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2017-12-19gnu: icu4c: Update to 60.2.Marius Bakke
* gnu/packages/icu4c.scm (icu4c): Update to 60.2.
2017-12-19gnu: gtk+: Update to 3.22.26.Marius Bakke
* gnu/packages/gtk.scm (gtk+): Update to 3.22.26.
2017-12-19gnu: harfbuzz: Update to 1.7.3.Marius Bakke
* gnu/packages/gtk.scm (harfbuzz): Update to 1.7.3.
2017-12-19gnu: Remove redundant cmake libdir configure flags.Efraim Flashner
* gnu/packages/bioinformatics.scm (imp)[arguments]: Remove CMAKE_INSTALL_LIBDIR flag. * gnu/packages/calendar.scm (libical): Same. * gnu/packages/engineering.scm (kicad): Same. * gnu/packages/games.scm (openrct2, mgba): Same. * gnu/packages/gl.scm (virtualgl): Same. * gnu/packages/image-processing.scm (mia): Same. * gnu/packages/linux.scm (rdma-core): Same. * gnu/packages/machine-learning.scm (dlib): Same. * gnu/packages/maths.scm (lapack, superlu, z3): Same. * gnu/packages/password-utils.scm (keepassxc): Same. * gnu/packages/photo.scm (darktable): Same. * gnu/packages/rdesktop.scm (freerdp): Same.
2017-12-19guix: cmake-build-system: Install libraries to /lib.Efraim Flashner
* guix/build/cmake-build-system.scm (configure): Add flag to always install libraries in /lib.
2017-12-19gnu: ruby: Remove graft for 2.4.3.Marius Bakke
* gnu/packages/ruby.scm (ruby): Update to 2.4.3. (ruby-2.4.3): Remove variable.
2017-12-19gnu: openssl: Remove graft for 1.0.2n.Marius Bakke
* gnu/packages/tls.scm (openssl): Update to 1.0.2n. (openssl-1.0.2n): Remove variable.
2017-12-19Merge branch 'master' into core-updatesMarius Bakke
2017-12-19gnu: termite: Update to 13.Marius Bakke
* gnu/packages/terminals.scm (termite): Update to 13.
2017-12-19gnu: pcsc-lite: Update to 1.8.23.Marius Bakke
* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.23. [arguments]<#:configure-flags>: Add "--disable-libsystemd". [license]: Adjust to removed sd-daemon files.
2017-12-19gnu: qemu: Update to 2.10.2.Marius Bakke
* gnu/packages/patches/qemu-CVE-2017-15118.patch, gnu/packages/patches/qemu-CVE-2017-15119.patch, gnu/packages/patches/qemu-CVE-2017-15268.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/virtualization.scm (qemu): Update to 2.10.2. [source](patches): Remove obsolete.
2017-12-19gnu: libdrm: Update to 2.4.89.Marius Bakke
* gnu/packages/xdisorg.scm (libdrm): Update to 2.4.89.
2017-12-18gnu: libjpeg-turbo: Update to 1.5.3.Marius Bakke
* gnu/packages/image.scm (libjpeg-turbo): Update to 1.5.3.
2017-12-18gnu: libsodium: Update to 1.0.16.Marius Bakke
* gnu/packages/crypto.scm (libsodium): Update to 1.0.16.
2017-12-18gnu: expect: Update to 5.45.3.Marius Bakke
* gnu/packages/tcl.scm (expect): Update to 5.45.3.
2017-12-18gnu: deutex: Update to 5.1.0.Kei Kebreau
* gnu/packages/games.scm (deutex): Update to 5.1.0.
2017-12-18doc: Clarify treatment of the root account.Ludovic Courtès
* doc/guix.texi (operating-system Reference): Clarify the situation of UID 0.
2017-12-18guix gc: '--verify=foo' is reported as an error.Ludovic Courtès
Fixes <https://bugs.gnu.org/29761>. Reported by Martin Castillo <castilma@uni-bremen.de>. * guix/scripts/gc.scm (argument->verify-options): New procedure. (%options) ["verify"]: Adjust to use it. * tests/guix-gc.sh: Add test.
2017-12-18gnu: emacspeak: Update to 47.0.Kei Kebreau
* gnu/packages/emacs.scm (emacspeak): Update to 47.0. [source]: Remove snippet. [arguments]: Set SHELL environment variable.
2017-12-18gnu: rsync: Patch CVE-2017-{16548,17433,17434}.Efraim Flashner
* gnu/packages/rsync.scm (rsync)[source]: Add patches. [properties]: Mark CVE-2017-15994 as not relevant. * gnu/packages/patches/rsync-CVE-2017-16548.patch, gnu/packages/patches/rsync-CVE-2017-17433.patch, gnu/packages/patches/rsync-CVE-2017-17433-fix-tests.patch, gnu/packages/patches/rsync-CVE-2017-17434-pt1.patch, gnu/packages/patches/rsync-CVE-2017-17434-pt2.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them.
2017-12-18gnu: psm: Update home page URL.Ludovic Courtès
* gnu/packages/linux.scm (psm)[home-page]: Update. [source](uri): Use it.
2017-12-18gexp: 'computed-file' has a new #:guile parameter.Ludovic Courtès
* guix/gexp.scm (<computed-file>)[guile]: New field. (computed-file): Add #:guile. (computed-file-compiler): Honor 'guile'.
2017-12-18gnu: Fix ambiguous 'zip' reference.Ludovic Courtès
* gnu/packages/photo.scm: Hide 'zip' from (srfi srfi-1).
2017-12-18ui: Non-zero exit for compound '&message' and '&error-location' conditions.Ludovic Courtès
* guix/ui.scm (call-with-error-handling): When both 'message?' and 'error-location?' are true, add call to 'exit'.
2017-12-18system: examples: Add a template for BeagleBone Black.Mathieu Othacehe
* gnu/system/examples/beaglebone-black.tmpl: New file. * Makefile.am (EXAMPLES): Add it. * gnu/system/install.scm (/etc/configuration-files): Add it.
2017-12-18gnu: claws-mail: Update to 3.16.0.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (claws-mail): Update to 3.16.0.
2017-12-18services: nginx: Allow to add raw content to the server blocks.Clément Lassieur
* doc/guix.texi (Web Services): Document 'raw-content'. * gnu/services/web.scm (<nginx-server-configuration>)[raw-content]: New field. (emit-nginx-server-config): Add it.
2017-12-18services: nginx: Replace 'http-port' and 'https-port' with 'listen'.Clément Lassieur
* doc/guix.texi (Web Services, Version Control Services): Update accordingly. * gnu/services/certbot.scm (certbot-nginx-server-configurations): Likewise. * gnu/services/version-control.scm (%cgit-configuration-nginx): Likewise. * gnu/services/web.scm (<nginx-server-configuration>, emit-nginx-server-config): Likewise. * gnu/tests/version-control.scm (%cgit-configuration-nginx, %git-nginx-configuration): Likewise. * gnu/tests/web.scm (%nginx-servers, %php-fpm-nginx-server-blocks): Likewise.
2017-12-18gnu: r-seurat: Update to 2.1.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.1.0. [propagated-inputs]: Add r-diffusionmap, r-dtw, r-ggjoy, r-hmisc, r-ica, r-mass, r-matrix, r-nmf, r-plotly, r-sdmtools, r-tidyr; remove r-plyr, r-rcppeigen, r-fastica.
2017-12-18gnu: Add r-diffusionmap.Ricardo Wurmus
* gnu/packages/graph.scm (r-diffusionmap): New variable.
2017-12-18gnu: Add r-ggjoy.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggjoy): New variable.
2017-12-18gnu: Add r-ggridges.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggridges): New variable.
2017-12-18gnu: Add r-scatterplot3d.Ricardo Wurmus
* gnu/packages/cran.scm (r-scatterplot3d): New variable.
2017-12-18gnu: Add r-sdmtools.Ricardo Wurmus
* gnu/packages/cran.scm (r-sdmtools): New variable.
2017-12-18gnu: Add r-dtw.Ricardo Wurmus
* gnu/packages/cran.scm (r-dtw): New variable.
2017-12-18gnu: Add r-ica.Ricardo Wurmus
* gnu/packages/cran.scm (r-ica): New variable.
2017-12-18gnu: r-seurat: Fix ModularityOptimizer.jar.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seurat)[arguments]: Include Main-Class attribute in manifest.
2017-12-18gnu: qmidiarp: Update to 0.6.5.Ricardo Wurmus
* gnu/packages/music.scm (qmidiarp): Update to 0.6.5.
2017-12-18gnu: Add noise-repellent.Ricardo Wurmus
* gnu/packages/audio.scm (noise-repellent): New variable.
2017-12-18gnu: Add aj-snapshot.Ricardo Wurmus
* gnu/packages/music.scm (aj-snapshot): New variable.
2017-12-18gnu: Add jack-capture.Ricardo Wurmus
* gnu/packages/music.scm (jack-capture): New variable.
2017-12-18gnu: Add qjackrcd.Ricardo Wurmus
* gnu/packages/audio.scm (qjackrcd): New variable.
2017-12-18gnu: Add whysynth.Ricardo Wurmus
* gnu/packages/music.scm (whysynth): New variable.
2017-12-18gnu: Add sonivox-eas.Ricardo Wurmus
* gnu/packages/music.scm (sonivox-eas): New variable.
2017-12-18doc: Fix typo.Martin Castillo
* doc/guix.texi: remove double occurence of generations. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-18nls: Update 'hu' translation.Ludovic Courtès
2017-12-18gnu: ncurses: Fix cross-compilation.Ludovic Courtès
This fixes a regression introduced in 667082d59104d4b964dce878f5e8c0f8ad1be958 whereby cross-compiling ncurses would fail. * gnu/packages/ncurses.scm (ncurses)[arguments]: In CONFIGURE-PHASE, get "rollup-patch" from NATIVE-INPUTS when cross-compiling.
2017-12-18vm: Pass the host's /dev/urandom to the guest at /dev/hwrng.Leo Famulari
* gnu/build/vm.scm (load-in-linux-vm): Use QEMU's virtio-rng-pci. * gnu/system/vm.scm (common-qemu-options): Likewise.
2017-12-17gnu: openssl: Update replacement to 1.0.2n [fixes CVE-2017-{3737,3738}].Mark H Weaver
* gnu/packages/tls.scm (openssl)[replacement]: Use openssl-1.0.2n. (openssl-1.0.2m): Replace with ... (openssl-1.0.2n): ... this updated version. Update comment.
2017-12-18gnu: retroarch: Enable Vulkan support.Rutger Helling
* gnu/packages/games.scm (retroarch)[arguments]: Hard-code the path to libvulkan.so. [inputs]: Add vulkan-icd-loader. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
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