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2020-01-09gnu: Add emacs-ebib.Paul Garlick
* gnu/packages/emacs-xyz.scm (emacs-ebib): New variable.
2020-01-09gnu: smithwaterman: Update to 0.0.0-2.2610e25.Efraim Flashner
* gnu/packages/bioinformatics.scm (smithwaterman): Update to 0.0.0-2.2610e25. [arguments]: Add make-flags to build static library. Adjust custom 'install phase to install static library.
2020-01-09gnu: vcflib: Update to 1.0.1.Efraim Flashner
* gnu/packages/bioinformatics.scm (vcflib): Update to 1.0.1. [source]: Download using url-fetch. [native-inputs]: Sort alphabetically. Move perl, python ... [inputs]: ... to here. [arguments]: Add make-flags. Update custom 'build phase. (tabixpp-freebayes): Remove variable. (freebayes)[native-inputs]: Use tabixpp-source over tabixpp-freebayes.
2020-01-09gnu: fastahack: Update to 1.0.0.Efraim Flashner
* gnu/packages/bioinformatics.scm (fastahack): Update to 1.0.0.
2020-01-09gnu: Add intervaltree.Efraim Flashner
* gnu/packages/bioinformatics.scm (intervaltree): New variable. (vcflib, freebayes)[native-inputs]: Use packaged intervaltree's source.
2020-01-09gnu: tabixpp: Update to 1.1.0.Efraim Flashner
* gnu/packages/bioinformatics.scm (tabixpp): Update to 1.1.0. [source]: Add snippet to remove vendored library. [arguments]: Adjust custom 'build phase to fix INCLUDES.
2020-01-09gnu: bwa: Install static library.Efraim Flashner
* gnu/packages/bioinformatics.scm (bwa)[arguments]: Install static library.
2020-01-09gnu: emacs-cyberpunk-theme: Update to 1.21.Pierre Neidhardt
* gnu/packages/emacs-xyz.scm (emacs-cyberpunk-theme): Update to 1.21.
2020-01-09gnu: emacs-helm-org: Update to 20191229.Pierre Neidhardt
* gnu/packages/emacs-xyz.scm (emacs-helm-org): Update to 20191229.
2020-01-08gnu: u-boot-2019.10: Remove obsolete version.Vagrant Cascadian
* gnu/packages/bootloaders (u-boot-2019.10): Remove variable. (u-boot-firefly-rk3399): Use default u-boot version. (u-boot-rockpro64-rk3399): Use default u-boot version. (u-boot-rock64-rk3328): Use default u-boot version. [arguments]: Remove add-u-boot-itb phase.
2020-01-08gnu: u-boot: Update to 2020.01.Vagrant Cascadian
* gnu/packages/bootloaders (u-boot): Update to 2020.01. [source]: Remove patch u-boot-fix-mkimage-header-verification. [native-inputs]: Update to use python 3 and add perl. (u-boot-tools)[configure]: Use tools-only_defconfig. [arguments]: Update phase updating python-coverage to work with python 3. Drop obsolete substitution for test_ofplatdata. Disable code coverage tests and binman tests. * gnu/packages/patches/u-boot-fix-mkimage-header-verification.patch: Remove file. * gnu/local.mk [dist_patch_DATA]: Update accordingly.
2020-01-08gnu: arm-trusted-firmware: Update to 2.2.Vagrant Cascadian
* gnu/packages/firmware (make-arm-trusted-firmware): Update to 2.2. [source]: Update URL. [homepage]: Update URL. * gnu/packages/patches/arm-trusted-firmware-optional-bin-generation.patch: Remove patch. * gnu/packages/patches/arm-trusted-firmware-rockchip-disable-binary.patch: Remove patch. * gnu/local.mk (dist_patch_DATA): Update accordingly.
2020-01-09gnu: system-config-printer: Update to 1.5.12.Oleg Pykhalov
* gnu/packages/gnome.scm (system-config-printer): Update to 1.5.12.
2020-01-09gnu: sysstat: Update to 12.3.1.Oleg Pykhalov
* gnu/packages/linux.scm (sysstat): Update to 12.3.1.
2020-01-09gnu: streamlink: Update to 1.3.0.Oleg Pykhalov
* gnu/packages/video.scm (streamlink): Update to 1.3.0. [source]: Remove patch. * gnu/local.mk (dist_patch_DATA): Remove this.
2020-01-09gnu: tigervnc-client: Update to 1.10.1.Oleg Pykhalov
* gnu/packages/tigervnc.scm (tigervnc-client): Update to 1.10.1. (tigervnc-server): Update to 1.10.1.
2020-01-09gnu: teeworlds: Fix install phase on i386 architecture.Oleg Pykhalov
* gnu/packages/games.scm (teeworlds)[arguments]: Fix install phase on i386 architecture.
2020-01-09gnu: font-iosevka: Update to 2.3.3.Tobias Geerinckx-Rice
* gnu/packages/fonts.scm (font-iosevka): Update to 2.3.3.
2020-01-09gnu: font-comic-neue: Add a note about versions.Tobias Geerinckx-Rice
* gnu/packages/fonts.scm (font-comic-neue): Add a comment about the ‘v2.4’ tag.
2020-01-09gnu: font-inconsolata: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/fonts.scm (font-inconsolata)[home-page]: Use HTTPS.
2020-01-09gnu: font-inconsolata: Update to 3.000.Tobias Geerinckx-Rice
* gnu/packages/fonts.scm (font-inconsolata): Update to 3.000. [source]: Fetch from the author's new repository.
2020-01-09gnu: font-ibm-plex: Update to 4.0.2.Tobias Geerinckx-Rice
* gnu/packages/fonts.scm (font-ibm-plex): Update to 4.0.2.
2020-01-09gnu: font-gnu-unifont: Update to 12.1.04.Tobias Geerinckx-Rice
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 12.1.04.
2020-01-09gnu: font-terminus: Update to 4.48.Tobias Geerinckx-Rice
* gnu/packages/fonts.scm (font-terminus): Update to 4.48.
2020-01-09gnu: font-lato: Update version number to 2.015.Tobias Geerinckx-Rice
Both the README and the Web site identify this as version 2.015. * gnu/packages/fonts.scm (font-lato)[version]: Correct.
2020-01-09gnu: mate-terminal: Update to 1.23.0.Tobias Geerinckx-Rice
* gnu/packages/mate.scm (mate-terminal): Update to 1.23.0.
2020-01-09gnu: mate-terminal: Don't use NAME in source URI.Tobias Geerinckx-Rice
* gnu/packages/mate.scm (mate-terminal)[source]: Hard-code NAME.
2020-01-09gnu: sdl2-image: Update to 2.0.5.Oleg Pykhalov
* gnu/packages/sdl.scm (sdl2-image): Update to 2.0.5.
2020-01-09gnu: s6-rc: Update to 0.5.1.1.Oleg Pykhalov
* gnu/packages/skarnet.scm (s6-rc): Update to 0.5.1.1.
2020-01-09gnu: s6-portable-utils: Update to 2.2.2.1.Oleg Pykhalov
* gnu/packages/skarnet.scm (s6-portable-utils): Update to 2.2.2.1.
2020-01-09gnu: s6-networking: Update to 2.3.1.1.Oleg Pykhalov
* gnu/packages/skarnet.scm (s6-networking): Update to 2.3.1.1.
2020-01-09gnu: s6-linux-utils: Update to 2.5.1.1.Oleg Pykhalov
* gnu/packages/skarnet.scm (s6-linux-utils): Update to 2.5.1.1.
2020-01-09gnu: s6-linux-init: Update to 1.0.3.1.Oleg Pykhalov
* gnu/packages/skarnet.scm (s6-linux-init)[version]: Update to 1.0.3.1. [inputs]: Add execline and s6. [arguments]: Add '--with-lib=' for execline and s6.
2020-01-09gnu: s6-dns: Update to 2.3.1.1.Oleg Pykhalov
* gnu/packages/skarnet.scm (s6-dns): Update to 2.3.1.1.
2020-01-09gnu: skalibs: Update to 2.9.1.0.Oleg Pykhalov
* gnu/packages/skarnet.scm (skalibs): Update to 2.9.1.0.
2020-01-09gnu: abiword: Update to 3.0.4.Oleg Pykhalov
* gnu/packages/abiword.scm (abiword): Update to 3.0.4. [source](patches): Remove "abiword-black-drawing-with-gtk322.patch" patch. Delete merged to upstream patch hunks in "abiword-explictly-cast-bools.patch" patch. * gnu/packages/patches/abiword-black-drawing-with-gtk322.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove this.
2020-01-09gnu: emacs-treemacs: Refactor "install-data" phase.Oleg Pykhalov
* gnu/packages/emacs-xyz.scm (emacs-treemacs)[arguments]: Refactor "install-data" phase.
2020-01-09gnu: util-linux: Rename udev variant.Marius Bakke
Some packages propagate util-linux, so make sure that that manifests and similar choose the same version to avoid conflicts. * gnu/packages/linux.scm (util-linux)[properties]: Remove. (util-linux+udev)[name]: Set to "util-linux-with-udev". [properties]: Remove.
2020-01-08services: nfs: Add nfs-service-type.Ricardo Wurmus
* gnu/services/nfs.scm (<nfs-configuration>): New record. (nfs-configuration, nfs-configuration?, nfs-configuration-nfs-utils, nfs-configuration-nfs-version, nfs-configuration-exports, nfs-configuration-rpcmountd-port, nfs-configuration-rpcstatd-port, nfs-configuration-rpcbind, nfs-configuration-idmap-domain, nfs-configuration-nfsd-port, nfs-configuration-nfsd-threads, nfs-configuration-pipefs-directory, nfs-configuration-debug, nfs-shepherd-services): New procedures. (nfs-service-type): New variable. * doc/guix.texi (Network File System): Document it. * gnu/tests/nfs.scm (%test-nfs-server): New variable. (%base-os): Use default value of rpcbind-service-type.
2020-01-08services: nfs: Allow gss-service-type to be extended.Ricardo Wurmus
* gnu/services/nfs.scm (gss-service-type): Rewrite using SERVICE-TYPE to add ability to extend the service.
2020-01-08services: nfs: Add verbosity control to idmap-service-type.Ricardo Wurmus
* gnu/services/nfs.scm (<idmap-configuration>)[verbosity]: New field. (idmap-configuration-verbosity): New procedure. (idmap-service-type): Use it. * doc/guix.texi (Network File System): Document it.
2020-01-08services: nfs: Allow idmap-service-type to be extended.Ricardo Wurmus
* gnu/services/nfs.scm (idmap-service-type): Rewrite using SERVICE-TYPE to add ability to extend the service.
2020-01-08services: nfs: Fix indentation and typo.Ricardo Wurmus
* gnu/services/nfs.scm (<gss-configuration>, <idmap-configuration>): Fix indentation. (<idmap-configuration>): Rename accessor for NFS-UTILS field to IDMAP-CONFIGURATION-NFS-UTILS. (idmap-service-type): Use IDMAP-CONFIGURATION-NFS-UTILS.
2020-01-08services: nfs: Allow pipefs-service-type to be extended.Ricardo Wurmus
* gnu/services/nfs.scm (pipefs-service-type): Rewrite using SERVICE-TYPE to add ability to extend the service.
2020-01-08services: nfs: Allow rpcbind-service-type to be extended.Ricardo Wurmus
* gnu/services/nfs.scm (rpcbind-service-type): Rewrite using SERVICE-TYPE to add ability to extend the service.
2020-01-08services: nfs: Fix name of package variable.Ricardo Wurmus
* gnu/services/nfs.scm (rpcbind-service-type): Correct name from nfs-utils to rpcbind.
2020-01-08git-authenticate: Add daviwil to the list of committers.Ludovic Courtès
This is a followup to a587bb23b79eae5dd3fa3acb06d0b533c93fd562, first commit signed by daviwil. * build-aux/git-authenticate.scm (%committers): Add "daviwil".
2020-01-08build-system/clojure: Provide only the right modules in scope.Ludovic Courtès
Previously, we used to have a whole bunch of (guix build *-build-system) modules in scope, which, for example, meant that '%standard-phases' was clashing. This change clarifies it. * guix/build-system/clojure.scm (%default-modules): New variable. (clojure-build): Change the default value of #:modules and that of #:phases.
2020-01-08gnu: Add clojure-tools-cli.Ludovic Courtès
* gnu/packages/clojure.scm (clojure-tools-cli): New variable.
2020-01-08system: Use the udev-enabled util-linux variant.Marius Bakke
Fixes <https://bugs.gnu.org/37931>. Reported by Bengt Richter <bokr@bokr.com>. * gnu/system.scm (%base-packages): Change from UTIL-LINUX to UTIL-LINUX+UDEV.
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