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2017-12-21Merge branch 'master' into core-updatesLeo Famulari
2017-12-21gnu: imagemagick: Update to 6.9.9-27.Leo Famulari
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-27.
2017-12-21gnu: gnupg: Update to 2.2.4.Leo Famulari
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.4.
2017-12-21gnu: weechat: Run tests.Tobias Geerinckx-Rice
* gnu/packages/irc.scm (weechat)[native-inputs]: Add cpputest. [arguments]: Add ‘-DENABLE_TESTS=ON’ to #:configure-flags. Add ‘disable-failing-tests’ phase to do just that. Run the others.
2017-12-21gnu: zstd: Disable unrelated format support.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (zstd)[arguments]: Add HAVE_LZMA=0 to
2017-12-21gnu: zstd: Update to 1.3.3.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (zstd): Update to 1.3.3.
2017-12-21gnu: gnupg@2.0: Superseded by the latest GnuPG.Leo Famulari
The 2.0 series of GnuPG will stop receiving upstream support on 2017-12-31. From the release announcement of GnuPG 2.2.0: "This release marks the start of a new long term support series to replace the 2.0.x series which will reach end-of-life on 2017-12-31." https://lists.gnupg.org/pipermail/gnupg-announce/2017q3/000413.html * gnu/packages/gnupg.scm (gnupg-2.0)[properties]: New field.
2017-12-21gnu: libxslt: Fix CVE-2017-5029 and re-apply the fix for CVE-2016-4738.Leo Famulari
This is a followup to commit 2663c38826cd6c2ef0c5119f8072fac8e89b2e9b. * gnu/packages/xml.scm (libxslt)[replacement]: New field. (libxslt/fixed): New variable. * gnu/packages/patches/libxslt-CVE-2017-5029.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2017-12-21gnu: libarchive: Fix CVE-2017-14502.Leo Famulari
* gnu/packages/patches/libarchive-CVE-2017-14502.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/backup.scm (libarchive-3.3.2)[source]: Use it.
2017-12-21gnu: perl-libtime-parsedate: Comment out #:disallowed-references.Ludovic Courtès
This was introduced in commit f9c3bd2e0183b777ad3794674a360222c62633b0 but was not supported. * gnu/packages/perl.scm (perl-libtime-parsedate)[arguments]: Comment out #:disallowed-references.
2017-12-21build-system/gnu: Check whether the cross-libc has a "static" output.Ludovic Courtès
This is a followup to 614fffe4270cef308573a6d9cef650f3972875af, which broke cross-compilation to i686-w64-mingw32. * guix/build-system/gnu.scm (standard-cross-packages): Add "cross-libc:static" only when LIBC has a "static" output.
2017-12-21gnu: Add python-tempdir.Konrad Hinsen
* gnu/packages/python.scm (python-tempdir, python2-tempdir): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-21gnu: libexif: Fix CVE-2017-7544.Leo Famulari
* gnu/packages/patches/libexif-CVE-2017-7544.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/photo.scm (feh)[source]: Use it.
2017-12-21gnu: xboing: Fix CVE-2004-0149.Efraim Flashner
* gnu/packages/patches/xboing-CVE-2004-0149: New file. * gnu/packages/games.scm (xboing)[source]: Add patch. * gnu/local.mk (dist_patch_DATA): Register it.
2017-12-21gnu: mupdf: Update to 1.12.0 [fixes CVE-2017-15369].Leo Famulari
* gnu/packages/pdf.scm (mupdf): Update to 1.12.0. [source]: Remove obsolete patches. [inputs]: Add freeglut. * gnu/packages/patches/mupdf-CVE-2017-14685.patch, gnu/packages/patches/mupdf-CVE-2017-14686.patch, gnu/packages/patches/mupdf-CVE-2017-14687.patch, gnu/packages/patches/mupdf-CVE-2017-15587.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/patches/mupdf-build-with-openjpeg-2.1.patch: Update and rename to... * gnu/packages/patches/mupdf-build-with-latest-openjpeg.patch: ... new file.
2017-12-21gnu: weechat: Update to 2.0.1.Tobias Geerinckx-Rice
* gnu/packages/irc.scm (weechat): Update to 2.0.1.
2017-12-21gnu: Add perl-test-requiresinternet.Tobias Geerinckx-Rice
* gnu/packages/perl-check.scm (perl-test-requiresinternet): New public variable.
2017-12-20gnu: links: Fix-CVE-2017-11114.Leo Famulari
* gnu/packages/patches/links-CVE-2017-11114.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/web-browsers.scm (links)[source]: Use it.
2017-12-20gnu: linux-libre: Update to 4.14.8.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.14.8. (%linux-libre-hash): Update hash.
2017-12-20gnu: linux-libre@4.9: Update to 4.9.71.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.71.
2017-12-20gnu: linux-libre@4.4: Update to 4.4.107.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.107.
2017-12-20gnu: diffutils: Fix Gnulib/getopt cross-compilation issue.Ludovic Courtès
Previously cross-compilation would fail: CC xvasprintf.o xstrtol-error.c:50:16: warning: 'struct rpl_option' declared inside parameter list int exit_status) ^ xstrtol-error.c: In function 'xstrtol_error': xstrtol-error.c:84:5: error: invalid use of undefined type 'struct rpl_option' * gnu/packages/patches/diffutils-getopt.patch: New file. * gnu/packages/base.scm (diffutils)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2017-12-20gnu: microscheme: Fix home page.Ricardo Wurmus
* gnu/packages/avr.scm (microscheme)[home-page]: Use GitHub project page. Fixes <https://bugs.gnu.org/29791>.
2017-12-20gnu: gpgme: Build with the latest GnuPG.Leo Famulari
* gnu/packages/gnupg.scm (gpgme)[inputs]: Use the latest gnupg package. [arguments]: Keep a reference to the gnupg package used for build.
2017-12-20gnu: gcc: Fix cross-compilation.Ludovic Courtès
Previously "guix build gcc@5 --target=TRIPLET" would fail like this: checking for exported symbols... /tmp/guix-build-gcc-5.5.0.drv-0/gcc-5.5.0/libcc1/configure: line 14531: -T: command not found yes checking for -rdynamic... /tmp/guix-build-gcc-5.5.0.drv-0/gcc-5.5.0/libcc1/configure: line 14541: -T: command not found no checking for library containing dlopen... -ldl checking for -fPIC -shared... yes configure: error: Building GCC with plugin support requires a host that supports -fPIC, -shared, -ldl and -rdynamic. * gnu/packages/gcc.scm (gcc-4.7)[maybe-target-tools]: Add "OBJDUMP". (gcc-5)[source](snippet, modules): New fields.
2017-12-20gnu: python-pygpgme: Use GnuPG 1 for the test suite.Leo Famulari
* gnu/packages/gnupg.scm (python-pygpgme, python2-pygpgme)[inputs]: Use gnupg-1 and make it a native-input.
2017-12-20gnu: libassuan: Update to 2.5.1.Leo Famulari
* gnu/packages/gnupg.scm (libassuan): Update to 2.5.1.
2017-12-20gnu: exim: Update to 4.90.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (exim): Update to 4.90.
2017-12-20build-system/gnu: Add the "static" output of libc in cross environments.Ludovic Courtès
Fixes a regression whereby the host libc.a would be missing when cross-compiling. This is a followup to commit 6dff905e51202bbdebbad8811b6509584d12a796. * guix/build-system/gnu.scm (standard-cross-packages): Add the "cross-libc:static".
2017-12-20gnu: rng-tools: Update to 6.1.Leo Famulari
Rng-tools development appears to have moved to GitHub [0]: "NOTE: The rng-tools project hasn't seen updates in some time, but is still in active use. To facilitate ongoing development, the rng-tools project is moved to here: https://github.com/nhorman/rng-tools" [0] https://sourceforge.net/p/gkernel/wiki/Home/ * gnu/packages/linux.scm (rng-tools): Update to 6.1. [source]: Use new upstream URL and give a descriptive file-name. [arguments]: Add a 'bootstrap' phase. [native-inputs]: Add autoconf, automake, and pkg-config. [inputs]: Add sysfsutils.
2017-12-20gnu: libressl: Update to 2.6.4.Rutger Helling
* gnu/packages/tls.scm (libressl): Update to 2.6.4. Signed-off-by: Leo Famulari <leo@famulari.name>
2017-12-20gnu: babl: Update to 0.1.38.Leo Famulari
* gnu/packages/gimp.scm (babl): Update to 0.1.38.
2017-12-19gnu: icu4c: Update to 60.2.Marius Bakke
* gnu/packages/icu4c.scm (icu4c): Update to 60.2.
2017-12-19gnu: gtk+: Update to 3.22.26.Marius Bakke
* gnu/packages/gtk.scm (gtk+): Update to 3.22.26.
2017-12-19gnu: harfbuzz: Update to 1.7.3.Marius Bakke
* gnu/packages/gtk.scm (harfbuzz): Update to 1.7.3.
2017-12-19gnu: webkitgtk: Update to 2.18.4 [fixes CVE-2017-{7156,13856,13866,13870}].Leo Famulari
* gnu/packages/webkit.scm (webkitgtk): Update to 2.18.4.
2017-12-19gnu: r-htmltable: Update to 1.11.0.Ricardo Wurmus
* gnu/packages/web.scm (r-htmltable): Update to 1.11.0. [propagated-inputs]: Add r-dplyr, r-htmltools, r-rstudioapi, and r-tidyr.
2017-12-19gnu: r-testthat: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-testthat): Update to 2.0.0. [propagated-inputs]: Add r-cli, r-rlang, and r-withr.
2017-12-19gnu: Add r-cli.Ricardo Wurmus
* gnu/packages/cran.scm (r-cli): New variable.
2017-12-19gnu: r-hardyweinberg: Update to 1.5.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.5.9. [propagated-inputs]: Add r-rsolnp.
2017-12-19gnu: Add r-rsolnp.Ricardo Wurmus
* gnu/packages/cran.scm (r-rsolnp): New variable.
2017-12-19gnu: Add r-truncnorm.Ricardo Wurmus
* gnu/packages/cran.scm (r-truncnorm): New variable.
2017-12-19gnu: r-curl: Update to 3.1.Ricardo Wurmus
* gnu/packages/web.scm (r-curl): Update to 3.1.
2017-12-19gnu: r-ade4: Update to 1.7-10.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-10. [propagated-inputs]: Add r-mass.
2017-12-19gnu: r-registry: Update to 0.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-registry): Update to 0.5.
2017-12-19gnu: r-iterators: Update to 1.0.9.Ricardo Wurmus
* gnu/packages/statistics.scm (r-iterators): Update to 1.0.9.
2017-12-19gnu: r-segmented: Update to 0.5-3.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-segmented): Update to 0.5-3.0.
2017-12-19gnu: r-rprojroot: Update to 1.3-1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rprojroot): Update to 1.3-1.
2017-12-19gnu: r-rcpparmadillo: Update to 0.8.300.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.8.300.1.0.
2017-12-19gnu: r-plotrix: Update to 3.7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7.
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