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2020-09-11gnu: Add r-forge.Peter Lo
* gnu/packages/cran.scm (r-forge): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: r-survminer: Update to 0.4.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-survminer): Update to 0.4.8.
2020-09-11gnu: Add r-survminer.Peter Lo
* gnu/packages/cran.scm (r-survminer): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-maxstat.Peter Lo
* gnu/packages/cran.scm (r-maxstat): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-exactranktests.Peter Lo
* gnu/packages/cran.scm (r-exactranktests): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-survmisc.Peter Lo
* gnu/packages/cran.scm (r-survmisc): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-kmsurv.Peter Lo
* gnu/packages/cran.scm (r-kmsurv): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-km-ci.Peter Lo
* gnu/packages/cran.scm (r-km-ci): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-transphylo.Antoine Côté
* gnu/packages/cran.scm (r-transphylo): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-laplacesdemon.Vinicius Monego
* gnu/packages/cran.scm (r-laplacesdemon): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: guitarix: Update to 0.41.0.Ricardo Wurmus
* gnu/packages/audio.scm (guitarix): Update to 0.41.0. [inputs]: Remove gtkmm-2 and gtk+-2; add gtkmm and gtk+. [native-inputs]: Add sassc. [arguments]: Do not use Python 2; remove phase "fix-boost-includes".
2020-09-11gnu: Add r-flexsurv.Peter Lo
* gnu/packages/cran.scm (r-flexsurv): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-muhaz.Peter Lo
* gnu/packages/cran.scm (r-muhaz): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add bschaffl.Ricardo Wurmus
* gnu/packages/music.scm (bschaffl): New variable.
2020-09-11gnu: Add praat.Julien Lepiller
* gnu/packages/language.scm (praat): New variable.
2020-09-11gnu: Add ttyebus-linux-module.Danny Milosavljevic
* gnu/packages/linux.scm (ttyebus-linux-module): New variable.
2020-09-10gnu: lv2lint: Update to 0.8.0.Alexandros Theodotou
* gnu/packages/audio.scm (lv2lint): Update to 0.8.0. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-10gnu: sherlock-lv2: Update to 0.24.0.Alexandros Theodotou
* gnu/packages/music.scm (sherlock-lv2): Update to 0.24.0. [inputs]: Add glu. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-10gnu: powertabeditor: Update to 2.0.0-alpha13.Ricardo Wurmus
* gnu/packages/music.scm (powertabeditor): Update to 2.0.0-alpha13.
2020-09-10gnu: bjumblr: Update to 1.4.2.Ricardo Wurmus
* gnu/packages/music.scm (bjumblr): Update to 1.4.2.
2020-09-10gnu: bchoppr: Update to 1.8.0.Ricardo Wurmus
* gnu/packages/music.scm (bchoppr): Update to 1.8.0.
2020-09-10tests: nfs: Improve "nfs-root-fs".Danny Milosavljevic
Follow-up to a1a39ed5a46044161a71cbe6931c7e3006a82ecb. * gnu/tests/nfs.scm (run-nfs-root-fs-test): Improve tests. (%test-nfs-root-fs)[description]: Modify.
2020-09-10gnu: Update synopsis for r-useful.Roel Janssen
* gnu/packages/cran.scm (r-useful): Update synopsis.
2020-09-10gnu: Move r-bisquerna.Roel Janssen
* gnu/packages/bioinformatics.scm (r-bisquerna): Move to ... * gnu/packages/cran.scm: ... here.
2020-09-10gnu: cuirass: Update to 0.0.1-44.00c7b4b.Mathieu Othacehe
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-44.00c7b4b.
2020-09-10tests: install: Fix gui-installed-desktop-os-encrypted test.Mathieu Othacehe
* gnu/tests/base.scm (run-basic-test): Add a 'desktop?' argument. Wait 30 seconds before trying to switch to TTY1 on desktop. * gnu/tests/install.scm (guided-installation-test): Use 512MiB of RAM and pass the desktop argument to "run-basic-test".
2020-09-10gnu: Add foo-yc20.Ricardo Wurmus
* gnu/packages/music.scm (foo-yc20): New variable.
2020-09-10gnu: armagetronad: Update to 0.2.9.0.1.Kei Kebreau
* gnu/packages/games.scm (armagetronad): Update to 0.2.9.0.1. [source]: Update URL. [native-inputs]: Add pkg-config.
2020-09-10gnu: Add python-hg-evolve.Tanguy Le Carrour
* gnu/packages/version-control.scm (python-hg-evolve): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-09-10bash completion: Restore completion for 'guix system', etc.Ludovic Courtès
Commit 538ca8dd65f0075cc65bcca18ed87f66a789290a introduced a second '_guix_complete_subcommand' function, shadowing the existing one, which broke sub-command completion for 'guix system', 'guix import', etc. * etc/completion/bash/guix: Distinguish between '_guix_complete_command' and '_guix_complete_subcommand'. Adjust users to call the right one.
2020-09-10scripts: Use 'define-command' and have 'guix help' use that.Ludovic Courtès
This changes 'guix help' to print a short synopsis for each command and to group commands by category. * guix/scripts.scm (synopsis, category): New variables. (define-command-categories, define-command): New macros. (%command-categories): New variable. * guix/ui.scm (<command>): New record type. (source-file-command): New procedure. (command-files): Return absolute file names. (commands): Return a list of <command> records. (show-guix-help)[display-commands, category-predicate]: New procedures. Display commands grouped in three categories. * guix/scripts/archive.scm (guix-archive): Use 'define-command'. * guix/scripts/authenticate.scm (guix-authenticate): Likewise. * guix/scripts/build.scm (guix-build): Likewise. * guix/scripts/challenge.scm (guix-challenge): Likewise. * guix/scripts/container.scm (guix-container): Likewise. * guix/scripts/copy.scm (guix-copy): Likewise. * guix/scripts/deploy.scm (guix-deploy): Likewise. * guix/scripts/describe.scm (guix-describe): Likewise. * guix/scripts/download.scm (guix-download): Likewise. * guix/scripts/edit.scm (guix-edit): Likewise. * guix/scripts/environment.scm (guix-environment): Likewise. * guix/scripts/gc.scm (guix-gc): Likewise. * guix/scripts/git.scm (guix-git): Likewise. * guix/scripts/graph.scm (guix-graph): Likewise. * guix/scripts/hash.scm (guix-hash): Likewise. * guix/scripts/import.scm (guix-import): Likewise. * guix/scripts/install.scm (guix-install): Likewise. * guix/scripts/lint.scm (guix-lint): Likewise. * guix/scripts/offload.scm (guix-offload): Likewise. * guix/scripts/pack.scm (guix-pack): Likewise. * guix/scripts/package.scm (guix-package): Likewise. * guix/scripts/perform-download.scm (guix-perform-download): Likewise. * guix/scripts/processes.scm (guix-processes): Likewise. * guix/scripts/publish.scm (guix-publish): Likewise. * guix/scripts/pull.scm (guix-pull): Likewise. * guix/scripts/refresh.scm (guix-refresh): Likewise. * guix/scripts/remove.scm (guix-remove): Likewise. * guix/scripts/repl.scm (guix-repl): Likewise. * guix/scripts/search.scm (guix-search): Likewise. * guix/scripts/show.scm (guix-show): Likewise. * guix/scripts/size.scm (guix-size): Likewise. * guix/scripts/substitute.scm (guix-substitute): Likewise. * guix/scripts/system.scm (guix-system): Likewise. * guix/scripts/time-machine.scm (guix-time-machine): Likewise. * guix/scripts/upgrade.scm (guix-upgrade): Likewise. * guix/scripts/weather.scm (guix-weather): Likewise.
2020-09-10ui: '--help' output links to <https://guix.gnu.org/help/>.Ludovic Courtès
* guix/ui.scm (show-bug-report-information): Link to <https://guix.gnu.org/help/> instead of <https://www.gnu.org/gethelp/>. The former is much more useful and includes links to GNU manuals.
2020-09-10gnu: gcc-toolchain: Make "gcc" a "deprecated" alias for "gcc-toolchain".Ludovic Courtès
Fixes <https://bugs.gnu.org/43303>. Reported by Jeffrey Walton <noloader@gmail.com>. * gnu/packages/commencement.scm (gcc-toolchain-aka-gcc): New variable.
2020-09-10gnu: Add fdroidcl.Sergey Trofimov
* gnu/packages/android (fdroidcl): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-09-10services: php-fpm: Add 'php-ini-file' configuration.Jelle Licht
* gnu/services/web.scm: (<php-fpm-configuration>)[php-ini-file]: New record field. (php-fpm-shepherd-service): Use it. * doc/guix.texi (Web Services): Document it.
2020-09-10installer: final: Introduce call-with-mnt-container.Mathieu Othacehe
* gnu/installer/final.scm (call-with-mnt-container): New procedure, (install-system): use it instead of call-with-container, to make sure that the container is not jailed.
2020-09-10build: linux-container: Fix run-container.Mathieu Othacehe
This is a follow-up of 5316dfc0f125b658e4a2acf7f00f49501663d943. Some users of run-container may expect that the container is jailed, even if there are no mounts. This is the case for some Guix tests. * gnu/build/linux-container.scm (run-container): Do not jail the container when the requested root is "/".
2020-09-10gnu: Add loko-scheme.Martin Becze
* gnu/packages/loko.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-09-10gnu: Add guile-laesare.Martin Becze
* gnu/packages/guile-xyz.scm (guile-laesare): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-09-10gnu: Add guile-machine-code.Martin Becze
* gnu/packages/guile-xyz.scm (guile-machine-code): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-09-10gnu: Add guile-struct-pack.Martin Becze
* gnu/packages/guile-xyz.scm (guile-struct-pack): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-09-10gnu: libcap-ng: Update to 0.8.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (libcap-ng): Update to 0.8.
2020-09-10gnu: burp: Update to 2.3.34 [security fixes].Tobias Geerinckx-Rice
* gnu/packages/backup.scm (burp): Update to 2.3.34.
2020-09-10gnu: snd: Update to 20.7.Tobias Geerinckx-Rice
* gnu/packages/audio.scm (snd): Update to 20.7.
2020-09-10gnu: fasm: Update to 1.73.25.Tobias Geerinckx-Rice
* gnu/packages/assembly.scm (fasm): Update to 1.73.25.
2020-09-09gnu: starfighter: Update to 2.3.2.Kei Kebreau
* gnu/packages/games.scm (starfighter): Update to 2.3.2.
2020-09-09gnu: retux: Update to 1.4.Kei Kebreau
* gnu/packages/games.scm (retux): Update to 1.4. [source, home-page]: Update URLs. [arguments]: Update 'install phase.
2020-09-09gnu: python-xsge: Update to 2020.09.07.Kei Kebreau
* gnu/packages/game-development.scm (python-xsge): Update to 2020.09.07. [native-inputs]: Add unzip. [propagated-inputs]: Remove python-game, python-six, and python-tmx. Use python-sge instead of python-sge-pygame. [home-page]: Update URL. (python2-xsge): Remove unsupported Python 2 variant.
2020-09-09gnu: python-sge: Update to 1.7.Kei Kebreau
* gnu/packages/game-development.scm (python-sge-pygame): Define as deprecated alias for python-sge. (python2-sge-pygame): Remove unsupported Python 2 variant. (python-sge)[source]: Use pypi-uri. [propagated-inputs]: Remove python-six. [home-page]: Update URL.
2020-09-09gnu: python-file: Shrink synopsis.Ludovic Courtès
* gnu/packages/python-xyz.scm (python-file)[synopsis]: Reduce to a few words. [description]: Adjust to include bit about 'python-magic' and 'magic.py'.