (file-hash): New procedure. (description->package): Handle the 'git repository type. * guix/import/utils.scm (package->definition): Handle package expression inside of a let. * guix/scripts/import.scm (guix-import): Handle let expressions. * doc/guix.texi (Invoking guix import): Document it.
2019-08-29gnu: nano: Update to 4.4.Efraim Flashner
* gnu/packages/nano.scm (nano): Update to 4.4.
2019-08-29gnu: stow: Update to 2.3.1.Efraim Flashner
* gnu/packages/package-management.scm (stow): Update to 2.3.1. [inputs]: Remove perl-clone, perl-clone-choose, perl-hash-merge. [arguments]: Remove custom 'wrap-stow phase.
2019-08-29gnu: gnuastro: Update to 0.10.Efraim Flashner
* gnu/packages/astronomy.scm (gnuastro): Update to 0.10.
2019-08-29services: cuirass: Log web interface to separate file.Ricardo Wurmus
* gnu/services/cuirass.scm (<cuirass-configuration>): Add web-log-file field. (cuirass-shepherd-service): Read it and use it. * doc/guix.texi (Continuous Integration): Document it.
2019-08-29import: cran: guix-import-cran: Use (guix import utils).Ricardo Wurmus
* guix/scripts/import/cran.scm (guix-import-cran): Use PACKAGE->DEFINITION from (guix import utils) instead of custom procedure.
2019-08-28gnu: Dovecot: Update to 2.3.7.2 [fixes CVE-2019-11500].Leo Famulari
* gnu/packages/mail.scm (dovecot): Update to 2.3.7.2.
2019-08-28deploy: Do not quote error messages.Ludovic Courtès
* guix/scripts/deploy.scm (guix-deploy): Do not quote the message.
2019-08-28remote, ssh: Show the command exit status upon failure.Ludovic Courtès
* guix/remote.scm (remote-pipe-for-gexp): Show the exit status in error message. * guix/ssh.scm (remote-inferior): Likewise.
2019-08-28gnu: emacs-evil-owl: Update to 0.0.1-2.e8fe5b2.Brian Leung
* gnu/packages/emacs-xyz.scm (emacs-evil-owl): Update to 0.0.1-2.e8fe5b2. [inputs]: Remove emacs-posframe, which is now an optional dependency. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-08-28diagnostics: Avoid highlighting complete messages.Ludovic Courtès
* guix/diagnostics.scm (%highlight-argument): Don't highlight ARG if it contains white space.
2019-08-28lint: Log diagnostics with 'info', not 'warning'.Ludovic Courtès
* guix/scripts/lint.scm (emit-warnings): Use 'info', not 'warning'. This removes the unhelpful "warning:" prefix that commit 3d33c93cef67d88bdc9409959f3c1f3857af09cf introduced.
2019-08-28gnu: Add cedille.John Soo
* gnu/packages/cedille.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-08-28gnu: agda-ial: Fix install step.John Soo
* gnu/packages/agda.scm (agda-ial): copy library and agdai files when installing. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-08-28swh: Correctly handle visits without a snapshot.Ludovic Courtès
As discussed at <https://sympa.inria.fr/sympa/arc/swh-devel/2019-08/msg00016.html>. * guix/swh.scm (string*): New procedure. (<visit>)[snapshot-url]: Pass 'string*' as the conversion procedure. [status]: Pass 'string->symbol' as the conversion procedure. (visit-snapshot): Return #f when 'visit-snapshot-url' returns #f. (lookup-origin-revision): Filter to visits for which 'visit-snapshot-url' is true.
2019-08-28swh: 'swh-download' prints debugging info.Ludovic Courtès
* guix/git-download.scm (git-fetch): Print a message before calling 'swh-download'. * guix/swh.scm (swh-download): Add #:log-port. Write debugging messages to LOG-PORT.
2019-08-28gnu: Add rust-walkdir.Efraim Flashner
* gnu/packages/crates-io.scm (rust-walkdir): New variable.
2019-08-28gnu: Add rust-void.Efraim Flashner
* gnu/packages/crates-io.scm (rust-void): New variable.
2019-08-28gnu: Add rust-version-check.Efraim Flashner
* gnu/packages/crates-io.scm (rust-verison-check): New variable.
2019-08-28gnu: Add rust-untrusted.Efraim Flashner
* gnu/packages/crates-io.scm (rust-untrusted): New variable.
2019-08-28gnu: Add rust-ucd-trie.Efraim Flashner
* gnu/packages/crates-io.scm (rust-ucd-trie): New variable.
2019-08-28gnu: Add rust-typeable.Efraim Flashner
* gnu/packages/crates-io.scm (rust-typeable): New variable.
2019-08-28gnu: Add rust-try-lock.Efraim Flashner
* gnu/packages/crates-io.scm (rust-try-lock): New variable.
2019-08-28gnu: Add rust-try-from.Efraim Flashner
* gnu/packages/crates-io.scm (rust-try-from): New variable.
2019-08-28gnu: Add rust-traitobject.Efraim Flashner
* gnu/packages/crates-io.scm (rust-traitobject): New variable.
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