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Fixes <https://issues.guix.gnu.org/24028>.
* gnu/packages/linux.scm (make-linux-libre*): Remove trailing #t.
[phases]{configure}: Set KBUILD_BUILD_USER and KBUILD_BUILD_HOST environment
variables.
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* gnu/packages/gnome.scm (nautilus): Upgrade to 41.0.
* gnu/packages/gnome.scm (nautilus) [arguments]: Use meson 0.59.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* gnu/packages/gnome.scm (gnome-autoar): Update to 0.4.1.
* gnu/packages/gnome.scm (gnome-autoar) [build-system]: Switch to meson.
* gnu/packages/gnome.scm (gnome-autoar) [native-inputs]: Add glib:bin for
glib-mkenums.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* gnu/packages/patches/gnome-session-support-elogind.patch: New file.
* gnu/local.mk: Add it.
* gnu/packages/gnome.scm (gnome-session)[source]: Use it.
[arguments]: Add "-Delogind=true" to #:configure-flags; remove
phases that patch in old-style elogind support.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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Update to commit 11bb04455 to integrate fixes related to new genext2fs and
e2fsprogs versions.
* gnu/packages/genimage.scm (genimage): Update to 14-1.11bb044.
[arguments]{fix-failing-tests}: Update it.
* gnu/packages/patches/genimage-mke2fs-test.patch: Update it.
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This is a follow-up to commit 664721422cd17c151df00b9ecab268d1aa18e3b3.
* gnu/packages/bioinformatics.scm (python-scanpy)[arguments]: Set PYTHONPATH
variable during the build as GUIX_PYTHONPATH does not have the intended
effect.
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* gnu/packages/bioinformatics.scm (python-scanpy): Update to 1.8.2.
[arguments]: Disable test_clustermap test.
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* gnu/packages/xfce.scm (xfce-weather-plugin)[inputs]: Replace libsoup with
libsoup-minimal-2.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/virtualization.scm (python-libvirt): Update to 7.9.0.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/python-xyz.scm (python-seaborn): Update to 0.11.2.
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More failing tests keep appearing sparingly, a few at a time. With the
following change, the build succeeded 20 rounds.
* gnu/packages/emacs-xyz.scm (emacs-elpy)
[phases]{disable-broken-tests}: Disable whole tests families affected by
nondeterministic failures rather than individual tests.
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* gnu/packages/bioinformatics.scm (perl-cworld-dekker)[arguments]: Use
GUIX_PYTHONPATH.
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* gnu/packages/bioinformatics.scm (python-scanpy)[arguments]: Use
GUIX_PYTHONPATH instead of PYTHONPATH.
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Numpy 1.20 is required by numba and umap-learn. Attempts to rename numpy 1.20
to allow it to coexist with numpy 1.21 in the same environment have not been
successful.
* gnu/packages/python-xyz.scm (python-numpy): Rename to...
(python-numpy-next): ...this variable.
(python2-numpy): Use python-numpy-next package as parent.
(python-numpy-1.20): Inherit from python-numpy-next.
(python-numpy): New variable pointing to python-numpy-1.20.
(python-numba)[propagated-inputs]: Replace python-numpy-1.20 with
python-numpy.
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* gnu/packages/bioinformatics.scm (multiqc)[arguments]: Delete 'sanity-check phase.
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* gnu/packages/bioinformatics.scm (multiqc)[arguments]: Replace PYTHONPATH
with GUIX_PYTHONPATH.
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* gnu/packages/video.scm (libmp4v2)[arguments]: Add #:configure-flags.
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* gnu/packages/python-xyz.scm (python-qtconsole)[propagated-inputs]: Add
PYTHON-PYQT.
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'qemu-minimal' is enough for system tests, which is the main (only?) use
of <virtual-machine>.
* gnu/system/vm.scm (<virtual-machine>)[qemu]: Default to QEMU-MINIMAL.
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* gnu/packages/networking.scm (tcp-wrappers)[source]: Add 'snippet'.
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* gnu/packages/game-development.scm (grafx2)[arguments]: Add '-fcommon'
to #:make-flags.
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Without a file name ending in ".tgz" (or similar), the 'unpack' phase
wouldn't extract it (as implemented in commit
cfcead2e515c0dae02127e5a76496463898be6b6).
* gnu/packages/game-development.scm (grafx2)[source]: Add 'file-name'
field.
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* gnu/packages/finance.scm (ledger)[source]: Add snippet to remove a failing
test.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
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* gnu/packages/radio.scm (sdrangel): Update to 6.17.3.
[arguments]: Add 'fix-boost-compatibility' phase.
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* gnu/packages/geo.scm (opencpn): Update to 5.2.4.
[arguments]: Update 'configure-flag' and 'fix-build' phase.
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* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.0.1.
[arguments]: Disable one failing network test.
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* gnu/packages/machine-learning.scm (python-scikit-learn)[arguments]: Respect
TESTS? in 'check phase.
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* gnu/packages/python-xyz.scm (python-joblib): Update to 1.1.0.
[arguments]: Disable one test.
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* gnu/packages/python-xyz.scm (python2-joblib)[version]: Explicitly set to
0.14.1.
[source]: Do not inherit.
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This change piggy backs on the improvements to the meson-build-system made in
dfcc96d8f48716ae5aefb383c58b153d5bcb407c; it's motivated by timeouts that
occurred in the GTK test suite while building on a heavily loaded machine.
* gnu/packages/gtk.scm (gtk)[parallel-tests]: New argument.
[test-options]: New argument, which now includes --suite=gtk and
--no-suite=gsk-compare-broadway, to match what upstream uses.
[phases]{check}: Remove override.
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* gnu/packages/networking.scm (libnice)
[phases]{disable-failing-test}: Rename to...
{disable-failing-tests}: ... this, plural. Disable 'test-bsd'.
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* gnu/packages/freedesktop.scm (wayland): Remove trailing #t.
[phases]: Use native-inputs unconditionally.
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* gnu/packages/gnome.scm (gnome-shell): Update to 41.0.
[origin]: Remove patches and modules fields.
[phases]{pre-check}: Set HOME.
* gnu/packages/patches/gnome-shell-disable-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): De-register it.
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* gnu/packages/gnome.scm (gsettings-desktop-schemas): Update to 41.0.
Reformat synopsis and description.
[origin]: Fix indentation.
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* gnu/packages/gnome.scm (gjs): Update to 1.70.0.
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* gnu/packages/gnome.scm (mutter): Update to 41.0.
[imported-modules, modules]: New arguments.
[configure-flags]: Specify the gles2_libname, egl_device and wayland_eglstream
options. Enable the profiler by removing the option.
[phases]{patch-dlopen-calls}: New phase.
{disable-problematic-tests}: Likewise.
{check}: Override phase.
[native-inputs]{xorg-server-for-tests}: Replace with...
{xvfb-run}: ... this.
{adwaita-icon-theme, libxcursor, pipewire-0.3}
{python-dbus, python-dbusmock, tini}: New native inputs.
[propagated-inputs]: Add libxcvt.
[inputs]: Add egl-wayland and sysprof.
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* gnu/packages/xorg.scm (libxcursor): Fix indentation.
[native-search-paths]: New field (previously commented). Update comment.
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* guix/build/syscalls.scm (PR_SET_CHILD_SUBREAPER): New variable.
(set-child-subreaper!): New procedure.
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* gnu/packages/python-xyz.scm (python-numba): Update to 0.54.1.
[propagated-inputs]: Replace python-numpy with python-numpy-1.20.
[arguments]: Add phase 'disable-failing-tests.
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* gnu/packages/python-xyz.scm (python-numba)[arguments]: Respect TESTS? argument.
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* gnu/packages/python-xyz.scm (python-numba)[arguments]: Remove trailing #T
from build phase.
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* gnu/packages/python-xyz.scm (python-numpy-1.20): New variable.
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* gnu/packages/jupyter.scm (repo2docker)[arguments]: Use GUIX_PYTHONPATH
instead of PYTHONPATH.
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* gnu/packages/llvm.scm (python-llvmlite): Update to 0.37.0.
[inputs]: Update patched LLVM.
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* gnu/packages/llvm.scm (python-llvmlite)[arguments]: Remove trailing #T from
build phases.
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* gnu/packages/machine-learning.scm (python-pytorch): Add comment.
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* gnu/packages/machine-learning.scm (python-pytorch)[propagated-inputs]: Add
python-click.
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* gnu/packages/machine-learning.scm (python-pytorch)[arguments]: Do not set
PYTHONPATH; use add-installed-pythonpath instead.
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* gnu/packages/networking.scm (opendht)[arguments]: Use GUIX_PYTHONPATH in the wrapper.
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* gnu/packages/patches/elogind-revert-polkit-detection.patch: New file.
* gnu/packages/freedesktop.scm (elogind): Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
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