Age | Commit message (Collapse) | Author |
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* gnu/packages/commencement.scm (texinfo-boot0)[inputs]: Use
PERL-BOOT0.
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With this, a --rounds=2 build passes, and timestamps in POD files can be
controlled with 'SOURCE_DATE_EPOCH'.
* gnu/packages/patches/perl-deterministic-ordering.patch,
gnu/packages/patches/perl-no-build-time.patch,
gnu/packages/patches/perl-source-date-epoch.patch: New files.
* gnu/packages/perl.scm (perl)[source]: Use them.
* gnu-system.am (dist_patch_DATA): Add them.
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* gnu/packages/perl.scm (perl)[source]: Update to 5.22.0. Remove
"perl-module-pluggable-search.patch" since Module::Pluggable appears to
be gone.
[arguments] <configure-phase>: Adjust Cwd.pm file name. Replace
-std=c89 with -std=gnu89.
* gnu/packages/commencement.scm (perl-boot0): Add 'disable-pthreads'
phase.
* gnu/packages/patches/perl-no-sys-dirs.patch: Update.
* gnu/packages/patches/perl-module-pluggable-search.patch: Remove.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
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* gnu/packages/multiprecision.scm (gmp)[arguments]: Disable parallel tests.
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* gnu-system.am (dist_patch_DATA): Add glibc-hurd-extern-inline.patch
and plink-1.07-unclobber-i.patch.
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* gnu/packages/linux.scm (numactl)[source]: Update to 2.0.11.
[native-inputs]: Drop autotools.
[arguments]: Drop phase calling autogen.sh.
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* gnu/packages/wget.scm (wget): Update to 1.17.1.
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* gnu/packages/gcc.scm (gcc-4.7) <configure-flags>: Pass
'--with-system-zlib'.
* gnu/packages/commencement.scm (gcc-boot0)[arguments]: Remove
'--with-system-zlib' from the configure flags.
* gnu/packages/commencement.scm (zlib-final): New variable.
(gcc-final)[arguments]: Add ZLIB-FINAL to #:allowed-references.
Pass -L and -Wl,-rpath for zlib in LDFLAGS, as a configure flag.
[inputs]: Add LD-WRAPPER-BOOT3 and ZLIB-FINAL.
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* gnu/packages/commencement.scm (gcc-final)[arguments]: Remove
unnecessary CPPFLAGS from #:make-flags.
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* gnu/packages/crypto.scm (sparsehash): Move variable to...
* gnu/packages/datastructures.scm: ...new file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/statistics.scm (r-lattice): New variable.
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* gnu/packages/statistics.scm (r-gridbase): New variable.
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* gnu/packages/statistics.scm (r-plotrix): New variable.
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* gnu/packages/statistics.scm (r-readr): New variable.
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* gnu/packages/statistics.scm (r-data.table): Rename variable ...
(r-data-table): ... to this.
[description]: Clarify relation to data.frame.
[license]: Use correct license.
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* guix/import/cran.scm (description->alist, listify,
beautify-description, description->package): New procedures.
(table-datum, downloads->url, nodes->text, cran-sxml->sexp): Remove
proceduces.
(latest-release): Use parsed DESCRIPTION instead of SXML.
* tests/cran.scm: Rewrite to match importer.
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* guix/import/cran.scm (string->license): Match more license strings to
license symbols.
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* gnu/packages/bioinformatics.scm (snap-aligner): New variable.
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* gnu/packages/python.scm (python-certifi): Update to 2015.11.20.1.
[source]: Change to pypi syntax.
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* gnu/packages/gnome.scm (gnumeric): Do it.
[inputs]: Add python2, python2-pygobject-2.
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* gnu/packages/gnome.scm (gnumeric): Update to 1.12.24.
[inputs]: Add librsvg, libxslt.
[arguments]: Use "modify-phases" syntax.
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* gnu/packages/gnome.scm (goffice): Update to 0.10.24.
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* gnu/packages/gnome.scm (gvfs): Update to 1.26.2.
[inputs]: Add gcr.
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* emacs/guix-emacs.el (guix-emacs-autoloads-regexp): New variable.
(guix-emacs-find-autoloads-in-directory): Return a list of autoloads
without extensions.
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* gnu/packages/linux.scm (linux-libre): Update to 4.3.2.
[native-inputs]: Add openssl.
* gnu/packages/linux-libre-x86_64.conf,
gnu/packages/linux-libre-i686.conf: Update for 4.3.x,
based on <https://jxself.org/git/kernel-configs.git>.
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* gnu/packages/python.scm (python-requests): Update to 2.8.1.
[native-inputs]: Move python-setuptools here.
[inputs]: Remove python-certifi.
[propagated-inputs]: Add python-py, python-pytest, python-pytest-cov,
python-wheel.
[arguments]: Enable tests.
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* gnu/packages/python.scm (python-wheel, python2-wheel): New variables.
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* gnu/packages/python.scm (python-pytest-cov, python2-pytest-cov): New
variables.
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* gnu/packages/textutils.scm (libconfig): New variable.
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* gnu/packages/python.scm (python-pytz): Update to 2015.7.
[source]: Change uri to pypi's location.
[home-page]: Change to new website.
[license]: Change to expat.
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* gnu/packages/haskell.scm (ghc-cryptonite)[description]: Shorten overly
technical package description.
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* gnu/packages/bioinformatics.scm (python-biopython, python2-biopython): Update to 1.66.
[source]: Use PyPi instead of biopython.org.
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* gnu/packages/haskell.scm (ghc-pandoc): New variable.
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* gnu/packages/haskell.scm (ghc-http-client-tls): New variable.
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* gnu/packages/haskell.scm (ghc-connection): New variable.
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* gnu/packages/haskell.scm (ghc-socks): New variable.
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* gnu/packages/haskell.scm (ghc-tls): New variable.
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* gnu/packages/haskell.scm (ghc-x509-system): New variable.
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* gnu/packages/haskell.scm (ghc-x509-validation): New variable.
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* gnu/packages/haskell.scm (ghc-x509-store): New variable.
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* gnu/packages/haskell.scm (ghc-x509): New variable.
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* gnu/packages/haskell.scm (ghc-memory): New variable.
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* gnu/packages/haskell.scm (ghc-cryptonite): New variable.
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* gnu/packages/haskell.scm (ghc-tasty-kat): New variable.
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* gnu/packages/haskell.scm (ghc-asn1-parse): New variable.
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* gnu/packages/haskell.scm (ghc-asn1-encoding): New variable.
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* gnu/packages/haskell.scm (ghc-asn1-types): New variable.
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* gnu/packages/haskell.scm (ghc-pem): New variable.
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* gnu/packages/haskell.scm (ghc-hourglass): New variable.
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