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2016-10-13gnu: ghostscript: Fix CVE-2013-5653 and CVE-2016-{7976,7978,7979,8602}.Mark H Weaver
* gnu/packages/patches/ghostscript-CVE-2013-5653.patch, gnu/packages/patches/ghostscript-CVE-2016-7976.patch, gnu/packages/patches/ghostscript-CVE-2016-7978.patch, gnu/packages/patches/ghostscript-CVE-2016-7979.patch, gnu/packages/patches/ghostscript-CVE-2016-8602.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/ghostscript.scm (ghostscript)[replacement]: New field. (ghostscript/fixed): New variable. (ghostscript/x): Inherit 'ghostscript/fixed'.
2016-10-12doc: Add guide on how to specify dependencies for Python packages.Hartmut Goebel
* doc/guix.texi (Python Modules): New sub-subsection "Specifying Dependencies". Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-10-12gnu: Add hdf4Thomas Danckaert
* gnu/packages/maths.scm (hdf4, hdf4-alt): New variables. * gnu/packages/patches/hdf4-reproducibility.patch: New file. * gnu/packages/patches/hdf4-shared-fortran.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Co-Authored-By: Jeremy Robst <jpro@bas.ac.uk> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-10-12build: Make 'assert-no-store-file-names' effective.Ludovic Courtès
Lack of '-E' made it useless. * Makefile.am (assert-no-store-file-names): Pass '-E' to grep. Add '--exclude' and '--exclude-dir' flags.
2016-10-12build: Arrange so temporary .go files are deleted upon SIGINT.Ludovic Courtès
* build-aux/compile-all.scm: Install SIGINT handler.
2016-10-12gnu: Add NFS related services.John Darrington
* gnu/services/nfs.scm (pipefs-service-type): New variable, (gss-service-type): New variable, (idmap-service-type) New variable. * doc/guix.texi (Network File System): New node.
2016-10-12gnu: mcelog: Update to 142.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (mcelog): Update to 142.
2016-10-12gnu: btrfs-progs: Update to 4.8.1.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.1.
2016-10-11gnu: icecat: Update to 45.3.0-gnu1-beta. Add fixes from Firefox ESR 45.4.0.Mark H Weaver
Includes fixes for CVE-2016-5250, CVE-2016-5257, CVE-2016-5261, CVE-2016-5270, CVE-2016-5272, CVE-2016-5274, CVE-2016-5276, CVE-2016-5277, CVE-2016-5278, CVE-2016-5280, CVE-2016-5281, and CVE-2016-5284. * gnu/packages/gnuzilla.scm (mozilla-patch): New procedure. (icecat): Update to 45.3.0-gnu1. [source]: Add alternate source URI for the beta release. Update patches. [inputs]: Replace 'sqlite' input with a customized sqlite with SQLITE_ENABLE_DBSTAT_VTAB support. [native-inputs]: Add 'which'. * gnu/packages/patches/icecat-avoid-bundled-includes.patch: Rename to... * gnu/packages/patches/icecat-avoid-bundled-libraries.patch: ... and adapt to version 45. * gnu/packages/patches/icecat-CVE-2016-2818-pt1.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt2.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt3.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt4.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt5.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt6.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt7.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt8.patch, gnu/packages/patches/icecat-CVE-2016-2818-pt9.patch, gnu/packages/patches/icecat-CVE-2016-2819.patch, gnu/packages/patches/icecat-CVE-2016-2821.patch, gnu/packages/patches/icecat-CVE-2016-2824.patch, gnu/packages/patches/icecat-CVE-2016-2828.patch, gnu/packages/patches/icecat-CVE-2016-2831.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Update accordingly.
2016-10-11gnu: redis: Update to 3.2.4.David Thompson
* gnu/packages/databases.scm (redis): Update to 3.2.4. [arguments]: Add LDFLAGS to #:make-flags to work around missing linker flag.
2016-10-11gnu: newt: Update source and home-page URLs.Leo Famulari
* gnu/packages/slang.scm (newt)[source]: Update URL. [home-page]: Update URL.
2016-10-11gnu: vsearch: Update to 2.3.0.Ben Woodcroft
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.3.0.
2016-10-11gnu: diamond: Update to 0.8.23.Ben Woodcroft
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.23.
2016-10-11Update e-mail address for ng0.ng0
* .mailmap: Update entries for ng0.
2016-10-11gnu: qemu: Patch CVE-2016-857{6,7,8}.Efraim Flashner
* gnu/packages/qemu.scm (qemu)[source]: Add patches. * gnu/packages/patches/qemu-CVE-2016-8576.patch, gnu/packages/patches/qemu-CVE-2016-8577.patch, gnu/packages/patches/qemu-CVE-2016-8578.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them.
2016-10-10gnu: Add infamous-plugins.Ricardo Wurmus
* gnu/packages/audio.scm (infamous-plugins): New variable.
2016-10-10grafts: Always make directories #o755.Ludovic Courtès
Fixes <http://bugs.gnu.org/22954>. Reported by Albin <albin@fripost.org> and Jeffrey Serio <serio.jeffrey@gmail.com>. * guix/build/graft.scm (mkdir-p*): New procedure. (rewrite-directory): Use it instead of 'mkdir-p'.
2016-10-10bournish: Add 'reboot' command.Ludovic Courtès
Suggested by Ricardo Wurmus. * guix/build/bournish.scm (reboot-command): New procedure. (%commands): Add it.
2016-10-10substitute: Make download messages more concise.Ludovic Courtès
'guix substitute' now displays 2 lines per download instead of 4. Suggested by Ricardo Wurmus. * guix/scripts/substitute.scm (assert-valid-narinfo): Have #:verbose? default to #f. Remove leading newline in message. (process-substitution): Display the URI rather than the store file name. Display two newlines after the substitution.
2016-10-10gnu: font-un: Update source uri.ng0
Fixes <http://bugs.gnu.org/22908>. * gnu/packages/fonts.scm (font-un)[source]: Update source uri.
2016-10-10gnu: man-pages: Update to 4.08.Tobias Geerinckx-Rice
* gnu/packages/man.scm (man-pages): Update to 4.08.
2016-10-10gnu: cmocka: Update to 1.1.0.Efraim Flashner
* gnu/packages/check.scm (cmocka): Update to 1.1.0.
2016-10-10gnu: cppcheck: Update to 1.76.Efraim Flashner
* gnu/packages/check.scm (cppcheck): Update to 1.76.
2016-10-10gnu: libuninameslist: Use 'modify-phases' syntax.Efraim Flashner
* gnu/packages/fontutils.scm (libuninameslist)[arguments]: Use 'modify-phases' syntax.
2016-10-10gnu: libuninameslist: Update to 20160701.Efraim Flashner
* gnu/packages/fontutils.scm (libuninameslist): Update to 20160701.
2016-10-10gnu: bash-completion: Update to 2.4.Efraim Flashner
* gnu/packages/bash.scm (bash-completion): Update to 2.4. [home-page]: Update to redirected home-page.
2016-10-10import: github: Add .love extension.Efraim Flashner
* guix/import/github.scm (find-extension): Add '.love' extension to the list of extensions checked.
2016-10-10gnu: obs: Update to 0.16.2.Efraim Flashner
* gnu/packages/video.scm (obs): Update to 0.16.2.
2016-10-10gnu: laby: Update source uri.Efraim Flashner
* gnu/packages/games.scm (laby)[source]: Use the publicly visible download uri.
2016-10-10gnu: Add gxtuner.Ricardo Wurmus
* gnu/packages/music.scm (gxtuner): New variable.
2016-10-10gnu: gnome: Add pinentry-gnome3 to gnomeChristopher Baines
* gnu/packages/gnome.scm (gnome)[propagated-inputs]: Add pinentry-gnome3. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-10-10gnu: Add pinentry-gnome3.Christopher Baines
* gnu/packages/gnupg.scm (pinentry-gnome3): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-10-10gnu: pinentry: Remove 'gpg2' from description.Christopher Baines
* gnu/package/gnupg.scm (pinentry-tty, pinentry-gtk2, pinentry-qt) [description]: The default in Guix is gpg, so only use this. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-10-09gnu: sane-backends: Update to 1.0.25.Al McElrath
* gnu/packages/scanner.scm (sane-backends): Update to 1.0.25. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-10-09gnu: wpa-supplicant: Update to 2.6.Marius Bakke
* gnu/packages/admin.scm (wpa-supplicant-minimal)[source]: Update to 2.6. Remove 'patches' field. * gnu/packages/patches/wpa-supplicant-CVE-2015-5310.patch, gnu/packages/patches/wpa-supplicant-CVE-2015-5314.patch, gnu/packages/patches/wpa-supplicant-CVE-2015-5315.patch, gnu/packages/patches/wpa-supplicant-CVE-2015-5316.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4476.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt1.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt2.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt3.patch, gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt4.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-10-09gnu: guile-ssh: Update to 0.10.1.Ludovic Courtès
* gnu/packages/ssh.scm (libssh-0.6): Remove. (guile-ssh): Update to 0.10.1. [inputs]: Use LIBSSH instead of LIBSSH-0.7.3. [arguments]: Remove #:configure-flags.
2016-10-09gnu: guile-ssh: Compile .scm files after patching them.Ludovic Courtès
Before this commit, the .go files were obtained by compiling the unpatched .scm files, so they would refer to libguile-ssh without its absolute file name. * gnu/packages/ssh.scm (guile-ssh)[arguments]: Move 'fix-libguile-ssh-file-name' before 'build'. Have it run "make install -C libguile-ssh" first.
2016-10-09gnu: guile-ssh: Use 'modify-phases'.Ludovic Courtès
* gnu/packages/ssh.scm (guile-ssh)[arguments]: Use 'modify-phases'.
2016-10-10gnu: gcj: Switch dejagnu test command.Efraim Flashner
* gnu/packages/gcc.scm (gcj)[arguments]: Switch the depreciated dejagnu command 'absolute' for the new testing command 'file normalize'.
2016-10-09gnu: lynx: Update to 2.8.9dev.9 and fix GnuTLS support.Kei Kebreau
* gnu/packages/lynx.scm (lynx): Update to 2.8.9dev.9. [arguments]: Append the path to the GnuTLS to "--with-gnutls=".
2016-10-09gnu: hexchat: Update to 2.12.2.Tobias Geerinckx-Rice
* gnu/packages/messaging.scm (hexchat): Update to 2.12.2.
2016-10-09gnu: vdirsyncer: Update to 0.13.1.Leo Famulari
* gnu/packages/dav.scm (vdirsyncer): Update to 0.13.1.
2016-10-09gnu: libupnp: Fix CVE-2016-6255.Leo Famulari
* gnu/packages/patches/libupnp-CVE-2016-6255.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/libupnp.scm (libupnp): Use it.
2016-10-09gnu: ardour: Update to 5.4.Ricardo Wurmus
* gnu/packages/audio.scm (ardour): Update to 5.4. [inputs]: Add libarchive.
2016-10-09gnu: Add gtkwave.Danny Milosavljevic
* gnu/packages/fpga.scm (gtkwave): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-10-09gnu: Add arachne-pnr.Danny Milosavljevic
* gnu/packages/fpga.scm (arachne-pnr): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-10-09gnu: Add icestorm.Danny Milosavljevic
* gnu/packages/fpga.scm (icestorm): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-10-09gnu: Add yosys.Danny Milosavljevic
* gnu/packages/fpga.scm (yosys): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-10-09gnu: Add iverilog.Danny Milosavljevic
* gnu/packages/fpga.scm (iverilog): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-10-09gnu: Add abc.Danny Milosavljevic
* gnu/packages/fpga.scm (abc): New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>