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2019-03-07gnu: gcr: Update to 3.28.0.Ricardo Wurmus
* gnu/packages/patches/gcr-disable-failing-tests.patch, gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch: Remove files. * gnu/local.mk (dist_patch_DATA): Remove patches. * gnu/packages/gnome.scm (gcr): Update to 3.28.0. [arguments]: Add phase "disable-failing-tests"; rewrite "pre-check" phase. [native-inputs]: Add libxml2.
2019-03-07gnu: gnome-desktop: Update to 3.28.2.Ricardo Wurmus
* gnu/packages/gnome.scm (gnome-desktop): Update to 3.28.2. [inputs]: Add libseccomp.
2019-03-07gnu: libproxy: Remove network-manager.Ricardo Wurmus
This is necessary to break a dependency cycle. * gnu/packages/networking.scm (libproxy)[inputs]: Remove network-manager.
2019-03-07gnu: gnome-maps: Update to 3.28.2.Ricardo Wurmus
* gnu/packages/geo.scm (gnome-maps): Update to 3.28.2.
2019-03-07gnu: glibmm: Update to 2.56.0.Ricardo Wurmus
* gnu/packages/glib.scm (glibmm): Update to 2.56.0.
2019-03-07gnu: gedit: Use gtksourceview-3.Ricardo Wurmus
* gnu/packages/gnome.scm (gedit)[inputs]: Replace "gtksourceview" with "gtksourceview-3".
2019-03-07gnu: file-roller: Update to 3.28.0.Ricardo Wurmus
* gnu/packages/gnome.scm (file-roller): Update to 3.28.0. [build-system]: Use meson-build-system. [native-inputs]: Add desktop-file-utils, gtk+:bin, and glib:bin. [arguments]: Remove.
2019-03-07gnu: yelp-tools: Update to 3.28.0.Ricardo Wurmus
* gnu/packages/gnome.scm (yelp-tools): Update to 3.28.0.
2019-03-07gnu: yelp-xsl: Update to 3.28.0.Ricardo Wurmus
* gnu/packages/gnome.scm (yelp-xsl): Update to 3.28.0.
2019-03-07gnu: yelp: Update to 3.28.1.Ricardo Wurmus
* gnu/packages/gnome.scm (yelp): Update to 3.28.1.
2019-03-07gnu: at-spi2-core: Update to 2.28.0.Ricardo Wurmus
* gnu/packages/gtk.scm (at-spi2-core): Update to 2.28.0. [build-system]: Use meson-build-system. [arguments]: Adjust configure-flags; add build phases: set-documentation-path, prepare-doc-directory, move-documentation; move check phase after install. [native-inputs]: Add gtk-doc and glib:bin.
2019-03-07gnu: gtk-doc: Update to 1.28.Ricardo Wurmus
* gnu/packages/gtk.scm (gtk-doc): Update to 1.28.
2019-03-07gnu: Add gtksourceview-3.Ricardo Wurmus
* gnu/packages/gtk.scm (gtksourceview-3): New variable.
2019-03-07gnu: gtksourceview: Update to 4.0.2.Ricardo Wurmus
* gnu/packages/gtk.scm (gtksourceview): Update to 4.0.2.
2019-03-07gnu: vulkan-tools: Update to 1.1.102.Rutger Helling
* gnu/packages/vulkan.scm (vulkan-tools): Update to 1.1.102. [arguments]: Remove "-DBUILD_ICD=OFF" configure flag.
2019-03-06gnu: librsvg: Don't build librsvg-2.a.Marius Bakke
* gnu/packages/gnome.scm (librsvg)[arguments]: Add #:configure-flags.
2019-03-06gnu: valgrind: Update to 3.14.0.Marius Bakke
* gnu/packages/patches/valgrind-glibc-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/valgrind.scm (valgrind): Update to 3.14.0. [supported-systems]: Add mips64el-linux.
2019-03-06Merge branch 'master' into stagingMarius Bakke
2019-03-06gnu: python-mako: Update home page.Marius Bakke
* gnu/packages/python-xyz.scm (python-mako)[home-page]: Use HTTPS.
2019-03-06gnu: fuseiso: Fix typo.Marius Bakke
* gnu/packages/linux.scm (fuseiso)[synopsis]: s/imsages/images.
2019-03-06gnu: valgrind: Add download mirror.Marius Bakke
* gnu/packages/valgrind.scm (valgrind)[source](uri): Add mirror.
2019-03-06gnu: bismark: Update to 0.20.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bismark): Update to 0.20.1. [source]: Remove obsolete snippet. [arguments]: Add build phase "replace-plotly.js" and add requried modules; adjust "install" phase. [inputs]: Add perl-carp and perl-getopt-long. [native-inputs]: Add plotly.js and uglify-js.
2019-03-06gnu: Add fuseiso.Pierre Neidhardt
* gnu/packages/linux.scm (fuseiso): New variable.
2019-03-06gnu: Add r-scde.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-scde): New variable.
2019-03-06gnu: Add bowtie1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bowtie1): New variable.
2019-03-06gnu: octave, octave-cli: Update to 5.1.0.Kei Kebreau
* gnu/packages/maths.scm (octave, octave-cli): Update to 5.1.0.
2019-03-06gnu: crawl, crawl-tiles: Update to 0.23.1.Kei Kebreau
* gnu/packages/games.scm (crawl, crawl-tiles): Update to 0.23.1. [native-inputs]: Add python and python-pyyaml. [arguments]: Add 'patch-python' phase, modify the 'check' phase and move the 'check' phase back after the 'build' phase.
2019-03-06gnu: perl-czplib: Fix installation directory.Ricardo Wurmus
* gnu/packages/perl.scm (perl-czplib)[arguments]: Fix installation directory.
2019-03-06gnu: Add guile-studio.Ricardo Wurmus
* gnu/packages/guile-xyz.scm (guile-studio): New variable.
2019-03-06gnu: Add genrich.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (genrich): New variable.
2019-03-06gnu: r-dnacopy: Remove duplicate definition.Ricardo Wurmus
Reported by Christopher Baines <mail@cbaines.net>. * gnu/packages/bioinformatics.scm (r-dnacopy): Remove variable.
2019-03-06gnu: Add r-org-dr-eg-db.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-org-dr-eg-db): New variable.
2019-03-06gnu: java-eclipse-jdt-core: Update to 3.16.0.Ricardo Wurmus
* gnu/packages/java.scm (java-eclipse-jdt-core): Update to 3.16.0.
2019-03-06gnu: java-eclipse-core-resources: Update to 3.13.200.Ricardo Wurmus
* gnu/packages/java.scm (java-eclipse-core-resources): Update to 3.13.200.
2019-03-06gnu: java-eclipse-core-runtime: Update to 3.15.100.Ricardo Wurmus
* gnu/packages/java.scm (java-eclipse-core-runtime): Update to 3.15.100.
2019-03-06gnu: java-eclipse-equinox-common: Update to 3.10.200.Ricardo Wurmus
* gnu/packages/java.scm (java-eclipse-equinox-common): Update to 3.10.200.
2019-03-06gnu: vulkan-headers: Update to 1.1.102.Rutger Helling
* gnu/packages/vulkan.scm (vulkan-headers): Update to 1.1.102. * gnu/packages/vulkan.scm (vulkan-loader): Update hash. * gnu/packages/vulkan.scm (vulkan-tools): Update to 1.1.101. [arguments]: Add "-DBUILD_ICD=off" and "-DGLSLANG_INSTALL_DIR=" configure flags.
2019-03-06gnu: shaderc: Update to 2018.0.Rutger Helling
* gnu/packages/vulkan.scm (shaderc): Update to 2018.0.
2019-03-06gnu: spirv-tools: Update to 2019.1.Rutger Helling
* gnu/packages/vulkan.scm (spirv-tools): Update to 2019.1. [arguments]: Add 'fixgcc7 phase. [native-inputs]: Add gcc-7.
2019-03-06gnu: spirv-headers: Update to commit 8bea0a2.Rutger Helling
* gnu/packages/vulkan.scm (spirv-headers): Update to commit 8bea0a2.
2019-03-06gnu: glslang: Update to 7.11.3113.Rutger Helling
* gnu/packages/vulkan.scm (glslang): Update to 7.11.3113.
2019-03-05gnu: MPD: Update to 0.21.5.Leo Famulari
* gnu/packages/mpd.scm (mpd): Update to 0.21.5.
2019-03-05gnu: FFmpeg: Build with AV1 support.Arne Babenhauserheide
* gnu/packages/video.scm (ffmpeg)[inputs]: Add libaom. [arguments]: Pass '--enable-libaom' to #:configure-flags. (ffmpeg-3.4)[inputs, arguments]: Filter out libaom.
2019-03-05gnu: Add libaom.Arne Babenhauserheide
* gnu/packages/video.scm (libaom): New variable. Co-authored-by: Leo Famulari <leo@famulari.name>
2019-03-06gnu: you-get: Update to 0.4.1256.Tobias Geerinckx-Rice
* gnu/packages/video.scm (you-get): Update to 0.4.1256.
2019-03-06gnu: youtube-dl: Update to 2019.03.01.Tobias Geerinckx-Rice
* gnu/packages/video.scm (youtube-dl): Update to 2019.03.01.
2019-03-06gnu: plantuml: Update to 1.2019.2.Tobias Geerinckx-Rice
* gnu/packages/uml.scm (plantuml): Update to 1.2019.2.
2019-03-06gnu: xinit: Update to 1.4.1.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (xinit): Update to 1.4.1.
2019-03-06gnu: lxc: Fix documentation directory.Tobias Geerinckx-Rice
* gnu/packages/virtualization.scm (lxc)[arguments]: Set ‘--docdir’ in #:configure-flags.
2019-03-06gnu: lxc: Update to 3.1.0.Tobias Geerinckx-Rice
* gnu/packages/virtualization.scm (lxc): Update to 3.1.0.
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