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2023-05-05gnu: Add python-mysql-connector-python.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-mysql-connector-python): New variable.
2023-05-05gnu: Add protobuf-3.20.Ricardo Wurmus
* gnu/packages/protobuf.scm (protobuf-3.20): New variable.
2023-05-05gnu: Add python-palettable.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-palettable): New variable.
2023-05-05gnu: python-pyfaidx: Update to 0.7.2.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-pyfaidx): Update to 0.7.2.1. [build-system]: Use pyproject-build-system. [arguments]: Ignore tests that require large downloads. [native-inputs]: Remove python-six; add python-fsspec, python-pytest, python-pytest-cov, python-mock, and python-numpy.
2023-05-05news: Add 'de' translation.Florian Pelz
* etc/news.scm: Add German translation of 'with-configure-flag' entry.
2023-05-05gnu: python-sanic: Disable failing SSL tests.Lars-Dominik Braun
Best guess is that they check for broken behavior in one of the dependencies, which has changed. * gnu/packages/python-web.scm (python-sanic)[arguments]: Disable more tests.
2023-05-05gnu: python-gssapi: Update to 1.8.2.Lars-Dominik Braun
* gnu/packages/python-xyz.scm (python-gssapi): Update to 1.8.2. [native-inputs]: Add python-cython.
2023-05-05gnu: python-k5test: Update to 0.10.3.Lars-Dominik Braun
* gnu/packages/python-xyz.scm (python-k5test): Update to 0.10.3.
2023-05-05gnu: python-atpublic: Update to 3.1.1.Lars-Dominik Braun
* gnu/packages/python-check.scm (python-atpublic): Update to 3.1.1. [build-system]: Switch to pyproject-build-system. [arguments]: Remove #:phases, override build backend. [native-inputs]: Replace nose2 with pytest, add python-pdm-backend, python-sybil and python-pytest-cov.
2023-05-05gnu: Add python-pdm-backend.Lars-Dominik Braun
* gnu/packages/python-build.scm (python-pdm-backend): New variable.
2023-05-05gnu: guix: Update to dc5430c.Ludovic Courtès
* gnu/packages/package-management.scm (guix): Update to dc5430c.
2023-05-04gnu: python-fs: Remove indirect dependency on Rust when unsupported.Ludovic Courtès
This allows to build font-abattis-cantarell on aarch64-linux. * gnu/packages/python-xyz.scm (python-fs)[arguments]: Add #:tests?. [native-inputs]: Turn into the empty list when cross-compiling or when PYTHON-PYFTPDLIB is not supported.
2023-05-04gnu: psautohint: Remove unneeded dependencies.Ludovic Courtès
* gnu/packages/fontutils.scm (psautohint)[native-inputs]: Remove PYTHON-FS and PYTHON-PYTEST-RANDOMLY.
2023-05-04services: qemu-binfmt: Add more targets.Efraim Flashner
* gnu/services/virtualization.scm (%i486, %sparc64, %aarch64be, %xtensa, %xtensaeb, %microblaze, %microblazeel, %or1k, %hexagon, %loongson64): New variables. (%armeb): Correct family field. (%qemu-platforms): Add them.
2023-05-04services: earlyoom: Rotate log files.Efraim Flashner
* gnu/services/linux.scm (%earlyoom-log-rotation): New variable. (earlyoom-service-type): Add service-extension for log rotation.
2023-05-04gnu: vifm: Update to 0.13.Efraim Flashner
* gnu/packages/vim.scm (vifm): Update to 0.13. [arguments]: Adjust substitutions in custom 'patch-test-shebangs phase.
2023-05-04gnu: python-screed: Update to 1.1.2.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (python-screed): Update to 1.1.2. [build-system]: Use pyproject-build-system. [native-inputs]: Remove python-pytest. [inputs]: Remove python-bz2file. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2023-05-04gnu: Add python-goatools.Navid Afkhami
* gnu/packages/bioinformatics.scm (python-goatools): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2023-05-04gnu: Add r-rcircos.Navid Afkhami
* gnu/packages/cran.scm (r-rcircos): New variable.
2023-05-04build: Do not fail when '.git' is missing.Ludovic Courtès
This is a followup to a5d719012e0f5115aa89b767edc1fe1a3505915c. * Makefile.am (.git/hooks/pre-push): Add dash.
2023-05-04gnu: Add python-diff-cover.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-diff-cover): New variable.
2023-05-04gnu: Add python-loguru.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-loguru): New variable.
2023-05-04gnu: Add python-pytest-mypy-plugins.Ricardo Wurmus
* gnu/packages/check.scm (python-pytest-mypy-plugins): New variable.
2023-05-04gnu: Add python-chevron.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-chevron): New variable.
2023-05-04gnu: Add python-iteround.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-iteround): New variable.
2023-05-04build: Do not fail when 'git' is missing.Ludovic Courtès
This is a followup to 8b972da068708a8b17f3ab153ea940690ca49ca9. * Makefile.am (.git/config): Add dash.
2023-05-04gnu: airspyhf: Update to 1.6.8-1.40836c5.Guillaume Le Vaillant
* gnu/packages/radio.scm (airspyhf): Update to 1.6.8-1.40836c5.
2023-05-04gnu: linux-libre 5.15: Update to 5.15.110.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.110. (linux-libre-5.15-pristine-source): Update hash.
2023-05-04gnu: linux-libre 6.1: Update to 6.1.27.Leo Famulari
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.27. (linux-libre-6.1-pristine-source): Update hash.
2023-05-04gnu: linux-libre: Update to 6.2.14.Leo Famulari
* gnu/packages/linux.scm (linux-libre-6.2-version): Update to 6.2.14. (linux-libre-6.2-pristine-source): Update hash.
2023-05-04news: Add entry for '--with-configure-flag'.Ludovic Courtès
* etc/news.scm: Add entry.
2023-05-04transformations: Add '--with-configure-flag'.Sarthak Shah
* guix/transformations.scm (transform-package-configure-flag): New procedure. (%transformation-options, %transformation-options) (show-transformation-options-help/detailed): Add it. * tests/transformations.scm ("options->transformation, with-configure-flag"): New test. * doc/guix.texi (Package Transformation Options): Document it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2023-05-04gnu: sakura: Remove input labels.Ludovic Courtès
* gnu/packages/terminals.scm (sakura)[native-inputs]: Remove input labels.
2023-05-04gnu: peek: Remove input labels.Ludovic Courtès
* gnu/packages/video.scm (peek)[inputs, native-inputs]: Remove labels.
2023-05-04gnu: tint2: Remove input labels.Ludovic Courtès
* gnu/packages/xdisorg.scm (tint2)[native-inputs]: Remove input labels.
2023-05-04gnu: maim: Remove input labels.Ludovic Courtès
* gnu/packages/xdisorg.scm (maim)[inputs]: Remove labels.
2023-05-04gnu: armadillo: Remove input labels.Ludovic Courtès
* gnu/packages/maths.scm (armadillo)[inputs]: Remove labels.
2023-05-04style: Make 'safe' policy less conservative.Ludovic Courtès
Previously, a mere (arguments '(#:tests? #f)) would lead guix style -S inputs --input-simplification=safe to bail out. It now recognizes such trivial argument lists and proceeds. * guix/scripts/style.scm (trivial-package-arguments?): New procedure. (simplify-package-inputs): Use it in the 'safe case instead of 'null?'. * tests/style.scm ("input labels, 'safe' policy, trivial arguments"): New test.
2023-05-04gnu: vulkan-loader: Skip tests on riscv64-linux.Efraim Flashner
* gnu/packages/vulkan.scm (vulkan-loader)[arguments]: Skip tests when building on riscv64-linux.
2023-05-04gnu: exiv2: Adjust tests on riscv64-linux.Efraim Flashner
* gnu/packages/image.scm (exiv2)[arguments]: Also use the custom 'adjust-tests phase when building for riscv64-linux.
2023-05-04gnu: r-bigmemory: Remove several supported systems.Christopher Baines
Where the package consistently fails to build. * gnu/packages/statistics.scm (r-bigmemory)[supported-systems]: Remove armhf-linux, aarch64-linux and powerpc64le-linux.
2023-05-04gnu: gcc-11: Adapt patching for hurd to not use gexp's.Christopher Baines
As this causes issues with gcc-cross-boot0, since it doesn't use gexp's and that means the builder script ends up broken. I'm not testing this properly, I've only confirmed that with this change, you can generate a derivation for hello for i586-gnu where that derivation and all inputs don't have broken builder scripts. Plus the output for hello on x86_64-linux is unchanged. * gnu/packages/gcc.scm (gcc-11)[arguments]: Rewrite to not use gexps. [native-inputs]: Add a patch for the hurd if that's the target.
2023-05-04profiles: 'texlive-font-maps' gracefully handles lack of texlive inputs.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/63043>. * guix/profiles.scm (texlive-font-maps): Define 'texlive-inputs'. [build]: Use it. Return #f when TEXLIVE-INPUTS is empty.
2023-05-04import: elpa: Standardize warning message.Ludovic Courtès
* guix/import/elpa.scm (melpa-recipe->origin): Standardize warning message.
2023-05-04import: Cosmetic tweaks to 'recursive-import'.Ludovic Courtès
* guix/import/utils.scm (recursive-import): Tweak docstring. Simplify 'apply' call.
2023-05-04import: elpa: Use the expected repo in recursive imports.Ludovic Courtès
* guix/import/elpa.scm (elpa-recursive-import): Pass REPO in calls to 'elpa->guix-package'.
2023-05-04import: elpa: 'elpa->guix-package' accepts other keyword arguments.Ludovic Courtès
This is a followup to 3c24da4260f28b4ed57efda0296688a50ac94628. * guix/import/elpa.scm (elpa->guix-package): Add #:allow-other-keys.
2023-05-04gnu: dune-common: Skip tests that fail on aarch64-linux.Felix Gruber
* gnu/packages/patches/dune-common-skip-failing-tests.patch: New file. * gnu/packages/maths.scm (dune-common)[source]: Add it * gnu/local.mk (dist_patch_DATA): Register it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2023-05-04ftp-client: 'connect*' retries until the timeout has expired.Ludovic Courtès
Partly fixes <https://issues.guix.gnu.org/63024>. Reported by Greg Hogan <code@greghogan.com> and Timo Wilken <guix@twilken.net>. * guix/ftp-client.scm (connect*): When 'select' returns an empty set, try again until TIMEOUT has expired.
2023-05-03gnu: rdiff-backup: Update to 2.2.4.Eric Bavier
* gnu/packages/backup.scm (rdiff-backup): Update to 2.2.4. [inputs]: Add python-pyaml.
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